Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 snR55snR55 98 nt-0.74□□□□□ -2.53
MRPL40P36534 tM(CAU)Q2tM(CAU)Q2 78 nt-0.74□□□□□ -2.53
MRPL40P36534 snR49snR49 165 nt-0.75□□□□□ -2.53
MRPL40P36534 YNL097C-BYNL097C-B 123 nt-0.77□□□□□ -2.53
MRPL40P36534 YHL009W-BYHL009W-B 5409 nt-0.8□□□□□ -2.54
MRPL40P36534 YGR146C-AYGR146C-A 162 nt-0.82□□□□□ -2.54
MRPL40P36534 YHR175W-AYHR175W-A 150 nt-0.82□□□□□ -2.54
MRPL40P36534 snR39BsnR39B 96 nt-0.82□□□□□ -2.54
MRPL40P36534 snR65snR65 100 nt-0.83□□□□□ -2.54
MRPL40P36534 PMP2YEL017C-A 132 nt-0.84□□□□□ -2.54
MRPL40P36534 YER090C-AYER090C-A 90 nt-0.84□□□□□ -2.54
MRPL40P36534 YOL155W-AYOL155W-A 135 nt-0.84□□□□□ -2.54
MRPL40P36534 RDS3YPR094W 324 nt-0.84□□□□□ -2.54
MRPL40P36534 YNL266WYNL266W 420 nt-0.85□□□□□ -2.55
MRPL40P36534 YPL152W-AYPL152W-A 99 nt-0.85□□□□□ -2.55
MRPL40P36534 YOR329W-AYOR329W-A 210 nt-0.86□□□□□ -2.55
MRPL40P36534 snR50snR50 90 nt-0.86□□□□□ -2.55
MRPL40P36534 tT(UGU)G1tT(UGU)G1 72 nt-0.87□□□□□ -2.55
MRPL40P36534 tT(UGU)G2tT(UGU)G2 72 nt-0.87□□□□□ -2.55
MRPL40P36534 tT(UGU)PtT(UGU)P 72 nt-0.87□□□□□ -2.55
MRPL40P36534 YOR302WYOR302W 78 nt-0.88□□□□□ -2.55
MRPL40P36534 snR33snR33 183 nt-0.89□□□□□ -2.55
MRPL40P36534 tR(ACG)Q2tR(ACG)Q2 74 nt-0.91□□□□□ -2.56
MRPL40P36534 snR56snR56 88 nt-0.92□□□□□ -2.56
MRPL40P36534 YNR077CYNR077C 255 nt-0.93□□□□□ -2.56
MRPL40P36534 JLP2YMR132C 627 nt-0.96□□□□□ -2.56
MRPL40P36534 tD(GUC)QtD(GUC)Q 75 nt-0.99□□□□□ -2.57
MRPL40P36534 snR48snR48 113 nt-1□□□□□ -2.57
MRPL40P36534 YGL188C-AYGL188C-A 141 nt-1.01□□□□□ -2.57
MRPL40P36534 snR67snR67 82 nt-1.03□□□□□ -2.57
MRPL40P36534 YLR286W-AYLR286W-A 135 nt-1.04□□□□□ -2.58
MRPL40P36534 YNL205CYNL205C 423 nt-1.04□□□□□ -2.58
MRPL40P36534 YOR231C-AYOR231C-A 201 nt-1.05□□□□□ -2.58
MRPL40P36534 YBR178WYBR178W 375 nt-1.05□□□□□ -2.58
MRPL40P36534 tL(UAA)QtL(UAA)Q 85 nt-1.06□□□□□ -2.58
MRPL40P36534 snR161snR161 161 nt-1.08□□□□□ -2.58
MRPL40P36534 snR52snR52 92 nt-1.08□□□□□ -2.58
MRPL40P36534 YDL159C-BYDL159C-B 177 nt-1.1□□□□□ -2.59
MRPL40P36534 YLR342W-AYLR342W-A 174 nt-1.1□□□□□ -2.59
MRPL40P36534 snR80snR80 171 nt-1.11□□□□□ -2.59
MRPL40P36534 YDR524W-CYDR524W-C 90 nt-1.11□□□□□ -2.59
MRPL40P36534 SKI7YOR076C 2244 nt-1.11□□□□□ -2.59
MRPL40P36534 YOR102WYOR102W 351 nt-1.14□□□□□ -2.59
MRPL40P36534 YBR223W-AYBR223W-A 120 nt-1.15□□□□□ -2.59
MRPL40P36534 YHL015W-AYHL015W-A 84 nt-1.16□□□□□ -2.6
MRPL40P36534 YLR299C-AYLR299C-A 93 nt-1.26□□□□□ -2.61
MRPL40P36534 YBR196C-AYBR196C-A 150 nt-1.26□□□□□ -2.61
MRPL40P36534 tP(UGG)QtP(UGG)Q 72 nt-1.27□□□□□ -2.61
MRPL40P36534 YML054C-AYML054C-A 159 nt-1.31□□□□□ -2.62
MRPL40P36534 YDR406W-AYDR406W-A 246 nt-1.34□□□□□ -2.62
MRPL40P36534 YNL198CYNL198C 303 nt-1.37□□□□□ -2.63
MRPL40P36534 YJL150WYJL150W 303 nt-1.45□□□□□ -2.64
MRPL40P36534 YBL053WYBL053W 375 nt-1.45□□□□□ -2.64
MRPL40P36534 YGR240C-AYGR240C-A 201 nt-1.48□□□□□ -2.65
MRPL40P36534 SOM1YEL059C-A 225 nt-1.49□□□□□ -2.65
MRPL40P36534 CDC65tQ(CUG)M 72 nt-1.49□□□□□ -2.65
MRPL40P36534 YHR180C-BYHR180C-B 105 nt-1.52□□□□□ -2.65
MRPL40P36534 snR77snR77 88 nt-1.53□□□□□ -2.65
MRPL40P36534 YOR376W-AYOR376W-A 156 nt-1.55□□□□□ -2.66
MRPL40P36534 YCR095W-AYCR095W-A 159 nt-1.6□□□□□ -2.67
MRPL40P36534 YMR046W-AYMR046W-A 129 nt-1.62□□□□□ -2.67
MRPL40P36534 tY(GUA)QtY(GUA)Q 84 nt-1.68□□□□□ -2.68
MRPL40P36534 YMR315W-AYMR315W-A 108 nt-1.68□□□□□ -2.68
MRPL40P36534 Q0142Q0142 177 nt-1.69□□□□□ -2.68
MRPL40P36534 SPG3YDR504C 384 nt-1.71□□□□□ -2.68
MRPL40P36534 YKL106C-AYKL106C-A 120 nt-1.72□□□□□ -2.68
MRPL40P36534 snR81snR81 201 nt-1.74□□□□□ -2.69
MRPL40P36534 YOR316C-AYOR316C-A 210 nt-1.74□□□□□ -2.69
MRPL40P36534 YBR296C-AYBR296C-A 120 nt-1.78□□□□□ -2.69
MRPL40P36534 YGR151CYGR151C 336 nt-1.79□□□□□ -2.7
MRPL40P36534 YBR109W-AYBR109W-A 225 nt-1.79□□□□□ -2.7
MRPL40P36534 RPL41AYDL184C 78 nt-1.82□□□□□ -2.7
MRPL40P36534 YOL083C-AYOL083C-A 141 nt-1.82□□□□□ -2.7
MRPL40P36534 tM(CAU)Q1tM(CAU)Q1 76 nt-1.85□□□□□ -2.71
MRPL40P36534 YBL071C-BYBL071C-B 99 nt-1.85□□□□□ -2.71
MRPL40P36534 snR38snR38 95 nt-1.9□□□□□ -2.71
MRPL40P36534 YCL001W-BYCL001W-B 255 nt-1.91□□□□□ -2.72
MRPL40P36534 YLR466C-BYLR466C-B 117 nt-1.94□□□□□ -2.72
MRPL40P36534 YOL164W-AYOL164W-A 183 nt-1.94□□□□□ -2.72
MRPL40P36534 YAL037C-AYAL037C-A 93 nt-1.98□□□□□ -2.73
MRPL40P36534 snR47snR47 99 nt-2.03□□□□□ -2.73
MRPL40P36534 YNL338WYNL338W 159 nt-2.05□□□□□ -2.74
MRPL40P36534 YOR309CYOR309C 381 nt-2.05□□□□□ -2.74
MRPL40P36534 YBL100W-CYBL100W-C 120 nt-2.08□□□□□ -2.74
MRPL40P36534 YNL337WYNL337W 255 nt-2.16□□□□□ -2.76
MRPL40P36534 YBR126W-BYBR126W-B 144 nt-2.18□□□□□ -2.76
MRPL40P36534 snR6snR6 112 nt-2.25□□□□□ -2.77
MRPL40P36534 tS(GCU)Q1tS(GCU)Q1 86 nt-2.28□□□□□ -2.77
MRPL40P36534 YKL225WYKL225W 348 nt-2.29□□□□□ -2.78
MRPL40P36534 YOR335W-AYOR335W-A 81 nt-2.34□□□□□ -2.78
MRPL40P36534 Q0032Q0032 291 nt-2.41□□□□□ -2.8
MRPL40P36534 YDL114W-AYDL114W-A 114 nt-2.41□□□□□ -2.8
MRPL40P36534 snR73snR73 106 nt-2.42□□□□□ -2.8
MRPL40P36534 RPL41BYDL133C-A 78 nt-2.43□□□□□ -2.8
MRPL40P36534 YGL041C-BYGL041C-B 183 nt-2.43□□□□□ -2.8
MRPL40P36534 tV(UAC)QtV(UAC)Q 76 nt-2.43□□□□□ -2.8
MRPL40P36534 snR61snR61 90 nt-2.52□□□□□ -2.81
MRPL40P36534 YGL007C-AYGL007C-A 87 nt-2.52□□□□□ -2.81
MRPL40P36534 YNL103W-AYNL103W-A 90 nt-2.52□□□□□ -2.81
MRPL40P36534 YDR034C-AYDR034C-A 177 nt-2.53□□□□□ -2.81
Retrieved 100 of 7,029 protein–RNA pairs in 30.7 ms