Protein–RNA interactions for Protein: P40040

THO1, Protein THO1, yeastyeast

Known RBP Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
THO1P40040 YOR381W-AYOR381W-A 168 nt-0.68□□□□□ -2.52
THO1P40040 snR49snR49 165 nt-0.68□□□□□ -2.52
THO1P40040 URB1YKL014C 5295 nt-0.71□□□□□ -2.52
THO1P40040 snR69snR69 101 nt-0.72□□□□□ -2.52
THO1P40040 tA(UGC)QtA(UGC)Q 76 nt-0.72□□□□□ -2.52
THO1P40040 YOR170WYOR170W 306 nt-0.74□□□□□ -2.53
THO1P40040 snR33snR33 183 nt-0.75□□□□□ -2.53
THO1P40040 snR56snR56 88 nt-0.76□□□□□ -2.53
THO1P40040 snR39BsnR39B 96 nt-0.76□□□□□ -2.53
THO1P40040 tR(ACG)Q2tR(ACG)Q2 74 nt-0.77□□□□□ -2.53
THO1P40040 YOL155W-AYOL155W-A 135 nt-0.77□□□□□ -2.53
THO1P40040 snR65snR65 100 nt-0.78□□□□□ -2.53
THO1P40040 snR161snR161 161 nt-0.79□□□□□ -2.54
THO1P40040 YPL152W-AYPL152W-A 99 nt-0.81□□□□□ -2.54
THO1P40040 YNL097C-BYNL097C-B 123 nt-0.82□□□□□ -2.54
THO1P40040 YOR329W-AYOR329W-A 210 nt-0.82□□□□□ -2.54
THO1P40040 YGR146C-AYGR146C-A 162 nt-0.83□□□□□ -2.54
THO1P40040 RDS3YPR094W 324 nt-0.83□□□□□ -2.54
THO1P40040 snR50snR50 90 nt-0.84□□□□□ -2.54
THO1P40040 PMP2YEL017C-A 132 nt-0.85□□□□□ -2.55
THO1P40040 YER090C-AYER090C-A 90 nt-0.86□□□□□ -2.55
THO1P40040 YOR302WYOR302W 78 nt-0.86□□□□□ -2.55
THO1P40040 YNL266WYNL266W 420 nt-0.87□□□□□ -2.55
THO1P40040 YJL113WYJL113W 4647 nt-0.87□□□□□ -2.55
THO1P40040 YBR223W-AYBR223W-A 120 nt-0.88□□□□□ -2.55
THO1P40040 YHL009W-BYHL009W-B 5409 nt-0.9□□□□□ -2.55
THO1P40040 YGL188C-AYGL188C-A 141 nt-0.94□□□□□ -2.56
THO1P40040 snR52snR52 92 nt-0.96□□□□□ -2.56
THO1P40040 JLP2YMR132C 627 nt-0.97□□□□□ -2.56
THO1P40040 tD(GUC)QtD(GUC)Q 75 nt-0.99□□□□□ -2.57
THO1P40040 YDR524W-CYDR524W-C 90 nt-0.99□□□□□ -2.57
THO1P40040 YBR178WYBR178W 375 nt-1□□□□□ -2.57
THO1P40040 YOR231C-AYOR231C-A 201 nt-1.01□□□□□ -2.57
THO1P40040 YLR286W-AYLR286W-A 135 nt-1.02□□□□□ -2.57
THO1P40040 snR67snR67 82 nt-1.03□□□□□ -2.57
THO1P40040 YLR342W-AYLR342W-A 174 nt-1.03□□□□□ -2.57
THO1P40040 snR48snR48 113 nt-1.03□□□□□ -2.57
THO1P40040 YNL205CYNL205C 423 nt-1.04□□□□□ -2.58
THO1P40040 snR80snR80 171 nt-1.05□□□□□ -2.58
THO1P40040 tL(UAA)QtL(UAA)Q 85 nt-1.07□□□□□ -2.58
THO1P40040 YDL159C-BYDL159C-B 177 nt-1.08□□□□□ -2.58
THO1P40040 YHL015W-AYHL015W-A 84 nt-1.09□□□□□ -2.58
THO1P40040 YOR102WYOR102W 351 nt-1.09□□□□□ -2.58
THO1P40040 YNR077CYNR077C 255 nt-1.16□□□□□ -2.6
THO1P40040 SKI7YOR076C 2244 nt-1.16□□□□□ -2.6
THO1P40040 YDR406W-AYDR406W-A 246 nt-1.24□□□□□ -2.61
THO1P40040 YLR299C-AYLR299C-A 93 nt-1.24□□□□□ -2.61
THO1P40040 YBR196C-AYBR196C-A 150 nt-1.24□□□□□ -2.61
THO1P40040 tP(UGG)QtP(UGG)Q 72 nt-1.26□□□□□ -2.61
THO1P40040 YNL198CYNL198C 303 nt-1.34□□□□□ -2.62
THO1P40040 YML054C-AYML054C-A 159 nt-1.37□□□□□ -2.63
THO1P40040 YBL053WYBL053W 375 nt-1.42□□□□□ -2.64
THO1P40040 YJL150WYJL150W 303 nt-1.44□□□□□ -2.64
THO1P40040 tY(GUA)QtY(GUA)Q 84 nt-1.45□□□□□ -2.64
THO1P40040 SOM1YEL059C-A 225 nt-1.46□□□□□ -2.64
THO1P40040 YHR180C-BYHR180C-B 105 nt-1.5□□□□□ -2.65
THO1P40040 YGR240C-AYGR240C-A 201 nt-1.57□□□□□ -2.66
THO1P40040 CDC65tQ(CUG)M 72 nt-1.59□□□□□ -2.66
THO1P40040 YMR046W-AYMR046W-A 129 nt-1.6□□□□□ -2.67
THO1P40040 YCR095W-AYCR095W-A 159 nt-1.61□□□□□ -2.67
THO1P40040 Q0142Q0142 177 nt-1.61□□□□□ -2.67
THO1P40040 YOR376W-AYOR376W-A 156 nt-1.61□□□□□ -2.67
THO1P40040 snR77snR77 88 nt-1.63□□□□□ -2.67
THO1P40040 SPG3YDR504C 384 nt-1.65□□□□□ -2.67
THO1P40040 YMR315W-AYMR315W-A 108 nt-1.73□□□□□ -2.69
THO1P40040 YKL106C-AYKL106C-A 120 nt-1.74□□□□□ -2.69
THO1P40040 YBR126W-BYBR126W-B 144 nt-1.74□□□□□ -2.69
THO1P40040 YGR151CYGR151C 336 nt-1.79□□□□□ -2.7
THO1P40040 snR81snR81 201 nt-1.8□□□□□ -2.7
THO1P40040 YOL083C-AYOL083C-A 141 nt-1.81□□□□□ -2.7
THO1P40040 RPL41AYDL184C 78 nt-1.82□□□□□ -2.7
THO1P40040 YOR316C-AYOR316C-A 210 nt-1.82□□□□□ -2.7
THO1P40040 YBR296C-AYBR296C-A 120 nt-1.83□□□□□ -2.7
THO1P40040 tM(CAU)Q1tM(CAU)Q1 76 nt-1.84□□□□□ -2.7
THO1P40040 YBR109W-AYBR109W-A 225 nt-1.84□□□□□ -2.7
THO1P40040 YCL001W-BYCL001W-B 255 nt-1.88□□□□□ -2.71
THO1P40040 YLR466C-BYLR466C-B 117 nt-1.9□□□□□ -2.71
THO1P40040 YBL071C-BYBL071C-B 99 nt-1.9□□□□□ -2.71
THO1P40040 YNL338WYNL338W 159 nt-1.97□□□□□ -2.72
THO1P40040 YOL164W-AYOL164W-A 183 nt-1.97□□□□□ -2.72
THO1P40040 snR38snR38 95 nt-1.99□□□□□ -2.73
THO1P40040 snR47snR47 99 nt-2.02□□□□□ -2.73
THO1P40040 YAL037C-AYAL037C-A 93 nt-2.03□□□□□ -2.73
THO1P40040 YBL100W-CYBL100W-C 120 nt-2.06□□□□□ -2.74
THO1P40040 YDR543CYDR543C 300 nt-2.07□□□□□ -2.74
THO1P40040 YOR309CYOR309C 381 nt-2.14□□□□□ -2.75
THO1P40040 YOL166W-AYOL166W-A 156 nt-2.18□□□□□ -2.76
THO1P40040 YNL337WYNL337W 255 nt-2.19□□□□□ -2.76
THO1P40040 tS(GCU)Q1tS(GCU)Q1 86 nt-2.3□□□□□ -2.78
THO1P40040 YKL225WYKL225W 348 nt-2.34□□□□□ -2.78
THO1P40040 snR6snR6 112 nt-2.4□□□□□ -2.79
THO1P40040 YGL041C-BYGL041C-B 183 nt-2.43□□□□□ -2.8
THO1P40040 Q0032Q0032 291 nt-2.45□□□□□ -2.8
THO1P40040 YOR335W-AYOR335W-A 81 nt-2.45□□□□□ -2.8
THO1P40040 RPL41BYDL133C-A 78 nt-2.47□□□□□ -2.8
THO1P40040 YDL114W-AYDL114W-A 114 nt-2.48□□□□□ -2.81
THO1P40040 YNL103W-AYNL103W-A 90 nt-2.53□□□□□ -2.81
THO1P40040 snR73snR73 106 nt-2.55□□□□□ -2.82
THO1P40040 YDR034C-AYDR034C-A 177 nt-2.55□□□□□ -2.82
THO1P40040 YGL007C-AYGL007C-A 87 nt-2.56□□□□□ -2.82
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms