Protein–RNA interactions for Protein: P53131

PRP43, Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43, yeastyeast

Known RBP Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP43P53131 HKR1YDR420W 5409 nt1.57□□□□□ -2.16
PRP43P53131 NST1YNL091W 3723 nt1.56□□□□□ -2.16
PRP43P53131 YPL060C-AYPL060C-A 3315 nt1.56□□□□□ -2.16
PRP43P53131 CDC39YCR093W 6327 nt1.56□□□□□ -2.16
PRP43P53131 EST2YLR318W 2655 nt1.55□□□□□ -2.16
PRP43P53131 YDL159C-BYDL159C-B 177 nt1.55□□□□□ -2.16
PRP43P53131 SEC3YER008C 4011 nt1.54□□□□□ -2.16
PRP43P53131 APL3YBL037W 3078 nt1.54□□□□□ -2.16
PRP43P53131 snR69snR69 101 nt1.53□□□□□ -2.16
PRP43P53131 YLR422WYLR422W 5799 nt1.53□□□□□ -2.16
PRP43P53131 YML054C-AYML054C-A 159 nt1.53□□□□□ -2.16
PRP43P53131 ULP2YIL031W 3105 nt1.53□□□□□ -2.17
PRP43P53131 PRP16YKR086W 3216 nt1.51□□□□□ -2.17
PRP43P53131 RPL41AYDL184C 78 nt1.5□□□□□ -2.17
PRP43P53131 SEC8YPR055W 3198 nt1.5□□□□□ -2.17
PRP43P53131 CSE1YGL238W 2883 nt1.49□□□□□ -2.17
PRP43P53131 NIP1YMR309C 2439 nt1.48□□□□□ -2.17
PRP43P53131 NUP188YML103C 4968 nt1.48□□□□□ -2.17
PRP43P53131 PAU12YGR294W 363 nt1.48□□□□□ -2.17
PRP43P53131 YHR180C-BYHR180C-B 105 nt1.48□□□□□ -2.17
PRP43P53131 PAU24YBR301W 363 nt1.48□□□□□ -2.17
PRP43P53131 SKI7YOR076C 2244 nt1.47□□□□□ -2.17
PRP43P53131 YBR296C-AYBR296C-A 120 nt1.47□□□□□ -2.17
PRP43P53131 YNL054W-BYNL054W-B 5250 nt1.47□□□□□ -2.17
PRP43P53131 UTP20YBL004W 7482 nt1.46□□□□□ -2.18
PRP43P53131 YGR122C-AYGR122C-A 129 nt1.45□□□□□ -2.18
PRP43P53131 SWI4YER111C 3282 nt1.44□□□□□ -2.18
PRP43P53131 SPT7YBR081C 3999 nt1.44□□□□□ -2.18
PRP43P53131 YLR399W-AYLR399W-A 105 nt1.44□□□□□ -2.18
PRP43P53131 RDS3YPR094W 324 nt1.44□□□□□ -2.18
PRP43P53131 YSP1YHR155W 3687 nt1.43□□□□□ -2.18
PRP43P53131 BUD3YCL014W 4911 nt1.37□□□□□ -2.19
PRP43P53131 NUP145YGL092W 3954 nt1.35□□□□□ -2.19
PRP43P53131 BEM2YER155C 6504 nt1.33□□□□□ -2.2
PRP43P53131 PET111YMR257C 2403 nt1.31□□□□□ -2.2
PRP43P53131 BUL2YML111W 2763 nt1.31□□□□□ -2.2
PRP43P53131 YLL006W-AYLL006W-A 177 nt1.3□□□□□ -2.2
PRP43P53131 YNL284C-BYNL284C-B 5268 nt1.29□□□□□ -2.2
PRP43P53131 LTE1YAL024C 4308 nt1.29□□□□□ -2.2
PRP43P53131 tQ(UUG)QtQ(UUG)Q 76 nt1.28□□□□□ -2.2
PRP43P53131 DOP1YDR141C 5097 nt1.26□□□□□ -2.21
PRP43P53131 tF(GAA)BtF(GAA)B 73 nt1.25□□□□□ -2.21
PRP43P53131 tF(GAA)FtF(GAA)F 73 nt1.25□□□□□ -2.21
PRP43P53131 tF(GAA)GtF(GAA)G 73 nt1.25□□□□□ -2.21
PRP43P53131 tF(GAA)H1tF(GAA)H1 73 nt1.25□□□□□ -2.21
PRP43P53131 tF(GAA)H2tF(GAA)H2 73 nt1.25□□□□□ -2.21
PRP43P53131 tF(GAA)MtF(GAA)M 73 nt1.25□□□□□ -2.21
PRP43P53131 tF(GAA)P1tF(GAA)P1 73 nt1.25□□□□□ -2.21
PRP43P53131 tF(GAA)P2tF(GAA)P2 73 nt1.25□□□□□ -2.21
PRP43P53131 YJL077W-AYJL077W-A 87 nt1.25□□□□□ -2.21
PRP43P53131 SCC2YDR180W 4482 nt1.22□□□□□ -2.21
PRP43P53131 YER090C-AYER090C-A 90 nt1.22□□□□□ -2.21
PRP43P53131 RKR1YMR247C 4689 nt1.19□□□□□ -2.22
PRP43P53131 VAM6YDL077C 3150 nt1.19□□□□□ -2.22
PRP43P53131 YOR192C-BYOR192C-B 5313 nt1.16□□□□□ -2.22
PRP43P53131 YJR029WYJR029W 5268 nt1.16□□□□□ -2.22
PRP43P53131 YPR137C-BYPR137C-B 5268 nt1.16□□□□□ -2.22
PRP43P53131 YMR160WYMR160W 2451 nt1.15□□□□□ -2.22
PRP43P53131 EMT1tM(CAU)D 73 nt1.13□□□□□ -2.23
PRP43P53131 EMT5tM(CAU)J1 73 nt1.13□□□□□ -2.23
PRP43P53131 EMT3tM(CAU)J2 73 nt1.13□□□□□ -2.23
PRP43P53131 EMT4tM(CAU)M 73 nt1.13□□□□□ -2.23
PRP43P53131 EMT2tM(CAU)O2 73 nt1.13□□□□□ -2.23
PRP43P53131 tT(AGU)BtT(AGU)B 73 nt1.04□□□□□ -2.24
PRP43P53131 tT(AGU)CtT(AGU)C 73 nt1.04□□□□□ -2.24
PRP43P53131 tT(AGU)DtT(AGU)D 73 nt1.04□□□□□ -2.24
PRP43P53131 tT(AGU)HtT(AGU)H 73 nt1.04□□□□□ -2.24
PRP43P53131 tT(AGU)I1tT(AGU)I1 73 nt1.04□□□□□ -2.24
PRP43P53131 tT(AGU)I2tT(AGU)I2 73 nt1.04□□□□□ -2.24
PRP43P53131 tT(AGU)JtT(AGU)J 73 nt1.04□□□□□ -2.24
PRP43P53131 tT(AGU)N1tT(AGU)N1 73 nt1.04□□□□□ -2.24
PRP43P53131 tT(AGU)N2tT(AGU)N2 73 nt1.04□□□□□ -2.24
PRP43P53131 tT(AGU)O1tT(AGU)O1 73 nt1.04□□□□□ -2.24
PRP43P53131 tT(AGU)O2tT(AGU)O2 73 nt1.04□□□□□ -2.24
PRP43P53131 tV(UAC)QtV(UAC)Q 76 nt1.04□□□□□ -2.24
PRP43P53131 snR67snR67 82 nt1.03□□□□□ -2.24
PRP43P53131 YDL114W-AYDL114W-A 114 nt1.02□□□□□ -2.25
PRP43P53131 YOR376W-AYOR376W-A 156 nt1.02□□□□□ -2.25
PRP43P53131 YOL014WYOL014W 375 nt1.01□□□□□ -2.25
PRP43P53131 FMP27YLR454W 7887 nt0.99□□□□□ -2.25
PRP43P53131 MLP2YIL149C 5040 nt0.98□□□□□ -2.25
PRP43P53131 YKL106C-AYKL106C-A 120 nt0.95□□□□□ -2.26
PRP43P53131 YBL100W-BYBL100W-B 5313 nt0.89□□□□□ -2.27
PRP43P53131 IQG1YPL242C 4488 nt0.89□□□□□ -2.27
PRP43P53131 YKL145W-AYKL145W-A 93 nt0.86□□□□□ -2.27
PRP43P53131 THO2YNL139C 4794 nt0.86□□□□□ -2.27
PRP43P53131 snR40snR40 97 nt0.84□□□□□ -2.27
PRP43P53131 YPR159C-AYPR159C-A 102 nt0.81□□□□□ -2.28
PRP43P53131 YML100W-AYML100W-A 174 nt0.73□□□□□ -2.29
PRP43P53131 snR77snR77 88 nt0.71□□□□□ -2.3
PRP43P53131 YOR316C-AYOR316C-A 210 nt0.7□□□□□ -2.3
PRP43P53131 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
PRP43P53131 SOV1YMR066W 2697 nt0.67□□□□□ -2.3
PRP43P53131 UTP10YJL109C 5310 nt0.6□□□□□ -2.31
PRP43P53131 SBH2YER019C-A 267 nt0.59□□□□□ -2.31
PRP43P53131 YOR186C-AYOR186C-A 210 nt0.55□□□□□ -2.32
PRP43P53131 YJL113WYJL113W 4647 nt0.54□□□□□ -2.32
PRP43P53131 MLP1YKR095W 5628 nt0.52□□□□□ -2.33
PRP43P53131 ESP1YGR098C 4893 nt0.52□□□□□ -2.33
PRP43P53131 PAU9YBL108C-A 129 nt0.42□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 66.3 ms