Protein–RNA interactions for Protein: P38192

RRT1, Regulator of rDNA transcription protein 1, yeastyeast

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRT1P38192 snR39BsnR39B 96 nt-1.23□□□□□ -2.61
RRT1P38192 JLP2YMR132C 627 nt-1.25□□□□□ -2.61
RRT1P38192 tF(GAA)QtF(GAA)Q 75 nt-1.26□□□□□ -2.61
RRT1P38192 YFL019CYFL019C 354 nt-1.26□□□□□ -2.61
RRT1P38192 snR161snR161 161 nt-1.26□□□□□ -2.61
RRT1P38192 YDR413CYDR413C 576 nt-1.28□□□□□ -2.61
RRT1P38192 YBR131C-AYBR131C-A 90 nt-1.28□□□□□ -2.61
RRT1P38192 YDL240C-AYDL240C-A 138 nt-1.29□□□□□ -2.62
RRT1P38192 YER181CYER181C 324 nt-1.29□□□□□ -2.62
RRT1P38192 snR67snR67 82 nt-1.31□□□□□ -2.62
RRT1P38192 YDR118W-AYDR118W-A 117 nt-1.33□□□□□ -2.62
RRT1P38192 YKL118WYKL118W 312 nt-1.34□□□□□ -2.62
RRT1P38192 YNL277W-AYNL277W-A 189 nt-1.34□□□□□ -2.62
RRT1P38192 tD(GUC)QtD(GUC)Q 75 nt-1.35□□□□□ -2.63
RRT1P38192 YOR329W-AYOR329W-A 210 nt-1.35□□□□□ -2.63
RRT1P38192 tP(UGG)QtP(UGG)Q 72 nt-1.36□□□□□ -2.63
RRT1P38192 VAR1Q0140 1197 nt-1.37□□□□□ -2.63
RRT1P38192 YBR223W-AYBR223W-A 120 nt-1.37□□□□□ -2.63
RRT1P38192 snR55snR55 98 nt-1.38□□□□□ -2.63
RRT1P38192 YLR286W-AYLR286W-A 135 nt-1.38□□□□□ -2.63
RRT1P38192 SKI7YOR076C 2244 nt-1.41□□□□□ -2.64
RRT1P38192 GIM4YEL003W 336 nt-1.43□□□□□ -2.64
RRT1P38192 YBR178WYBR178W 375 nt-1.43□□□□□ -2.64
RRT1P38192 YPR012WYPR012W 255 nt-1.45□□□□□ -2.64
RRT1P38192 YDL159C-BYDL159C-B 177 nt-1.46□□□□□ -2.64
RRT1P38192 YNL097C-BYNL097C-B 123 nt-1.47□□□□□ -2.64
RRT1P38192 YNL205CYNL205C 423 nt-1.48□□□□□ -2.65
RRT1P38192 YML054C-AYML054C-A 159 nt-1.54□□□□□ -2.66
RRT1P38192 YOL155W-AYOL155W-A 135 nt-1.54□□□□□ -2.66
RRT1P38192 YNR077CYNR077C 255 nt-1.56□□□□□ -2.66
RRT1P38192 snR48snR48 113 nt-1.56□□□□□ -2.66
RRT1P38192 YOR102WYOR102W 351 nt-1.59□□□□□ -2.66
RRT1P38192 YOR302WYOR302W 78 nt-1.61□□□□□ -2.67
RRT1P38192 YGL188C-AYGL188C-A 141 nt-1.62□□□□□ -2.67
RRT1P38192 YLR299C-AYLR299C-A 93 nt-1.64□□□□□ -2.67
RRT1P38192 tL(UAA)QtL(UAA)Q 85 nt-1.65□□□□□ -2.67
RRT1P38192 CDC65tQ(CUG)M 72 nt-1.66□□□□□ -2.68
RRT1P38192 YGR240C-AYGR240C-A 201 nt-1.66□□□□□ -2.68
RRT1P38192 YPL152W-AYPL152W-A 99 nt-1.67□□□□□ -2.68
RRT1P38192 snR65snR65 100 nt-1.68□□□□□ -2.68
RRT1P38192 snR52snR52 92 nt-1.68□□□□□ -2.68
RRT1P38192 YLR342W-AYLR342W-A 174 nt-1.69□□□□□ -2.68
RRT1P38192 YBR196C-AYBR196C-A 150 nt-1.71□□□□□ -2.68
RRT1P38192 snR77snR77 88 nt-1.74□□□□□ -2.69
RRT1P38192 YHL015W-AYHL015W-A 84 nt-1.74□□□□□ -2.69
RRT1P38192 tY(GUA)QtY(GUA)Q 84 nt-1.74□□□□□ -2.69
RRT1P38192 Q0144Q0144 330 nt-1.78□□□□□ -2.69
RRT1P38192 YMR315W-AYMR315W-A 108 nt-1.84□□□□□ -2.7
RRT1P38192 snR81snR81 201 nt-1.85□□□□□ -2.71
RRT1P38192 YOR376W-AYOR376W-A 156 nt-1.86□□□□□ -2.71
RRT1P38192 YHR175W-AYHR175W-A 150 nt-1.9□□□□□ -2.71
RRT1P38192 YHR180C-BYHR180C-B 105 nt-1.9□□□□□ -2.71
RRT1P38192 snR80snR80 171 nt-1.95□□□□□ -2.72
RRT1P38192 YNL198CYNL198C 303 nt-1.97□□□□□ -2.72
RRT1P38192 YOR231C-AYOR231C-A 201 nt-2□□□□□ -2.73
RRT1P38192 YJL150WYJL150W 303 nt-2.01□□□□□ -2.73
RRT1P38192 tR(ACG)Q2tR(ACG)Q2 74 nt-2.02□□□□□ -2.73
RRT1P38192 YOR316C-AYOR316C-A 210 nt-2.04□□□□□ -2.74
RRT1P38192 snR56snR56 88 nt-2.05□□□□□ -2.74
RRT1P38192 SOM1YEL059C-A 225 nt-2.05□□□□□ -2.74
RRT1P38192 YKL106C-AYKL106C-A 120 nt-2.05□□□□□ -2.74
RRT1P38192 YDR406W-AYDR406W-A 246 nt-2.06□□□□□ -2.74
RRT1P38192 YCR095W-AYCR095W-A 159 nt-2.18□□□□□ -2.76
RRT1P38192 YBL053WYBL053W 375 nt-2.18□□□□□ -2.76
RRT1P38192 YBR109W-AYBR109W-A 225 nt-2.21□□□□□ -2.76
RRT1P38192 YOR309CYOR309C 381 nt-2.22□□□□□ -2.76
RRT1P38192 YBR296C-AYBR296C-A 120 nt-2.22□□□□□ -2.76
RRT1P38192 RPL41AYDL184C 78 nt-2.23□□□□□ -2.77
RRT1P38192 YDR524W-CYDR524W-C 90 nt-2.24□□□□□ -2.77
RRT1P38192 YGR151CYGR151C 336 nt-2.37□□□□□ -2.79
RRT1P38192 YOL083C-AYOL083C-A 141 nt-2.37□□□□□ -2.79
RRT1P38192 snR38snR38 95 nt-2.39□□□□□ -2.79
RRT1P38192 YBL071C-BYBL071C-B 99 nt-2.43□□□□□ -2.8
RRT1P38192 YOL164W-AYOL164W-A 183 nt-2.47□□□□□ -2.8
RRT1P38192 YBR126W-BYBR126W-B 144 nt-2.48□□□□□ -2.81
RRT1P38192 YMR046W-AYMR046W-A 129 nt-2.49□□□□□ -2.81
RRT1P38192 snR47snR47 99 nt-2.55□□□□□ -2.82
RRT1P38192 snR6snR6 112 nt-2.56□□□□□ -2.82
RRT1P38192 YAL037C-AYAL037C-A 93 nt-2.57□□□□□ -2.82
RRT1P38192 YBL100W-CYBL100W-C 120 nt-2.59□□□□□ -2.82
RRT1P38192 YCL001W-BYCL001W-B 255 nt-2.62□□□□□ -2.83
RRT1P38192 SPG3YDR504C 384 nt-2.63□□□□□ -2.83
RRT1P38192 YOR335W-AYOR335W-A 81 nt-2.66□□□□□ -2.84
RRT1P38192 RPL41BYDL133C-A 78 nt-2.67□□□□□ -2.84
RRT1P38192 snR73snR73 106 nt-2.72□□□□□ -2.84
RRT1P38192 tM(CAU)Q1tM(CAU)Q1 76 nt-2.8□□□□□ -2.86
RRT1P38192 YKL225WYKL225W 348 nt-2.81□□□□□ -2.86
RRT1P38192 YLR466C-BYLR466C-B 117 nt-2.82□□□□□ -2.86
RRT1P38192 YDL114W-AYDL114W-A 114 nt-2.84□□□□□ -2.86
RRT1P38192 tS(GCU)Q1tS(GCU)Q1 86 nt-2.86□□□□□ -2.87
RRT1P38192 YNL337WYNL337W 255 nt-2.87□□□□□ -2.87
RRT1P38192 tV(UAC)QtV(UAC)Q 76 nt-2.88□□□□□ -2.87
RRT1P38192 snR85snR85 171 nt-2.92□□□□□ -2.88
RRT1P38192 YNL338WYNL338W 159 nt-2.92□□□□□ -2.88
RRT1P38192 Q0142Q0142 177 nt-3.1□□□□□ -2.91
RRT1P38192 YDR034C-AYDR034C-A 177 nt-3.14□□□□□ -2.91
RRT1P38192 YGL041C-BYGL041C-B 183 nt-3.14□□□□□ -2.91
RRT1P38192 YDR524C-AYDR524C-A 120 nt-3.18□□□□□ -2.92
RRT1P38192 YGR122C-AYGR122C-A 129 nt-3.19□□□□□ -2.92
RRT1P38192 YDR543CYDR543C 300 nt-3.2□□□□□ -2.92
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms