Protein–RNA interactions for Protein: P50112

KNH1, Cell wall synthesis protein KNH1, yeastyeast

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
KNH1P50112 tM(CAU)Q2tM(CAU)Q2 78 nt-0.64□□□□□ -2.51
KNH1P50112 tT(UGU)G1tT(UGU)G1 72 nt-0.67□□□□□ -2.52
KNH1P50112 tT(UGU)G2tT(UGU)G2 72 nt-0.67□□□□□ -2.52
KNH1P50112 tT(UGU)PtT(UGU)P 72 nt-0.67□□□□□ -2.52
KNH1P50112 YOR170WYOR170W 306 nt-0.67□□□□□ -2.52
KNH1P50112 snR49snR49 165 nt-0.67□□□□□ -2.52
KNH1P50112 snR39BsnR39B 96 nt-0.71□□□□□ -2.52
KNH1P50112 YJL113WYJL113W 4647 nt-0.72□□□□□ -2.52
KNH1P50112 YHR175W-AYHR175W-A 150 nt-0.72□□□□□ -2.52
KNH1P50112 YNL097C-BYNL097C-B 123 nt-0.72□□□□□ -2.52
KNH1P50112 YGR146C-AYGR146C-A 162 nt-0.73□□□□□ -2.53
KNH1P50112 PMP2YEL017C-A 132 nt-0.74□□□□□ -2.53
KNH1P50112 YER090C-AYER090C-A 90 nt-0.74□□□□□ -2.53
KNH1P50112 YOL155W-AYOL155W-A 135 nt-0.74□□□□□ -2.53
KNH1P50112 RDS3YPR094W 324 nt-0.74□□□□□ -2.53
KNH1P50112 snR50snR50 90 nt-0.74□□□□□ -2.53
KNH1P50112 YNL266WYNL266W 420 nt-0.75□□□□□ -2.53
KNH1P50112 YOR329W-AYOR329W-A 210 nt-0.75□□□□□ -2.53
KNH1P50112 snR65snR65 100 nt-0.76□□□□□ -2.53
KNH1P50112 YOR302WYOR302W 78 nt-0.78□□□□□ -2.53
KNH1P50112 YPL152W-AYPL152W-A 99 nt-0.78□□□□□ -2.53
KNH1P50112 snR56snR56 88 nt-0.81□□□□□ -2.54
KNH1P50112 tR(ACG)Q2tR(ACG)Q2 74 nt-0.81□□□□□ -2.54
KNH1P50112 JLP2YMR132C 627 nt-0.83□□□□□ -2.54
KNH1P50112 YHL009W-BYHL009W-B 5409 nt-0.84□□□□□ -2.54
KNH1P50112 tP(UGG)QtP(UGG)Q 72 nt-0.85□□□□□ -2.55
KNH1P50112 tD(GUC)QtD(GUC)Q 75 nt-0.86□□□□□ -2.55
KNH1P50112 snR161snR161 161 nt-0.87□□□□□ -2.55
KNH1P50112 YGL188C-AYGL188C-A 141 nt-0.88□□□□□ -2.55
KNH1P50112 YBR178WYBR178W 375 nt-0.89□□□□□ -2.55
KNH1P50112 snR67snR67 82 nt-0.9□□□□□ -2.55
KNH1P50112 snR52snR52 92 nt-0.9□□□□□ -2.55
KNH1P50112 YLR286W-AYLR286W-A 135 nt-0.91□□□□□ -2.56
KNH1P50112 YNL205CYNL205C 423 nt-0.92□□□□□ -2.56
KNH1P50112 snR48snR48 113 nt-0.92□□□□□ -2.56
KNH1P50112 YDL159C-BYDL159C-B 177 nt-0.95□□□□□ -2.56
KNH1P50112 tL(UAA)QtL(UAA)Q 85 nt-0.95□□□□□ -2.56
KNH1P50112 YLR342W-AYLR342W-A 174 nt-0.95□□□□□ -2.56
KNH1P50112 YOR231C-AYOR231C-A 201 nt-0.95□□□□□ -2.56
KNH1P50112 SKI7YOR076C 2244 nt-0.98□□□□□ -2.57
KNH1P50112 snR80snR80 171 nt-0.98□□□□□ -2.57
KNH1P50112 YDR524W-CYDR524W-C 90 nt-0.98□□□□□ -2.57
KNH1P50112 YOR102WYOR102W 351 nt-0.99□□□□□ -2.57
KNH1P50112 YBR223W-AYBR223W-A 120 nt-0.99□□□□□ -2.57
KNH1P50112 YHL015W-AYHL015W-A 84 nt-1.01□□□□□ -2.57
KNH1P50112 YLR299C-AYLR299C-A 93 nt-1.09□□□□□ -2.58
KNH1P50112 YBR196C-AYBR196C-A 150 nt-1.1□□□□□ -2.59
KNH1P50112 YML054C-AYML054C-A 159 nt-1.12□□□□□ -2.59
KNH1P50112 CDC65tQ(CUG)M 72 nt-1.14□□□□□ -2.59
KNH1P50112 tY(GUA)QtY(GUA)Q 84 nt-1.14□□□□□ -2.59
KNH1P50112 YDR406W-AYDR406W-A 246 nt-1.15□□□□□ -2.59
KNH1P50112 YGR240C-AYGR240C-A 201 nt-1.17□□□□□ -2.6
KNH1P50112 snR77snR77 88 nt-1.18□□□□□ -2.6
KNH1P50112 YNL198CYNL198C 303 nt-1.19□□□□□ -2.6
KNH1P50112 snR81snR81 201 nt-1.23□□□□□ -2.61
KNH1P50112 YMR315W-AYMR315W-A 108 nt-1.23□□□□□ -2.61
KNH1P50112 YBL053WYBL053W 375 nt-1.26□□□□□ -2.61
KNH1P50112 SOM1YEL059C-A 225 nt-1.29□□□□□ -2.62
KNH1P50112 YJL150WYJL150W 303 nt-1.29□□□□□ -2.62
KNH1P50112 YHR180C-BYHR180C-B 105 nt-1.3□□□□□ -2.62
KNH1P50112 YNR077CYNR077C 255 nt-1.3□□□□□ -2.62
KNH1P50112 YOR376W-AYOR376W-A 156 nt-1.33□□□□□ -2.62
KNH1P50112 YCR095W-AYCR095W-A 159 nt-1.4□□□□□ -2.63
KNH1P50112 YMR046W-AYMR046W-A 129 nt-1.44□□□□□ -2.64
KNH1P50112 YOR309CYOR309C 381 nt-1.46□□□□□ -2.64
KNH1P50112 YKL106C-AYKL106C-A 120 nt-1.49□□□□□ -2.65
KNH1P50112 YOR316C-AYOR316C-A 210 nt-1.49□□□□□ -2.65
KNH1P50112 SPG3YDR504C 384 nt-1.5□□□□□ -2.65
KNH1P50112 Q0142Q0142 177 nt-1.51□□□□□ -2.65
KNH1P50112 YGR151CYGR151C 336 nt-1.56□□□□□ -2.66
KNH1P50112 YBR296C-AYBR296C-A 120 nt-1.56□□□□□ -2.66
KNH1P50112 RPL41AYDL184C 78 nt-1.57□□□□□ -2.66
KNH1P50112 YBR109W-AYBR109W-A 225 nt-1.57□□□□□ -2.66
KNH1P50112 YOL083C-AYOL083C-A 141 nt-1.58□□□□□ -2.66
KNH1P50112 YBR126W-BYBR126W-B 144 nt-1.62□□□□□ -2.67
KNH1P50112 YBL071C-BYBL071C-B 99 nt-1.63□□□□□ -2.67
KNH1P50112 tM(CAU)Q1tM(CAU)Q1 76 nt-1.65□□□□□ -2.67
KNH1P50112 YCL001W-BYCL001W-B 255 nt-1.66□□□□□ -2.68
KNH1P50112 snR38snR38 95 nt-1.67□□□□□ -2.68
KNH1P50112 YLR466C-BYLR466C-B 117 nt-1.69□□□□□ -2.68
KNH1P50112 YOL164W-AYOL164W-A 183 nt-1.69□□□□□ -2.68
KNH1P50112 YAL037C-AYAL037C-A 93 nt-1.74□□□□□ -2.69
KNH1P50112 snR47snR47 99 nt-1.75□□□□□ -2.69
KNH1P50112 snR6snR6 112 nt-1.77□□□□□ -2.69
KNH1P50112 YNL338WYNL338W 159 nt-1.77□□□□□ -2.69
KNH1P50112 YBL100W-CYBL100W-C 120 nt-1.81□□□□□ -2.7
KNH1P50112 YOR335W-AYOR335W-A 81 nt-1.81□□□□□ -2.7
KNH1P50112 snR73snR73 106 nt-1.85□□□□□ -2.71
KNH1P50112 RPL41BYDL133C-A 78 nt-1.86□□□□□ -2.71
KNH1P50112 YNL337WYNL337W 255 nt-1.89□□□□□ -2.71
KNH1P50112 tS(GCU)Q1tS(GCU)Q1 86 nt-1.97□□□□□ -2.72
KNH1P50112 YKL225WYKL225W 348 nt-1.99□□□□□ -2.73
KNH1P50112 YDL114W-AYDL114W-A 114 nt-2.03□□□□□ -2.73
KNH1P50112 tV(UAC)QtV(UAC)Q 76 nt-2.07□□□□□ -2.74
KNH1P50112 snR85snR85 171 nt-2.08□□□□□ -2.74
KNH1P50112 YGL041C-BYGL041C-B 183 nt-2.11□□□□□ -2.75
KNH1P50112 YDR524C-AYDR524C-A 120 nt-2.12□□□□□ -2.75
KNH1P50112 Q0032Q0032 291 nt-2.14□□□□□ -2.75
KNH1P50112 YNL103W-AYNL103W-A 90 nt-2.18□□□□□ -2.76
KNH1P50112 YDR034C-AYDR034C-A 177 nt-2.19□□□□□ -2.76
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms