Protein–RNA interactions for Protein: P40018

SMB1, Small nuclear ribonucleoprotein-associated protein B, yeastyeast

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMB1P40018 YEL014CYEL014C 306 nt-0.78□□□□□ -2.53
SMB1P40018 YBR131C-AYBR131C-A 90 nt-0.78□□□□□ -2.53
SMB1P40018 YJL182CYJL182C 318 nt-0.79□□□□□ -2.54
SMB1P40018 YPL060C-AYPL060C-A 3315 nt-0.8□□□□□ -2.54
SMB1P40018 YOR170WYOR170W 306 nt-0.8□□□□□ -2.54
SMB1P40018 snR49snR49 165 nt-0.8□□□□□ -2.54
SMB1P40018 snR161snR161 161 nt-0.81□□□□□ -2.54
SMB1P40018 snR69snR69 101 nt-0.82□□□□□ -2.54
SMB1P40018 YHR175W-AYHR175W-A 150 nt-0.86□□□□□ -2.55
SMB1P40018 snR39BsnR39B 96 nt-0.86□□□□□ -2.55
SMB1P40018 YGR146C-AYGR146C-A 162 nt-0.87□□□□□ -2.55
SMB1P40018 YOL155W-AYOL155W-A 135 nt-0.88□□□□□ -2.55
SMB1P40018 YHL009W-BYHL009W-B 5409 nt-0.88□□□□□ -2.55
SMB1P40018 snR65snR65 100 nt-0.89□□□□□ -2.55
SMB1P40018 RDS3YPR094W 324 nt-0.9□□□□□ -2.55
SMB1P40018 YER090C-AYER090C-A 90 nt-0.91□□□□□ -2.56
SMB1P40018 PMP2YEL017C-A 132 nt-0.93□□□□□ -2.56
SMB1P40018 YBR223W-AYBR223W-A 120 nt-0.93□□□□□ -2.56
SMB1P40018 YNL097C-BYNL097C-B 123 nt-0.95□□□□□ -2.56
SMB1P40018 snR56snR56 88 nt-0.96□□□□□ -2.56
SMB1P40018 YOR329W-AYOR329W-A 210 nt-0.97□□□□□ -2.56
SMB1P40018 YPL152W-AYPL152W-A 99 nt-0.97□□□□□ -2.56
SMB1P40018 tR(ACG)Q2tR(ACG)Q2 74 nt-0.98□□□□□ -2.57
SMB1P40018 YNL266WYNL266W 420 nt-0.99□□□□□ -2.57
SMB1P40018 snR50snR50 90 nt-0.99□□□□□ -2.57
SMB1P40018 YNR077CYNR077C 255 nt-1□□□□□ -2.57
SMB1P40018 tP(UGG)QtP(UGG)Q 72 nt-1.02□□□□□ -2.57
SMB1P40018 YOR302WYOR302W 78 nt-1.04□□□□□ -2.58
SMB1P40018 YGL188C-AYGL188C-A 141 nt-1.06□□□□□ -2.58
SMB1P40018 tD(GUC)QtD(GUC)Q 75 nt-1.08□□□□□ -2.58
SMB1P40018 YNL205CYNL205C 423 nt-1.11□□□□□ -2.59
SMB1P40018 snR67snR67 82 nt-1.12□□□□□ -2.59
SMB1P40018 YLR286W-AYLR286W-A 135 nt-1.12□□□□□ -2.59
SMB1P40018 JLP2YMR132C 627 nt-1.12□□□□□ -2.59
SMB1P40018 snR48snR48 113 nt-1.12□□□□□ -2.59
SMB1P40018 YLR342W-AYLR342W-A 174 nt-1.13□□□□□ -2.59
SMB1P40018 snR52snR52 92 nt-1.14□□□□□ -2.59
SMB1P40018 YBR178WYBR178W 375 nt-1.17□□□□□ -2.6
SMB1P40018 YOR102WYOR102W 351 nt-1.18□□□□□ -2.6
SMB1P40018 YDL159C-BYDL159C-B 177 nt-1.19□□□□□ -2.6
SMB1P40018 YDR524W-CYDR524W-C 90 nt-1.19□□□□□ -2.6
SMB1P40018 YOR231C-AYOR231C-A 201 nt-1.19□□□□□ -2.6
SMB1P40018 YHL015W-AYHL015W-A 84 nt-1.24□□□□□ -2.61
SMB1P40018 tL(UAA)QtL(UAA)Q 85 nt-1.25□□□□□ -2.61
SMB1P40018 tY(GUA)QtY(GUA)Q 84 nt-1.25□□□□□ -2.61
SMB1P40018 SKI7YOR076C 2244 nt-1.28□□□□□ -2.61
SMB1P40018 snR80snR80 171 nt-1.29□□□□□ -2.62
SMB1P40018 YLR299C-AYLR299C-A 93 nt-1.37□□□□□ -2.63
SMB1P40018 YBR196C-AYBR196C-A 150 nt-1.37□□□□□ -2.63
