Protein–RNA interactions for Protein: P38203

LSM2, U6 snRNA-associated Sm-like protein LSm2, yeastyeast

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM2P38203 YBR196C-AYBR196C-A 150 nt-3.08□□□□□ -2.9
LSM2P38203 YGL041CYGL041C 204 nt-3.09□□□□□ -2.9
LSM2P38203 tW(UCA)QtW(UCA)Q 74 nt-3.09□□□□□ -2.9
LSM2P38203 YOR316C-AYOR316C-A 210 nt-3.1□□□□□ -2.91
LSM2P38203 YOL038C-AYOL038C-A 96 nt-3.14□□□□□ -2.91
LSM2P38203 snR41snR41 95 nt-3.16□□□□□ -2.92
LSM2P38203 YEL014CYEL014C 306 nt-3.17□□□□□ -2.92
LSM2P38203 YOR329W-AYOR329W-A 210 nt-3.17□□□□□ -2.92
LSM2P38203 YLR299C-AYLR299C-A 93 nt-3.19□□□□□ -2.92
LSM2P38203 YPR197CYPR197C 564 nt-3.19□□□□□ -2.92
LSM2P38203 YAL016C-BYAL016C-B 186 nt-3.2□□□□□ -2.92
LSM2P38203 snR78snR78 87 nt-3.21□□□□□ -2.92
LSM2P38203 YPR012WYPR012W 255 nt-3.22□□□□□ -2.92
LSM2P38203 HTL1YCR020W-B 237 nt-3.23□□□□□ -2.93
LSM2P38203 YHR180C-BYHR180C-B 105 nt-3.28□□□□□ -2.93
LSM2P38203 YJL047C-AYJL047C-A 135 nt-3.28□□□□□ -2.93
LSM2P38203 STE18YJR086W 333 nt-3.28□□□□□ -2.93
LSM2P38203 YOL013W-BYOL013W-B 291 nt-3.29□□□□□ -2.94
LSM2P38203 snR6snR6 112 nt-3.31□□□□□ -2.94
LSM2P38203 YLR222C-AYLR222C-A 231 nt-3.31□□□□□ -2.94
LSM2P38203 snR55snR55 98 nt-3.32□□□□□ -2.94
LSM2P38203 YNL122CYNL122C 348 nt-3.32□□□□□ -2.94
LSM2P38203 YKL106C-AYKL106C-A 120 nt-3.34□□□□□ -2.94
LSM2P38203 BIL1YOR304C-A 231 nt-3.39□□□□□ -2.95
LSM2P38203 Q0255Q0255 1419 nt-3.39□□□□□ -2.95
LSM2P38203 YER181CYER181C 324 nt-3.43□□□□□ -2.96
LSM2P38203 YKL123WYKL123W 381 nt-3.44□□□□□ -2.96
LSM2P38203 YOL155W-AYOL155W-A 135 nt-3.46□□□□□ -2.96
LSM2P38203 snR73snR73 106 nt-3.49□□□□□ -2.97
LSM2P38203 YBR131C-AYBR131C-A 90 nt-3.52□□□□□ -2.97
LSM2P38203 YOR335W-AYOR335W-A 81 nt-3.53□□□□□ -2.97
LSM2P38203 YLR285C-AYLR285C-A 171 nt-3.55□□□□□ -2.98
LSM2P38203 YOR102WYOR102W 351 nt-3.55□□□□□ -2.98
LSM2P38203 YDR413CYDR413C 576 nt-3.57□□□□□ -2.98
LSM2P38203 snR80snR80 171 nt-3.6□□□□□ -2.99
LSM2P38203 YBR109W-AYBR109W-A 225 nt-3.61□□□□□ -2.99
LSM2P38203 snR48snR48 113 nt-3.62□□□□□ -2.99
LSM2P38203 tF(GAA)QtF(GAA)Q 75 nt-3.63□□□□□ -2.99
LSM2P38203 YGL188C-AYGL188C-A 141 nt-3.64□□□□□ -2.99
LSM2P38203 YJL150WYJL150W 303 nt-3.64□□□□□ -2.99
LSM2P38203 YDR524C-AYDR524C-A 120 nt-3.67□□□□□ -3
LSM2P38203 tL(UAA)QtL(UAA)Q 85 nt-3.67□□□□□ -3
LSM2P38203 YKL118WYKL118W 312 nt-3.7□□□□□ -3
LSM2P38203 YOL166W-AYOL166W-A 156 nt-3.7□□□□□ -3
LSM2P38203 YDR183C-AYDR183C-A 258 nt-3.71□□□□□ -3
LSM2P38203 YGR035CYGR035C 351 nt-3.71□□□□□ -3
LSM2P38203 YPL038W-AYPL038W-A 192 nt-3.71□□□□□ -3
LSM2P38203 RPL41BYDL133C-A 78 nt-3.73□□□□□ -3.01
LSM2P38203 YNL097C-BYNL097C-B 123 nt-3.74□□□□□ -3.01
