Protein–RNA interactions for Protein: P38932

VPS45, Vacuolar protein sorting-associated protein 45, yeastyeast

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS45P38932 YER181CYER181C 324 nt-0.61□□□□□ -2.51
VPS45P38932 YNL097C-BYNL097C-B 123 nt-0.61□□□□□ -2.51
VPS45P38932 snR49snR49 165 nt-0.63□□□□□ -2.51
VPS45P38932 YJL077W-AYJL077W-A 87 nt-0.64□□□□□ -2.51
VPS45P38932 snR39BsnR39B 96 nt-0.64□□□□□ -2.51
VPS45P38932 snR56snR56 88 nt-0.65□□□□□ -2.51
VPS45P38932 snR50snR50 90 nt-0.65□□□□□ -2.51
VPS45P38932 YOR302WYOR302W 78 nt-0.66□□□□□ -2.52
VPS45P38932 tM(CAU)Q2tM(CAU)Q2 78 nt-0.67□□□□□ -2.52
VPS45P38932 YNL266WYNL266W 420 nt-0.67□□□□□ -2.52
VPS45P38932 tR(ACG)Q2tR(ACG)Q2 74 nt-0.68□□□□□ -2.52
VPS45P38932 YOR329W-AYOR329W-A 210 nt-0.68□□□□□ -2.52
VPS45P38932 YPL152W-AYPL152W-A 99 nt-0.71□□□□□ -2.52
VPS45P38932 snR65snR65 100 nt-0.72□□□□□ -2.52
VPS45P38932 YER090C-AYER090C-A 90 nt-0.72□□□□□ -2.52
VPS45P38932 JLP2YMR132C 627 nt-0.72□□□□□ -2.52
VPS45P38932 PMP2YEL017C-A 132 nt-0.73□□□□□ -2.53
VPS45P38932 YOL155W-AYOL155W-A 135 nt-0.73□□□□□ -2.53
VPS45P38932 YGR146C-AYGR146C-A 162 nt-0.75□□□□□ -2.53
VPS45P38932 RDS3YPR094W 324 nt-0.75□□□□□ -2.53
VPS45P38932 snR33snR33 183 nt-0.75□□□□□ -2.53
VPS45P38932 YHL009W-BYHL009W-B 5409 nt-0.8□□□□□ -2.54
VPS45P38932 snR80snR80 171 nt-0.82□□□□□ -2.54
VPS45P38932 YBR178WYBR178W 375 nt-0.82□□□□□ -2.54
VPS45P38932 tD(GUC)QtD(GUC)Q 75 nt-0.84□□□□□ -2.54
VPS45P38932 tL(UAA)QtL(UAA)Q 85 nt-0.84□□□□□ -2.54
VPS45P38932 snR52snR52 92 nt-0.84□□□□□ -2.54
VPS45P38932 tT(UGU)G1tT(UGU)G1 72 nt-0.86□□□□□ -2.55
VPS45P38932 tT(UGU)G2tT(UGU)G2 72 nt-0.86□□□□□ -2.55
VPS45P38932 tT(UGU)PtT(UGU)P 72 nt-0.86□□□□□ -2.55
VPS45P38932 YOR231C-AYOR231C-A 201 nt-0.86□□□□□ -2.55
VPS45P38932 YGL188C-AYGL188C-A 141 nt-0.88□□□□□ -2.55
VPS45P38932 YLR286W-AYLR286W-A 135 nt-0.88□□□□□ -2.55
VPS45P38932 SKI7YOR076C 2244 nt-0.88□□□□□ -2.55
VPS45P38932 snR48snR48 113 nt-0.9□□□□□ -2.55
VPS45P38932 snR67snR67 82 nt-0.91□□□□□ -2.56
VPS45P38932 YDR524W-CYDR524W-C 90 nt-0.91□□□□□ -2.56
VPS45P38932 YDL159C-BYDL159C-B 177 nt-0.93□□□□□ -2.56
VPS45P38932 snR161snR161 161 nt-0.93□□□□□ -2.56
VPS45P38932 YNL205CYNL205C 423 nt-0.94□□□□□ -2.56
VPS45P38932 YLR342W-AYLR342W-A 174 nt-0.98□□□□□ -2.57
VPS45P38932 tP(UGG)QtP(UGG)Q 72 nt-1□□□□□ -2.57
VPS45P38932 YHL015W-AYHL015W-A 84 nt-1□□□□□ -2.57
VPS45P38932 YOR102WYOR102W 351 nt-1.02□□□□□ -2.57
VPS45P38932 YBL053WYBL053W 375 nt-1.04□□□□□ -2.58
VPS45P38932 YNL198CYNL198C 303 nt-1.07□□□□□ -2.58
VPS45P38932 YLR299C-AYLR299C-A 93 nt-1.08□□□□□ -2.58
VPS45P38932 YBR196C-AYBR196C-A 150 nt-1.1□□□□□ -2.59
VPS45P38932 YML054C-AYML054C-A 159 nt-1.12□□□□□ -2.59
