Protein–RNA interactions for Protein: P42951

LSB6, Phosphatidylinositol 4-kinase LSB6, yeastyeast

Predictions only

Length 607 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSB6P42951 YPL060C-AYPL060C-A 3315 nt1.65□□□□□ -2.15
LSB6P42951 TRM732YMR259C 4263 nt1.65□□□□□ -2.15
LSB6P42951 YGR130CYGR130C 2451 nt1.64□□□□□ -2.15
LSB6P42951 EST2YLR318W 2655 nt1.63□□□□□ -2.15
LSB6P42951 IRA1YBR140C 9279 nt1.63□□□□□ -2.15
LSB6P42951 NST1YNL091W 3723 nt1.63□□□□□ -2.15
LSB6P42951 SSK2YNR031C 4740 nt1.63□□□□□ -2.15
LSB6P42951 VPS15YBR097W 4365 nt1.62□□□□□ -2.15
LSB6P42951 PAU12YGR294W 363 nt1.61□□□□□ -2.15
LSB6P42951 MSN5YDR335W 3675 nt1.61□□□□□ -2.15
LSB6P42951 NUP188YML103C 4968 nt1.61□□□□□ -2.15
LSB6P42951 IML1YJR138W 4755 nt1.6□□□□□ -2.15
LSB6P42951 YJL077W-AYJL077W-A 87 nt1.56□□□□□ -2.16
LSB6P42951 SIP4YJL089W 2490 nt1.55□□□□□ -2.16
LSB6P42951 BUL2YML111W 2763 nt1.54□□□□□ -2.16
LSB6P42951 CDC39YCR093W 6327 nt1.51□□□□□ -2.17
LSB6P42951 tQ(UUG)QtQ(UUG)Q 76 nt1.5□□□□□ -2.17
LSB6P42951 FYV8YGR196C 2454 nt1.47□□□□□ -2.17
LSB6P42951 YLL006W-AYLL006W-A 177 nt1.46□□□□□ -2.18
LSB6P42951 YOR376W-AYOR376W-A 156 nt1.45□□□□□ -2.18
LSB6P42951 YNL054W-BYNL054W-B 5250 nt1.45□□□□□ -2.18
LSB6P42951 MYO1YHR023W 5787 nt1.44□□□□□ -2.18
LSB6P42951 YER090C-AYER090C-A 90 nt1.42□□□□□ -2.18
LSB6P42951 SPC110YDR356W 2835 nt1.42□□□□□ -2.18
LSB6P42951 tH(GUG)E1tH(GUG)E1 72 nt1.41□□□□□ -2.18
LSB6P42951 tH(GUG)E2tH(GUG)E2 72 nt1.41□□□□□ -2.18
LSB6P42951 tH(GUG)G1tH(GUG)G1 72 nt1.41□□□□□ -2.18
LSB6P42951 tH(GUG)G2tH(GUG)G2 72 nt1.41□□□□□ -2.18
LSB6P42951 tH(GUG)HtH(GUG)H 72 nt1.41□□□□□ -2.18
LSB6P42951 tH(GUG)KtH(GUG)K 72 nt1.41□□□□□ -2.18
LSB6P42951 tH(GUG)MtH(GUG)M 72 nt1.41□□□□□ -2.18
LSB6P42951 tQ(UUG)E2tQ(UUG)E2 72 nt1.4□□□□□ -2.19
LSB6P42951 YDL114W-AYDL114W-A 114 nt1.39□□□□□ -2.19
LSB6P42951 tV(UAC)BtV(UAC)B 74 nt1.38□□□□□ -2.19
LSB6P42951 tV(UAC)DtV(UAC)D 74 nt1.38□□□□□ -2.19
LSB6P42951 HKR1YDR420W 5409 nt1.34□□□□□ -2.19
LSB6P42951 snR67snR67 82 nt1.32□□□□□ -2.2
LSB6P42951 tV(UAC)QtV(UAC)Q 76 nt1.32□□□□□ -2.2
LSB6P42951 YNL284C-BYNL284C-B 5268 nt1.32□□□□□ -2.2
LSB6P42951 UTP20YBL004W 7482 nt1.31□□□□□ -2.2
LSB6P42951 PAU24YBR301W 363 nt1.31□□□□□ -2.2
LSB6P42951 SPT7YBR081C 3999 nt1.3□□□□□ -2.2
LSB6P42951 YKL106C-AYKL106C-A 120 nt1.27□□□□□ -2.21
LSB6P42951 snR40snR40 97 nt1.27□□□□□ -2.21
LSB6P42951 YPR117WYPR117W 7470 nt1.27□□□□□ -2.21
LSB6P42951 YMR160WYMR160W 2451 nt1.21□□□□□ -2.22
LSB6P42951 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
LSB6P42951 BUD3YCL014W 4911 nt1.19□□□□□ -2.22
LSB6P42951 YOR192C-BYOR192C-B 5313 nt1.19□□□□□ -2.22
LSB6P42951 DOP1YDR141C 5097 nt1.16□□□□□ -2.22
LSB6P42951 RKR1YMR247C 4689 nt1.16□□□□□ -2.22
LSB6P42951 SCC2YDR180W 4482 nt1.13□□□□□ -2.23
LSB6P42951 tF(GAA)BtF(GAA)B 73 nt1.12□□□□□ -2.23
LSB6P42951 tF(GAA)FtF(GAA)F 73 nt1.12□□□□□ -2.23
LSB6P42951 tF(GAA)GtF(GAA)G 73 nt1.12□□□□□ -2.23
LSB6P42951 tF(GAA)H1tF(GAA)H1 73 nt1.12□□□□□ -2.23
LSB6P42951 tF(GAA)H2tF(GAA)H2 73 nt1.12□□□□□ -2.23
LSB6P42951 tF(GAA)MtF(GAA)M 73 nt1.12□□□□□ -2.23
LSB6P42951 tF(GAA)P1tF(GAA)P1 73 nt1.12□□□□□ -2.23
LSB6P42951 tF(GAA)P2tF(GAA)P2 73 nt1.12□□□□□ -2.23
LSB6P42951 LTE1YAL024C 4308 nt1.11□□□□□ -2.23
LSB6P42951 MLP2YIL149C 5040 nt1.03□□□□□ -2.25
LSB6P42951 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
LSB6P42951 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
LSB6P42951 snR77snR77 88 nt1□□□□□ -2.25
LSB6P42951 BEM2YER155C 6504 nt0.96□□□□□ -2.26
LSB6P42951 YBL100W-BYBL100W-B 5313 nt0.95□□□□□ -2.26
LSB6P42951 YOR316C-AYOR316C-A 210 nt0.95□□□□□ -2.26
LSB6P42951 EMT1tM(CAU)D 73 nt0.93□□□□□ -2.26
LSB6P42951 EMT5tM(CAU)J1 73 nt0.93□□□□□ -2.26
LSB6P42951 EMT3tM(CAU)J2 73 nt0.93□□□□□ -2.26
LSB6P42951 EMT4tM(CAU)M 73 nt0.93□□□□□ -2.26
LSB6P42951 EMT2tM(CAU)O2 73 nt0.93□□□□□ -2.26
LSB6P42951 MLP1YKR095W 5628 nt0.92□□□□□ -2.26
LSB6P42951 YOL014WYOL014W 375 nt0.91□□□□□ -2.26
LSB6P42951 SBH2YER019C-A 267 nt0.88□□□□□ -2.27
LSB6P42951 YML100W-AYML100W-A 174 nt0.87□□□□□ -2.27
LSB6P42951 SOV1YMR066W 2697 nt0.86□□□□□ -2.27
LSB6P42951 THO2YNL139C 4794 nt0.85□□□□□ -2.27
LSB6P42951 IQG1YPL242C 4488 nt0.82□□□□□ -2.28
LSB6P42951 tT(AGU)BtT(AGU)B 73 nt0.78□□□□□ -2.28
LSB6P42951 tT(AGU)CtT(AGU)C 73 nt0.78□□□□□ -2.28
LSB6P42951 tT(AGU)DtT(AGU)D 73 nt0.78□□□□□ -2.28
LSB6P42951 tT(AGU)HtT(AGU)H 73 nt0.78□□□□□ -2.28
LSB6P42951 tT(AGU)I1tT(AGU)I1 73 nt0.78□□□□□ -2.28
LSB6P42951 tT(AGU)I2tT(AGU)I2 73 nt0.78□□□□□ -2.28
LSB6P42951 tT(AGU)JtT(AGU)J 73 nt0.78□□□□□ -2.28
LSB6P42951 tT(AGU)N1tT(AGU)N1 73 nt0.78□□□□□ -2.28
LSB6P42951 tT(AGU)N2tT(AGU)N2 73 nt0.78□□□□□ -2.28
LSB6P42951 tT(AGU)O1tT(AGU)O1 73 nt0.78□□□□□ -2.28
LSB6P42951 tT(AGU)O2tT(AGU)O2 73 nt0.78□□□□□ -2.28
LSB6P42951 YKL145W-AYKL145W-A 93 nt0.77□□□□□ -2.29
LSB6P42951 YOR186C-AYOR186C-A 210 nt0.74□□□□□ -2.29
LSB6P42951 FMP27YLR454W 7887 nt0.7□□□□□ -2.3
LSB6P42951 YPR159C-AYPR159C-A 102 nt0.69□□□□□ -2.3
LSB6P42951 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
LSB6P42951 ESP1YGR098C 4893 nt0.64□□□□□ -2.31
LSB6P42951 PAU9YBL108C-A 129 nt0.59□□□□□ -2.31
LSB6P42951 UTP10YJL109C 5310 nt0.58□□□□□ -2.32
LSB6P42951 snR128snR128 126 nt0.47□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 86.1 ms