LSM2P38203 Q0142Q0142 177 nt-3.75□□□□□ -3.01
LSM2P38203 YAL063C-AYAL063C-A 291 nt-3.79□□□□□ -3.02
LSM2P38203 YBR296C-AYBR296C-A 120 nt-3.85□□□□□ -3.03
LSM2P38203 GIM4YEL003W 336 nt-3.88□□□□□ -3.03
LSM2P38203 snR38snR38 95 nt-3.91□□□□□ -3.04
LSM2P38203 RPL41AYDL184C 78 nt-3.92□□□□□ -3.04
LSM2P38203 YNR025CYNR025C 360 nt-3.94□□□□□ -3.04
LSM2P38203 snR56snR56 88 nt-4□□□□□ -3.05
LSM2P38203 YNL337WYNL337W 255 nt-4.08□□□□□ -3.06
LSM2P38203 YHL015W-AYHL015W-A 84 nt-4.09□□□□□ -3.06
LSM2P38203 YNL198CYNL198C 303 nt-4.1□□□□□ -3.07
LSM2P38203 YNL277W-AYNL277W-A 189 nt-4.12□□□□□ -3.07
LSM2P38203 YDR406W-AYDR406W-A 246 nt-4.13□□□□□ -3.07
LSM2P38203 YJR162CYJR162C 351 nt-4.14□□□□□ -3.07
LSM2P38203 YOR302WYOR302W 78 nt-4.17□□□□□ -3.08
LSM2P38203 snR87snR87 109 nt-4.19□□□□□ -3.08
LSM2P38203 snR52snR52 92 nt-4.21□□□□□ -3.08
LSM2P38203 RPL39YJL189W 156 nt-4.24□□□□□ -3.09
LSM2P38203 tV(UAC)QtV(UAC)Q 76 nt-4.27□□□□□ -3.09
LSM2P38203 snR85snR85 171 nt-4.31□□□□□ -3.1
LSM2P38203 SOM1YEL059C-A 225 nt-4.31□□□□□ -3.1
LSM2P38203 YDL114W-AYDL114W-A 114 nt-4.38□□□□□ -3.11
LSM2P38203 YBL071C-BYBL071C-B 99 nt-4.38□□□□□ -3.11
LSM2P38203 YOL164W-AYOL164W-A 183 nt-4.43□□□□□ -3.12
LSM2P38203 snR47snR47 99 nt-4.5□□□□□ -3.13
LSM2P38203 YCR095W-AYCR095W-A 159 nt-4.51□□□□□ -3.13
LSM2P38203 YGR151CYGR151C 336 nt-4.54□□□□□ -3.14
LSM2P38203 tR(UCU)Q1tR(UCU)Q1 73 nt-4.55□□□□□ -3.14
LSM2P38203 YDL240C-AYDL240C-A 138 nt-4.59□□□□□ -3.14
LSM2P38203 YBL053WYBL053W 375 nt-4.63□□□□□ -3.15
LSM2P38203 YPL152W-AYPL152W-A 99 nt-4.67□□□□□ -3.16
LSM2P38203 SPG3YDR504C 384 nt-4.69□□□□□ -3.16
LSM2P38203 YKL225WYKL225W 348 nt-4.71□□□□□ -3.16
LSM2P38203 YAL037C-AYAL037C-A 93 nt-4.77□□□□□ -3.17
LSM2P38203 YKL096C-BYKL096C-B 150 nt-4.77□□□□□ -3.17
LSM2P38203 YDR157WYDR157W 402 nt-4.78□□□□□ -3.17
LSM2P38203 YBL100W-CYBL100W-C 120 nt-4.8□□□□□ -3.18
LSM2P38203 YDR118W-AYDR118W-A 117 nt-4.81□□□□□ -3.18
LSM2P38203 YEL050W-AYEL050W-A 192 nt-4.84□□□□□ -3.18
LSM2P38203 snR58snR58 96 nt-4.85□□□□□ -3.19
LSM2P38203 tS(GCU)Q1tS(GCU)Q1 86 nt-4.86□□□□□ -3.19
LSM2P38203 YHR175W-AYHR175W-A 150 nt-4.86□□□□□ -3.19
LSM2P38203 snR65snR65 100 nt-4.98□□□□□ -3.21
LSM2P38203 YGR122C-AYGR122C-A 129 nt-5.08□□□□□ -3.22
LSM2P38203 YDL159W-AYDL159W-A 132 nt-5.1□□□□□ -3.23
LSM2P38203 YDR034C-AYDR034C-A 177 nt-5.1□□□□□ -3.23
LSM2P38203 YJL136W-AYJL136W-A 84 nt-5.15□□□□□ -3.23
LSM2P38203 YCL001W-BYCL001W-B 255 nt-5.28□□□□□ -3.25
LSM2P38203 YGL007C-AYGL007C-A 87 nt-5.44□□□□□ -3.28
LSM2P38203 Q0017Q0017 162 nt-5.46□□□□□ -3.28
LSM2P38203 YNL170WYNL170W 396 nt-5.51□□□□□ -3.29
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms