Protein–RNA interactions for Protein: P38249

RPG1, Eukaryotic translation initiation factor 3 subunit A, yeastyeast

Known RBP Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPG1P38249 TRM732YMR259C 4263 nt2.53□□□□□ -2.01
RPG1P38249 IRA2YOL081W 9240 nt2.52□□□□□ -2.01
RPG1P38249 VPS13YLL040C 9435 nt2.5□□□□□ -2.01
RPG1P38249 DNF1YER166W 4716 nt2.5□□□□□ -2.01
RPG1P38249 PEP1YBL017C 4740 nt2.5□□□□□ -2.01
RPG1P38249 YOR316C-AYOR316C-A 210 nt2.47□□□□□ -2.01
RPG1P38249 CFT1YDR301W 4074 nt2.46□□□□□ -2.02
RPG1P38249 VAM6YDL077C 3150 nt2.45□□□□□ -2.02
RPG1P38249 CDC39YCR093W 6327 nt2.44□□□□□ -2.02
RPG1P38249 YGR130CYGR130C 2451 nt2.44□□□□□ -2.02
RPG1P38249 SSK2YNR031C 4740 nt2.44□□□□□ -2.02
RPG1P38249 PAU24YBR301W 363 nt2.43□□□□□ -2.02
RPG1P38249 SPP41YDR464W 4308 nt2.42□□□□□ -2.02
RPG1P38249 SEC16YPL085W 6588 nt2.41□□□□□ -2.02
RPG1P38249 YPR117WYPR117W 7470 nt2.41□□□□□ -2.02
RPG1P38249 SOV1YMR066W 2697 nt2.39□□□□□ -2.03
RPG1P38249 FAB1YFR019W 6837 nt2.38□□□□□ -2.03
RPG1P38249 USO1YDL058W 5373 nt2.38□□□□□ -2.03
RPG1P38249 MON2YNL297C 4911 nt2.36□□□□□ -2.03
RPG1P38249 BST1YFL025C 3090 nt2.36□□□□□ -2.03
RPG1P38249 SBH2YER019C-A 267 nt2.34□□□□□ -2.03
RPG1P38249 PMD1YER132C 5262 nt2.34□□□□□ -2.04
RPG1P38249 YMR272W-BYMR272W-B 108 nt2.31□□□□□ -2.04
RPG1P38249 YOR093CYOR093C 4947 nt2.25□□□□□ -2.05
RPG1P38249 TOR2YKL203C 7425 nt2.22□□□□□ -2.05
RPG1P38249 TMA7YLR262C-A 195 nt2.2□□□□□ -2.06
RPG1P38249 FKS1YLR342W 5631 nt2.16□□□□□ -2.06
RPG1P38249 YMR045CYMR045C 5268 nt2.15□□□□□ -2.07
RPG1P38249 CCH1YGR217W 6120 nt2.14□□□□□ -2.07
RPG1P38249 tC(GCA)QtC(GCA)Q 76 nt2.13□□□□□ -2.07
RPG1P38249 YOR192C-BYOR192C-B 5313 nt2.08□□□□□ -2.08
RPG1P38249 BRR2YER172C 6492 nt2.07□□□□□ -2.08
RPG1P38249 DNF3YMR162C 4971 nt2.05□□□□□ -2.08
RPG1P38249 YHR214C-BYHR214C-B 5382 nt2.04□□□□□ -2.08
RPG1P38249 YJR029WYJR029W 5268 nt2□□□□□ -2.09
RPG1P38249 tT(UGU)HtT(UGU)H 72 nt1.98□□□□□ -2.09
RPG1P38249 BUD3YCL014W 4911 nt1.95□□□□□ -2.1
RPG1P38249 VPS15YBR097W 4365 nt1.95□□□□□ -2.1
RPG1P38249 YBL100W-BYBL100W-B 5313 nt1.94□□□□□ -2.1
RPG1P38249 YPR137C-BYPR137C-B 5268 nt1.94□□□□□ -2.1
RPG1P38249 LTE1YAL024C 4308 nt1.92□□□□□ -2.1
RPG1P38249 YML100W-AYML100W-A 174 nt1.9□□□□□ -2.11
RPG1P38249 YMR247W-AYMR247W-A 144 nt1.9□□□□□ -2.11
RPG1P38249 YJL113WYJL113W 4647 nt1.89□□□□□ -2.11
RPG1P38249 IRA1YBR140C 9279 nt1.86□□□□□ -2.11
RPG1P38249 HKR1YDR420W 5409 nt1.85□□□□□ -2.11
RPG1P38249 FIG2YCR089W 4830 nt1.83□□□□□ -2.12
RPG1P38249 RPL41BYDL133C-A 78 nt1.82□□□□□ -2.12
RPG1P38249 tF(GAA)BtF(GAA)B 73 nt1.82□□□□□ -2.12
