Protein–RNA interactions for Protein: P53146

USE1, Protein transport protein USE1, yeastyeast

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
USE1P53146 snR69snR69 101 nt-0.86□□□□□ -2.55
USE1P53146 YOR170WYOR170W 306 nt-0.86□□□□□ -2.55
USE1P53146 tM(CAU)Q2tM(CAU)Q2 78 nt-0.88□□□□□ -2.55
USE1P53146 snR33snR33 183 nt-0.88□□□□□ -2.55
USE1P53146 snR49snR49 165 nt-0.89□□□□□ -2.55
USE1P53146 tT(UGU)G1tT(UGU)G1 72 nt-0.91□□□□□ -2.56
USE1P53146 tT(UGU)G2tT(UGU)G2 72 nt-0.91□□□□□ -2.56
USE1P53146 tT(UGU)PtT(UGU)P 72 nt-0.91□□□□□ -2.56
USE1P53146 YGR146C-AYGR146C-A 162 nt-0.92□□□□□ -2.56
USE1P53146 YER090C-AYER090C-A 90 nt-0.94□□□□□ -2.56
USE1P53146 YNL097C-BYNL097C-B 123 nt-0.95□□□□□ -2.56
USE1P53146 snR39BsnR39B 96 nt-0.96□□□□□ -2.56
USE1P53146 RDS3YPR094W 324 nt-0.97□□□□□ -2.56
USE1P53146 PMP2YEL017C-A 132 nt-0.98□□□□□ -2.57
USE1P53146 snR65snR65 100 nt-0.99□□□□□ -2.57
USE1P53146 YOL155W-AYOL155W-A 135 nt-0.99□□□□□ -2.57
USE1P53146 YHR175W-AYHR175W-A 150 nt-1.01□□□□□ -2.57
USE1P53146 YNL266WYNL266W 420 nt-1.01□□□□□ -2.57
USE1P53146 YOR329W-AYOR329W-A 210 nt-1.02□□□□□ -2.57
USE1P53146 snR50snR50 90 nt-1.02□□□□□ -2.57
USE1P53146 YPL152W-AYPL152W-A 99 nt-1.04□□□□□ -2.58
USE1P53146 YOR302WYOR302W 78 nt-1.07□□□□□ -2.58
USE1P53146 tR(ACG)Q2tR(ACG)Q2 74 nt-1.11□□□□□ -2.59
USE1P53146 snR56snR56 88 nt-1.12□□□□□ -2.59
USE1P53146 JLP2YMR132C 627 nt-1.12□□□□□ -2.59
USE1P53146 tD(GUC)QtD(GUC)Q 75 nt-1.13□□□□□ -2.59
USE1P53146 snR161snR161 161 nt-1.15□□□□□ -2.59
USE1P53146 snR48snR48 113 nt-1.15□□□□□ -2.59
USE1P53146 YGL188C-AYGL188C-A 141 nt-1.18□□□□□ -2.6
USE1P53146 YLR286W-AYLR286W-A 135 nt-1.19□□□□□ -2.6
USE1P53146 YNL205CYNL205C 423 nt-1.19□□□□□ -2.6
USE1P53146 snR67snR67 82 nt-1.2□□□□□ -2.6
USE1P53146 YBR178WYBR178W 375 nt-1.24□□□□□ -2.61
USE1P53146 snR52snR52 92 nt-1.25□□□□□ -2.61
USE1P53146 YLR342W-AYLR342W-A 174 nt-1.26□□□□□ -2.61
USE1P53146 YDL159C-BYDL159C-B 177 nt-1.27□□□□□ -2.61
USE1P53146 YOR231C-AYOR231C-A 201 nt-1.27□□□□□ -2.61
USE1P53146 tL(UAA)QtL(UAA)Q 85 nt-1.28□□□□□ -2.61
USE1P53146 tP(UGG)QtP(UGG)Q 72 nt-1.28□□□□□ -2.61
USE1P53146 SKI7YOR076C 2244 nt-1.29□□□□□ -2.62
USE1P53146 YOR102WYOR102W 351 nt-1.29□□□□□ -2.62
USE1P53146 YDR524W-CYDR524W-C 90 nt-1.33□□□□□ -2.62
USE1P53146 YBR223W-AYBR223W-A 120 nt-1.33□□□□□ -2.62
USE1P53146 snR80snR80 171 nt-1.36□□□□□ -2.63
USE1P53146 YHL015W-AYHL015W-A 84 nt-1.39□□□□□ -2.63
USE1P53146 YLR299C-AYLR299C-A 93 nt-1.45□□□□□ -2.64
USE1P53146 YBR196C-AYBR196C-A 150 nt-1.48□□□□□ -2.65
USE1P53146 YML054C-AYML054C-A 159 nt-1.49□□□□□ -2.65
USE1P53146 YDR406W-AYDR406W-A 246 nt-1.57□□□□□ -2.66
USE1P53146 YNL198CYNL198C 303 nt-1.58□□□□□ -2.66
USE1P53146 tY(GUA)QtY(GUA)Q 84 nt-1.66□□□□□ -2.68
USE1P53146 CDC65tQ(CUG)M 72 nt-1.7□□□□□ -2.68
USE1P53146 YNR077CYNR077C 255 nt-1.7□□□□□ -2.68
USE1P53146 YGR240C-AYGR240C-A 201 nt-1.71□□□□□ -2.68
USE1P53146 SOM1YEL059C-A 225 nt-1.72□□□□□ -2.68
USE1P53146 YJL150WYJL150W 303 nt-1.72□□□□□ -2.68
USE1P53146 YHR180C-BYHR180C-B 105 nt-1.74□□□□□ -2.69
USE1P53146 snR77snR77 88 nt-1.75□□□□□ -2.69
USE1P53146 YBL053WYBL053W 375 nt-1.76□□□□□ -2.69
USE1P53146 YOR376W-AYOR376W-A 156 nt-1.78□□□□□ -2.69
USE1P53146 YCR095W-AYCR095W-A 159 nt-1.8□□□□□ -2.7
USE1P53146 YMR046W-AYMR046W-A 129 nt-1.85□□□□□ -2.71
USE1P53146 snR81snR81 201 nt-1.9□□□□□ -2.71
USE1P53146 YMR315W-AYMR315W-A 108 nt-1.93□□□□□ -2.72
USE1P53146 YOR316C-AYOR316C-A 210 nt-1.96□□□□□ -2.72
USE1P53146 YKL106C-AYKL106C-A 120 nt-1.97□□□□□ -2.72
USE1P53146 Q0142Q0142 177 nt-2□□□□□ -2.73
USE1P53146 SPG3YDR504C 384 nt-2.02□□□□□ -2.73
USE1P53146 YBR296C-AYBR296C-A 120 nt-2.04□□□□□ -2.74
USE1P53146 YBR109W-AYBR109W-A 225 nt-2.05□□□□□ -2.74
USE1P53146 RPL41AYDL184C 78 nt-2.07□□□□□ -2.74
USE1P53146 YGR151CYGR151C 336 nt-2.07□□□□□ -2.74
USE1P53146 tM(CAU)Q1tM(CAU)Q1 76 nt-2.13□□□□□ -2.75
USE1P53146 YOL083C-AYOL083C-A 141 nt-2.13□□□□□ -2.75
USE1P53146 YBL071C-BYBL071C-B 99 nt-2.15□□□□□ -2.75
USE1P53146 YOR309CYOR309C 381 nt-2.19□□□□□ -2.76
USE1P53146 snR38snR38 95 nt-2.19□□□□□ -2.76
USE1P53146 YOL164W-AYOL164W-A 183 nt-2.21□□□□□ -2.76
USE1P53146 YCL001W-BYCL001W-B 255 nt-2.22□□□□□ -2.76
USE1P53146 YLR466C-BYLR466C-B 117 nt-2.24□□□□□ -2.77
USE1P53146 YAL037C-AYAL037C-A 93 nt-2.26□□□□□ -2.77
USE1P53146 YBR126W-BYBR126W-B 144 nt-2.26□□□□□ -2.77
USE1P53146 snR47snR47 99 nt-2.34□□□□□ -2.78
USE1P53146 YBL100W-CYBL100W-C 120 nt-2.38□□□□□ -2.79
USE1P53146 YNL338WYNL338W 159 nt-2.39□□□□□ -2.79
USE1P53146 YNL337WYNL337W 255 nt-2.5□□□□□ -2.81
USE1P53146 snR6snR6 112 nt-2.56□□□□□ -2.82
USE1P53146 YKL225WYKL225W 348 nt-2.61□□□□□ -2.83
USE1P53146 tS(GCU)Q1tS(GCU)Q1 86 nt-2.64□□□□□ -2.83
USE1P53146 YOR335W-AYOR335W-A 81 nt-2.71□□□□□ -2.84
USE1P53146 Q0032Q0032 291 nt-2.75□□□□□ -2.85
USE1P53146 RPL41BYDL133C-A 78 nt-2.75□□□□□ -2.85
USE1P53146 YDL114W-AYDL114W-A 114 nt-2.76□□□□□ -2.85
USE1P53146 tV(UAC)QtV(UAC)Q 76 nt-2.76□□□□□ -2.85
USE1P53146 snR73snR73 106 nt-2.78□□□□□ -2.85
USE1P53146 YGL041C-BYGL041C-B 183 nt-2.82□□□□□ -2.86
USE1P53146 YGL007C-AYGL007C-A 87 nt-2.87□□□□□ -2.87
USE1P53146 snR61snR61 90 nt-2.88□□□□□ -2.87
USE1P53146 YNL103W-AYNL103W-A 90 nt-2.89□□□□□ -2.87
USE1P53146 YDR034C-AYDR034C-A 177 nt-2.9□□□□□ -2.87
Retrieved 100 of 7,029 protein–RNA pairs in 67 ms