SMB1P40018 YDR406W-AYDR406W-A 246 nt-1.4□□□□□ -2.63
SMB1P40018 YML054C-AYML054C-A 159 nt-1.45□□□□□ -2.64
SMB1P40018 CDC65tQ(CUG)M 72 nt-1.48□□□□□ -2.65
SMB1P40018 YNL198CYNL198C 303 nt-1.52□□□□□ -2.65
SMB1P40018 snR81snR81 201 nt-1.55□□□□□ -2.66
SMB1P40018 snR77snR77 88 nt-1.56□□□□□ -2.66
SMB1P40018 YGR240C-AYGR240C-A 201 nt-1.59□□□□□ -2.66
SMB1P40018 SOM1YEL059C-A 225 nt-1.61□□□□□ -2.67
SMB1P40018 YMR315W-AYMR315W-A 108 nt-1.62□□□□□ -2.67
SMB1P40018 YBR126W-BYBR126W-B 144 nt-1.62□□□□□ -2.67
SMB1P40018 YHR180C-BYHR180C-B 105 nt-1.63□□□□□ -2.67
SMB1P40018 YJL150WYJL150W 303 nt-1.66□□□□□ -2.68
SMB1P40018 YCR095W-AYCR095W-A 159 nt-1.7□□□□□ -2.68
SMB1P40018 YMR046W-AYMR046W-A 129 nt-1.71□□□□□ -2.68
SMB1P40018 YBL053WYBL053W 375 nt-1.73□□□□□ -2.69
SMB1P40018 YOR376W-AYOR376W-A 156 nt-1.77□□□□□ -2.69
SMB1P40018 YOR309CYOR309C 381 nt-1.83□□□□□ -2.7
SMB1P40018 Q0142Q0142 177 nt-1.85□□□□□ -2.71
SMB1P40018 YKL106C-AYKL106C-A 120 nt-1.88□□□□□ -2.71
SMB1P40018 SPG3YDR504C 384 nt-1.9□□□□□ -2.71
SMB1P40018 YOR316C-AYOR316C-A 210 nt-1.92□□□□□ -2.72
SMB1P40018 YBR296C-AYBR296C-A 120 nt-1.96□□□□□ -2.72
SMB1P40018 RPL41AYDL184C 78 nt-1.97□□□□□ -2.72
SMB1P40018 tM(CAU)Q1tM(CAU)Q1 76 nt-1.97□□□□□ -2.72
SMB1P40018 YGR151CYGR151C 336 nt-1.98□□□□□ -2.73
SMB1P40018 YBR109W-AYBR109W-A 225 nt-2.02□□□□□ -2.73
SMB1P40018 YOL083C-AYOL083C-A 141 nt-2.03□□□□□ -2.73
SMB1P40018 YBL071C-BYBL071C-B 99 nt-2.11□□□□□ -2.75
SMB1P40018 YCL001W-BYCL001W-B 255 nt-2.12□□□□□ -2.75
SMB1P40018 YDR543CYDR543C 300 nt-2.13□□□□□ -2.75
SMB1P40018 YLR466C-BYLR466C-B 117 nt-2.13□□□□□ -2.75
SMB1P40018 YOL164W-AYOL164W-A 183 nt-2.15□□□□□ -2.75
SMB1P40018 YAL037C-AYAL037C-A 93 nt-2.18□□□□□ -2.76
SMB1P40018 snR38snR38 95 nt-2.19□□□□□ -2.76
SMB1P40018 YBL100W-CYBL100W-C 120 nt-2.21□□□□□ -2.76
SMB1P40018 YOL166W-AYOL166W-A 156 nt-2.23□□□□□ -2.77
SMB1P40018 snR47snR47 99 nt-2.25□□□□□ -2.77
SMB1P40018 YNL338WYNL338W 159 nt-2.26□□□□□ -2.77
SMB1P40018 snR6snR6 112 nt-2.35□□□□□ -2.79
SMB1P40018 YNL337WYNL337W 255 nt-2.39□□□□□ -2.79
SMB1P40018 snR73snR73 106 nt-2.46□□□□□ -2.8
SMB1P40018 YOR335W-AYOR335W-A 81 nt-2.48□□□□□ -2.81
SMB1P40018 YKL225WYKL225W 348 nt-2.54□□□□□ -2.82
SMB1P40018 YDR524C-AYDR524C-A 120 nt-2.57□□□□□ -2.82
SMB1P40018 tS(GCU)Q1tS(GCU)Q1 86 nt-2.58□□□□□ -2.82
SMB1P40018 RPL41BYDL133C-A 78 nt-2.6□□□□□ -2.83
SMB1P40018 Q0032Q0032 291 nt-2.62□□□□□ -2.83
SMB1P40018 YDL114W-AYDL114W-A 114 nt-2.67□□□□□ -2.84
SMB1P40018 YGL041C-BYGL041C-B 183 nt-2.69□□□□□ -2.84
SMB1P40018 tV(UAC)QtV(UAC)Q 76 nt-2.75□□□□□ -2.85
SMB1P40018 snR61snR61 90 nt-2.78□□□□□ -2.85
Retrieved 100 of 7,029 protein–RNA pairs in 56.4 ms