RPG1P38249 tF(GAA)FtF(GAA)F 73 nt1.82□□□□□ -2.12
RPG1P38249 tF(GAA)GtF(GAA)G 73 nt1.82□□□□□ -2.12
RPG1P38249 tF(GAA)H1tF(GAA)H1 73 nt1.82□□□□□ -2.12
RPG1P38249 tF(GAA)H2tF(GAA)H2 73 nt1.82□□□□□ -2.12
RPG1P38249 tF(GAA)MtF(GAA)M 73 nt1.82□□□□□ -2.12
RPG1P38249 tF(GAA)P1tF(GAA)P1 73 nt1.82□□□□□ -2.12
RPG1P38249 tF(GAA)P2tF(GAA)P2 73 nt1.82□□□□□ -2.12
RPG1P38249 YOL014WYOL014W 375 nt1.82□□□□□ -2.12
RPG1P38249 RKR1YMR247C 4689 nt1.81□□□□□ -2.12
RPG1P38249 MYO1YHR023W 5787 nt1.81□□□□□ -2.12
RPG1P38249 IML1YJR138W 4755 nt1.8□□□□□ -2.12
RPG1P38249 tQ(UUG)E2tQ(UUG)E2 72 nt1.78□□□□□ -2.12
RPG1P38249 MEC1YBR136W 7107 nt1.78□□□□□ -2.13
RPG1P38249 tH(GUG)E1tH(GUG)E1 72 nt1.71□□□□□ -2.14
RPG1P38249 tH(GUG)E2tH(GUG)E2 72 nt1.71□□□□□ -2.14
RPG1P38249 tH(GUG)G1tH(GUG)G1 72 nt1.71□□□□□ -2.14
RPG1P38249 tH(GUG)G2tH(GUG)G2 72 nt1.71□□□□□ -2.14
RPG1P38249 tH(GUG)HtH(GUG)H 72 nt1.71□□□□□ -2.14
RPG1P38249 tH(GUG)KtH(GUG)K 72 nt1.71□□□□□ -2.14
RPG1P38249 tH(GUG)MtH(GUG)M 72 nt1.71□□□□□ -2.14
RPG1P38249 SCC2YDR180W 4482 nt1.69□□□□□ -2.14
RPG1P38249 ESP1YGR098C 4893 nt1.64□□□□□ -2.15
RPG1P38249 YKL145W-AYKL145W-A 93 nt1.64□□□□□ -2.15
RPG1P38249 BEM2YER155C 6504 nt1.64□□□□□ -2.15
RPG1P38249 MLP1YKR095W 5628 nt1.62□□□□□ -2.15
RPG1P38249 snR58snR58 96 nt1.6□□□□□ -2.15
RPG1P38249 tV(UAC)BtV(UAC)B 74 nt1.6□□□□□ -2.15
RPG1P38249 tV(UAC)DtV(UAC)D 74 nt1.6□□□□□ -2.15
RPG1P38249 THO2YNL139C 4794 nt1.59□□□□□ -2.16
RPG1P38249 FMP27YLR454W 7887 nt1.57□□□□□ -2.16
RPG1P38249 YOR186C-AYOR186C-A 210 nt1.54□□□□□ -2.16
RPG1P38249 YOR335W-AYOR335W-A 81 nt1.54□□□□□ -2.16
RPG1P38249 DOP1YDR141C 5097 nt1.51□□□□□ -2.17
RPG1P38249 IQG1YPL242C 4488 nt1.5□□□□□ -2.17
RPG1P38249 UTP20YBL004W 7482 nt1.45□□□□□ -2.18
RPG1P38249 snR6snR6 112 nt1.44□□□□□ -2.18
RPG1P38249 PAU9YBL108C-A 129 nt1.36□□□□□ -2.19
RPG1P38249 YMR272W-AYMR272W-A 114 nt1.27□□□□□ -2.21
RPG1P38249 snR73snR73 106 nt1.19□□□□□ -2.22
RPG1P38249 EMT1tM(CAU)D 73 nt1.11□□□□□ -2.23
RPG1P38249 EMT5tM(CAU)J1 73 nt1.11□□□□□ -2.23
RPG1P38249 EMT3tM(CAU)J2 73 nt1.11□□□□□ -2.23
RPG1P38249 EMT4tM(CAU)M 73 nt1.11□□□□□ -2.23
RPG1P38249 EMT2tM(CAU)O2 73 nt1.11□□□□□ -2.23
RPG1P38249 snR161snR161 161 nt1.1□□□□□ -2.23
RPG1P38249 snR128snR128 126 nt1.02□□□□□ -2.25
RPG1P38249 UTP10YJL109C 5310 nt0.99□□□□□ -2.25
RPG1P38249 tA(UGC)QtA(UGC)Q 76 nt0.98□□□□□ -2.25
RPG1P38249 tT(AGU)BtT(AGU)B 73 nt0.94□□□□□ -2.26
RPG1P38249 tT(AGU)CtT(AGU)C 73 nt0.94□□□□□ -2.26
RPG1P38249 tT(AGU)DtT(AGU)D 73 nt0.94□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 52.7 ms