Protein–RNA interactions for Protein: P47024

TY4B-J, Transposon Ty4-J Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,803 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-JP47024 YGL041CYGL041C 204 nt-1.52□□□□□ -2.65
TY4B-JP47024 YOR381W-AYOR381W-A 168 nt-1.53□□□□□ -2.65
TY4B-JP47024 tY(GUA)QtY(GUA)Q 84 nt-1.54□□□□□ -2.66
TY4B-JP47024 YJR157WYJR157W 363 nt-1.54□□□□□ -2.66
TY4B-JP47024 YOR329W-AYOR329W-A 210 nt-1.55□□□□□ -2.66
TY4B-JP47024 YAL016C-BYAL016C-B 186 nt-1.56□□□□□ -2.66
TY4B-JP47024 snR77snR77 88 nt-1.56□□□□□ -2.66
TY4B-JP47024 snR81snR81 201 nt-1.58□□□□□ -2.66
TY4B-JP47024 CDC65tQ(CUG)M 72 nt-1.58□□□□□ -2.66
TY4B-JP47024 YPR197CYPR197C 564 nt-1.58□□□□□ -2.66
TY4B-JP47024 YDR413CYDR413C 576 nt-1.59□□□□□ -2.66
TY4B-JP47024 YER181CYER181C 324 nt-1.59□□□□□ -2.66
TY4B-JP47024 YML054C-AYML054C-A 159 nt-1.6□□□□□ -2.67
TY4B-JP47024 YNL205CYNL205C 423 nt-1.6□□□□□ -2.67
TY4B-JP47024 YGR240C-AYGR240C-A 201 nt-1.65□□□□□ -2.67
TY4B-JP47024 YBR196C-AYBR196C-A 150 nt-1.65□□□□□ -2.67
TY4B-JP47024 YDL159C-BYDL159C-B 177 nt-1.66□□□□□ -2.68
TY4B-JP47024 YLR286W-AYLR286W-A 135 nt-1.67□□□□□ -2.68
TY4B-JP47024 YOL166W-AYOL166W-A 156 nt-1.67□□□□□ -2.68
TY4B-JP47024 tF(GAA)QtF(GAA)Q 75 nt-1.68□□□□□ -2.68
TY4B-JP47024 YBR131C-AYBR131C-A 90 nt-1.68□□□□□ -2.68
TY4B-JP47024 YBR178WYBR178W 375 nt-1.68□□□□□ -2.68
TY4B-JP47024 YKL118WYKL118W 312 nt-1.7□□□□□ -2.68
TY4B-JP47024 YDR157WYDR157W 402 nt-1.73□□□□□ -2.69
TY4B-JP47024 YPL038W-AYPL038W-A 192 nt-1.73□□□□□ -2.69
TY4B-JP47024 snR55snR55 98 nt-1.79□□□□□ -2.7
TY4B-JP47024 YLR299C-AYLR299C-A 93 nt-1.8□□□□□ -2.7
TY4B-JP47024 RPL39YJL189W 156 nt-1.8□□□□□ -2.7
TY4B-JP47024 YDL240C-AYDL240C-A 138 nt-1.84□□□□□ -2.7
TY4B-JP47024 YOR376W-AYOR376W-A 156 nt-1.84□□□□□ -2.7
TY4B-JP47024 YNL097C-BYNL097C-B 123 nt-1.85□□□□□ -2.71
TY4B-JP47024 Q0017Q0017 162 nt-1.87□□□□□ -2.71
TY4B-JP47024 YHR180C-BYHR180C-B 105 nt-1.88□□□□□ -2.71
TY4B-JP47024 YOR102WYOR102W 351 nt-1.88□□□□□ -2.71
TY4B-JP47024 YLR222C-AYLR222C-A 231 nt-1.89□□□□□ -2.71
TY4B-JP47024 YBR126W-BYBR126W-B 144 nt-1.89□□□□□ -2.71
TY4B-JP47024 YLR342W-AYLR342W-A 174 nt-1.9□□□□□ -2.71
TY4B-JP47024 YNL277W-AYNL277W-A 189 nt-1.91□□□□□ -2.72
TY4B-JP47024 YMR315W-AYMR315W-A 108 nt-1.93□□□□□ -2.72
TY4B-JP47024 snR48snR48 113 nt-1.94□□□□□ -2.72
TY4B-JP47024 YOR302WYOR302W 78 nt-1.95□□□□□ -2.72
TY4B-JP47024 YDR543CYDR543C 300 nt-1.96□□□□□ -2.72
TY4B-JP47024 YOR316C-AYOR316C-A 210 nt-1.96□□□□□ -2.72
TY4B-JP47024 tL(UAA)QtL(UAA)Q 85 nt-1.98□□□□□ -2.73
TY4B-JP47024 GIM4YEL003W 336 nt-1.98□□□□□ -2.73
TY4B-JP47024 Q0142Q0142 177 nt-1.99□□□□□ -2.73
TY4B-JP47024 YGL188C-AYGL188C-A 141 nt-2.01□□□□□ -2.73
TY4B-JP47024 YDR118W-AYDR118W-A 117 nt-2.02□□□□□ -2.73
TY4B-JP47024 YPR012WYPR012W 255 nt-2.04□□□□□ -2.74
TY4B-JP47024 YNL198CYNL198C 303 nt-2.06□□□□□ -2.74
TY4B-JP47024 YOR309CYOR309C 381 nt-2.07□□□□□ -2.74
TY4B-JP47024 YJL150WYJL150W 303 nt-2.1□□□□□ -2.75
TY4B-JP47024 YOL155W-AYOL155W-A 135 nt-2.1□□□□□ -2.75
TY4B-JP47024 snR52snR52 92 nt-2.13□□□□□ -2.75
TY4B-JP47024 YHL015W-AYHL015W-A 84 nt-2.14□□□□□ -2.75
TY4B-JP47024 VAR1Q0140 1197 nt-2.16□□□□□ -2.76
TY4B-JP47024 RPL41AYDL184C 78 nt-2.19□□□□□ -2.76
TY4B-JP47024 YKL106C-AYKL106C-A 120 nt-2.21□□□□□ -2.76
TY4B-JP47024 YPL152W-AYPL152W-A 99 nt-2.23□□□□□ -2.77
TY4B-JP47024 snR65snR65 100 nt-2.24□□□□□ -2.77
TY4B-JP47024 snR56snR56 88 nt-2.3□□□□□ -2.78
TY4B-JP47024 YBR296C-AYBR296C-A 120 nt-2.3□□□□□ -2.78
TY4B-JP47024 SOM1YEL059C-A 225 nt-2.32□□□□□ -2.78
TY4B-JP47024 snR38snR38 95 nt-2.33□□□□□ -2.78
TY4B-JP47024 YBR109W-AYBR109W-A 225 nt-2.35□□□□□ -2.79
TY4B-JP47024 YCR095W-AYCR095W-A 159 nt-2.37□□□□□ -2.79
TY4B-JP47024 snR80snR80 171 nt-2.4□□□□□ -2.79
TY4B-JP47024 YDR524W-CYDR524W-C 90 nt-2.4□□□□□ -2.79
TY4B-JP47024 YOL083C-AYOL083C-A 141 nt-2.45□□□□□ -2.8
TY4B-JP47024 YDR406W-AYDR406W-A 246 nt-2.46□□□□□ -2.8
TY4B-JP47024 YBL053WYBL053W 375 nt-2.49□□□□□ -2.81
TY4B-JP47024 YGR151CYGR151C 336 nt-2.49□□□□□ -2.81
TY4B-JP47024 YBL071C-BYBL071C-B 99 nt-2.51□□□□□ -2.81
TY4B-JP47024 snR6snR6 112 nt-2.52□□□□□ -2.81
TY4B-JP47024 YOR335W-AYOR335W-A 81 nt-2.59□□□□□ -2.82
TY4B-JP47024 snR47snR47 99 nt-2.6□□□□□ -2.83
TY4B-JP47024 YOL164W-AYOL164W-A 183 nt-2.61□□□□□ -2.83
TY4B-JP47024 YOR231C-AYOR231C-A 201 nt-2.64□□□□□ -2.83
TY4B-JP47024 snR73snR73 106 nt-2.67□□□□□ -2.84
TY4B-JP47024 RPL41BYDL133C-A 78 nt-2.68□□□□□ -2.84
TY4B-JP47024 YHR175W-AYHR175W-A 150 nt-2.71□□□□□ -2.84
TY4B-JP47024 YAL037C-AYAL037C-A 93 nt-2.75□□□□□ -2.85
TY4B-JP47024 tV(UAC)QtV(UAC)Q 76 nt-2.75□□□□□ -2.85
TY4B-JP47024 YDL114W-AYDL114W-A 114 nt-2.78□□□□□ -2.85
TY4B-JP47024 YJR162CYJR162C 351 nt-2.84□□□□□ -2.86
TY4B-JP47024 YNL337WYNL337W 255 nt-2.84□□□□□ -2.86
TY4B-JP47024 YBL100W-CYBL100W-C 120 nt-2.85□□□□□ -2.87
TY4B-JP47024 Q0144Q0144 330 nt-2.86□□□□□ -2.87
TY4B-JP47024 tS(GCU)Q1tS(GCU)Q1 86 nt-2.89□□□□□ -2.87
TY4B-JP47024 YDR524C-AYDR524C-A 120 nt-2.89□□□□□ -2.87
TY4B-JP47024 YKL225WYKL225W 348 nt-2.89□□□□□ -2.87
TY4B-JP47024 snR85snR85 171 nt-2.9□□□□□ -2.87
TY4B-JP47024 YMR046W-AYMR046W-A 129 nt-2.9□□□□□ -2.87
TY4B-JP47024 tR(ACG)Q2tR(ACG)Q2 74 nt-2.93□□□□□ -2.88
TY4B-JP47024 SPG3YDR504C 384 nt-3.05□□□□□ -2.9
TY4B-JP47024 YCL001W-BYCL001W-B 255 nt-3.06□□□□□ -2.9
TY4B-JP47024 YGR122C-AYGR122C-A 129 nt-3.13□□□□□ -2.91
TY4B-JP47024 YDL159W-AYDL159W-A 132 nt-3.2□□□□□ -2.92
TY4B-JP47024 YLR466C-BYLR466C-B 117 nt-3.22□□□□□ -2.93
TY4B-JP47024 YDR034C-AYDR034C-A 177 nt-3.27□□□□□ -2.93
Retrieved 100 of 7,029 protein–RNA pairs in 9.4 ms