VPS45P38932 YJL150WYJL150W 303 nt-1.15□□□□□ -2.59
VPS45P38932 YDR406W-AYDR406W-A 246 nt-1.16□□□□□ -2.6
VPS45P38932 snR77snR77 88 nt-1.21□□□□□ -2.6
VPS45P38932 YBR223W-AYBR223W-A 120 nt-1.22□□□□□ -2.6
VPS45P38932 CDC65tQ(CUG)M 72 nt-1.25□□□□□ -2.61
VPS45P38932 YOR376W-AYOR376W-A 156 nt-1.25□□□□□ -2.61
VPS45P38932 SOM1YEL059C-A 225 nt-1.28□□□□□ -2.61
VPS45P38932 YHR180C-BYHR180C-B 105 nt-1.29□□□□□ -2.62
VPS45P38932 YGR240C-AYGR240C-A 201 nt-1.33□□□□□ -2.62
VPS45P38932 YNR077CYNR077C 255 nt-1.37□□□□□ -2.63
VPS45P38932 YMR315W-AYMR315W-A 108 nt-1.39□□□□□ -2.63
VPS45P38932 SPG3YDR504C 384 nt-1.4□□□□□ -2.63
VPS45P38932 YCR095W-AYCR095W-A 159 nt-1.43□□□□□ -2.64
VPS45P38932 Q0142Q0142 177 nt-1.43□□□□□ -2.64
VPS45P38932 tY(GUA)QtY(GUA)Q 84 nt-1.44□□□□□ -2.64
VPS45P38932 snR81snR81 201 nt-1.45□□□□□ -2.64
VPS45P38932 YKL106C-AYKL106C-A 120 nt-1.47□□□□□ -2.64
VPS45P38932 YBR109W-AYBR109W-A 225 nt-1.47□□□□□ -2.64
VPS45P38932 YMR046W-AYMR046W-A 129 nt-1.48□□□□□ -2.65
VPS45P38932 YOL083C-AYOL083C-A 141 nt-1.48□□□□□ -2.65
VPS45P38932 YGR151CYGR151C 336 nt-1.49□□□□□ -2.65
VPS45P38932 YBL071C-BYBL071C-B 99 nt-1.5□□□□□ -2.65
VPS45P38932 YOR316C-AYOR316C-A 210 nt-1.51□□□□□ -2.65
VPS45P38932 snR38snR38 95 nt-1.51□□□□□ -2.65
VPS45P38932 RPL41AYDL184C 78 nt-1.54□□□□□ -2.66
VPS45P38932 YBR296C-AYBR296C-A 120 nt-1.54□□□□□ -2.66
VPS45P38932 YCL001W-BYCL001W-B 255 nt-1.56□□□□□ -2.66
VPS45P38932 YLR466C-BYLR466C-B 117 nt-1.6□□□□□ -2.67
VPS45P38932 YOL164W-AYOL164W-A 183 nt-1.61□□□□□ -2.67
VPS45P38932 YNL338WYNL338W 159 nt-1.64□□□□□ -2.67
VPS45P38932 YOR309CYOR309C 381 nt-1.64□□□□□ -2.67
VPS45P38932 snR47snR47 99 nt-1.66□□□□□ -2.68
VPS45P38932 tM(CAU)Q1tM(CAU)Q1 76 nt-1.7□□□□□ -2.68
VPS45P38932 YAL037C-AYAL037C-A 93 nt-1.72□□□□□ -2.68
VPS45P38932 tS(GCU)Q1tS(GCU)Q1 86 nt-1.81□□□□□ -2.7
VPS45P38932 YNL337WYNL337W 255 nt-1.83□□□□□ -2.7
VPS45P38932 snR6snR6 112 nt-1.84□□□□□ -2.7
VPS45P38932 YBL100W-CYBL100W-C 120 nt-1.86□□□□□ -2.71
VPS45P38932 YOR335W-AYOR335W-A 81 nt-1.9□□□□□ -2.71
VPS45P38932 YKL225WYKL225W 348 nt-1.91□□□□□ -2.72
VPS45P38932 snR73snR73 106 nt-1.99□□□□□ -2.73
VPS45P38932 YGL041C-BYGL041C-B 183 nt-2.02□□□□□ -2.73
VPS45P38932 tV(UAC)QtV(UAC)Q 76 nt-2.03□□□□□ -2.73
VPS45P38932 YNL103W-AYNL103W-A 90 nt-2.03□□□□□ -2.73
VPS45P38932 YDL114W-AYDL114W-A 114 nt-2.04□□□□□ -2.74
VPS45P38932 RPL41BYDL133C-A 78 nt-2.1□□□□□ -2.75
VPS45P38932 YDR034C-AYDR034C-A 177 nt-2.11□□□□□ -2.75
VPS45P38932 YDL159W-AYDL159W-A 132 nt-2.14□□□□□ -2.75
VPS45P38932 YBR126W-BYBR126W-B 144 nt-2.14□□□□□ -2.75
VPS45P38932 YGL007C-AYGL007C-A 87 nt-2.15□□□□□ -2.75
VPS45P38932 Q0032Q0032 291 nt-2.16□□□□□ -2.76
Retrieved 100 of 7,029 protein–RNA pairs in 63 ms