Protein–RNA interactions for Protein: P36062

AVT3, Vacuolar amino acid transporter 3, yeastyeast

Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AVT3P36062 CDC39YCR093W 6327 nt2.58□□□□□ -2
AVT3P36062 YER090C-AYER090C-A 90 nt2.56□□□□□ -2
AVT3P36062 CFT1YDR301W 4074 nt2.54□□□□□ -2
AVT3P36062 MLP2YIL149C 5040 nt2.53□□□□□ -2
AVT3P36062 YDL114W-AYDL114W-A 114 nt2.52□□□□□ -2.01
AVT3P36062 YGR130CYGR130C 2451 nt2.49□□□□□ -2.01
AVT3P36062 tV(UAC)QtV(UAC)Q 76 nt2.48□□□□□ -2.01
AVT3P36062 DGR1YNL130C-A 147 nt2.48□□□□□ -2.01
AVT3P36062 LAA1YJL207C 6045 nt2.48□□□□□ -2.01
AVT3P36062 YOR093CYOR093C 4947 nt2.46□□□□□ -2.02
AVT3P36062 tT(UGU)HtT(UGU)H 72 nt2.38□□□□□ -2.03
AVT3P36062 snR67snR67 82 nt2.36□□□□□ -2.03
AVT3P36062 NUP192YJL039C 5052 nt2.36□□□□□ -2.03
AVT3P36062 SPT7YBR081C 3999 nt2.35□□□□□ -2.03
AVT3P36062 YNL284C-BYNL284C-B 5268 nt2.33□□□□□ -2.04
AVT3P36062 BRR2YER172C 6492 nt2.31□□□□□ -2.04
AVT3P36062 FKS1YLR342W 5631 nt2.29□□□□□ -2.04
AVT3P36062 YHR214C-BYHR214C-B 5382 nt2.29□□□□□ -2.04
AVT3P36062 YMR160WYMR160W 2451 nt2.28□□□□□ -2.04
AVT3P36062 PEP1YBL017C 4740 nt2.25□□□□□ -2.05
AVT3P36062 SSK2YNR031C 4740 nt2.25□□□□□ -2.05
AVT3P36062 FAB1YFR019W 6837 nt2.23□□□□□ -2.05
AVT3P36062 DNF3YMR162C 4971 nt2.22□□□□□ -2.05
AVT3P36062 VPS15YBR097W 4365 nt2.22□□□□□ -2.05
AVT3P36062 YKL106C-AYKL106C-A 120 nt2.18□□□□□ -2.06
AVT3P36062 FIG2YCR089W 4830 nt2.17□□□□□ -2.06
AVT3P36062 IRA1YBR140C 9279 nt2.16□□□□□ -2.06
AVT3P36062 VAM6YDL077C 3150 nt2.12□□□□□ -2.07
AVT3P36062 YNL054W-BYNL054W-B 5250 nt2.11□□□□□ -2.07
AVT3P36062 MEC1YBR136W 7107 nt2.08□□□□□ -2.08
AVT3P36062 YOR192C-BYOR192C-B 5313 nt2.06□□□□□ -2.08
AVT3P36062 YMR272W-BYMR272W-B 108 nt2.02□□□□□ -2.09
AVT3P36062 LTE1YAL024C 4308 nt2.01□□□□□ -2.09
AVT3P36062 RKR1YMR247C 4689 nt1.93□□□□□ -2.1
AVT3P36062 SCC2YDR180W 4482 nt1.93□□□□□ -2.1
AVT3P36062 YPR117WYPR117W 7470 nt1.92□□□□□ -2.1
AVT3P36062 snR77snR77 88 nt1.9□□□□□ -2.11
AVT3P36062 tQ(UUG)E2tQ(UUG)E2 72 nt1.88□□□□□ -2.11
AVT3P36062 CCH1YGR217W 6120 nt1.88□□□□□ -2.11
AVT3P36062 SOV1YMR066W 2697 nt1.87□□□□□ -2.11
AVT3P36062 YOR316C-AYOR316C-A 210 nt1.79□□□□□ -2.12
AVT3P36062 PAU24YBR301W 363 nt1.77□□□□□ -2.13
AVT3P36062 HKR1YDR420W 5409 nt1.73□□□□□ -2.13
AVT3P36062 MLP1YKR095W 5628 nt1.72□□□□□ -2.13
AVT3P36062 SBH2YER019C-A 267 nt1.69□□□□□ -2.14
AVT3P36062 BEM2YER155C 6504 nt1.68□□□□□ -2.14
AVT3P36062 YBL100W-BYBL100W-B 5313 nt1.68□□□□□ -2.14
AVT3P36062 tC(GCA)QtC(GCA)Q 76 nt1.61□□□□□ -2.15
AVT3P36062 BUD3YCL014W 4911 nt1.58□□□□□ -2.16
AVT3P36062 tH(GUG)E1tH(GUG)E1 72 nt1.57□□□□□ -2.16
AVT3P36062 tH(GUG)E2tH(GUG)E2 72 nt1.57□□□□□ -2.16
AVT3P36062 tH(GUG)G1tH(GUG)G1 72 nt1.57□□□□□ -2.16
AVT3P36062 tH(GUG)G2tH(GUG)G2 72 nt1.57□□□□□ -2.16
AVT3P36062 tH(GUG)HtH(GUG)H 72 nt1.57□□□□□ -2.16
AVT3P36062 tH(GUG)KtH(GUG)K 72 nt1.57□□□□□ -2.16
AVT3P36062 tH(GUG)MtH(GUG)M 72 nt1.57□□□□□ -2.16
AVT3P36062 YJR029WYJR029W 5268 nt1.56□□□□□ -2.16
AVT3P36062 MYO1YHR023W 5787 nt1.54□□□□□ -2.16
AVT3P36062 DOP1YDR141C 5097 nt1.54□□□□□ -2.16
AVT3P36062 YOR186C-AYOR186C-A 210 nt1.53□□□□□ -2.16
AVT3P36062 tV(UAC)BtV(UAC)B 74 nt1.52□□□□□ -2.17
AVT3P36062 tV(UAC)DtV(UAC)D 74 nt1.52□□□□□ -2.17
AVT3P36062 IML1YJR138W 4755 nt1.48□□□□□ -2.17
AVT3P36062 YML100W-AYML100W-A 174 nt1.47□□□□□ -2.17
AVT3P36062 YPR137C-BYPR137C-B 5268 nt1.46□□□□□ -2.18
AVT3P36062 YOL014WYOL014W 375 nt1.41□□□□□ -2.18
AVT3P36062 YJL113WYJL113W 4647 nt1.41□□□□□ -2.18
AVT3P36062 RPL41BYDL133C-A 78 nt1.4□□□□□ -2.19
AVT3P36062 tF(GAA)BtF(GAA)B 73 nt1.4□□□□□ -2.19
AVT3P36062 tF(GAA)FtF(GAA)F 73 nt1.4□□□□□ -2.19
AVT3P36062 tF(GAA)GtF(GAA)G 73 nt1.4□□□□□ -2.19
AVT3P36062 tF(GAA)H1tF(GAA)H1 73 nt1.4□□□□□ -2.19
AVT3P36062 tF(GAA)H2tF(GAA)H2 73 nt1.4□□□□□ -2.19
AVT3P36062 tF(GAA)MtF(GAA)M 73 nt1.4□□□□□ -2.19
AVT3P36062 tF(GAA)P1tF(GAA)P1 73 nt1.4□□□□□ -2.19
AVT3P36062 tF(GAA)P2tF(GAA)P2 73 nt1.4□□□□□ -2.19
AVT3P36062 IQG1YPL242C 4488 nt1.37□□□□□ -2.19
AVT3P36062 YKL145W-AYKL145W-A 93 nt1.26□□□□□ -2.21
AVT3P36062 EMT1tM(CAU)D 73 nt1.23□□□□□ -2.21
AVT3P36062 EMT5tM(CAU)J1 73 nt1.23□□□□□ -2.21
AVT3P36062 EMT3tM(CAU)J2 73 nt1.23□□□□□ -2.21
AVT3P36062 EMT4tM(CAU)M 73 nt1.23□□□□□ -2.21
AVT3P36062 EMT2tM(CAU)O2 73 nt1.23□□□□□ -2.21
AVT3P36062 ESP1YGR098C 4893 nt1.22□□□□□ -2.21
AVT3P36062 snR58snR58 96 nt1.21□□□□□ -2.22
AVT3P36062 YOR335W-AYOR335W-A 81 nt1.21□□□□□ -2.22
AVT3P36062 UTP20YBL004W 7482 nt1.19□□□□□ -2.22
AVT3P36062 YPR159C-AYPR159C-A 102 nt1.18□□□□□ -2.22
AVT3P36062 FMP27YLR454W 7887 nt1.16□□□□□ -2.22
AVT3P36062 snR6snR6 112 nt1.14□□□□□ -2.23
AVT3P36062 PAU9YBL108C-A 129 nt1.06□□□□□ -2.24
AVT3P36062 THO2YNL139C 4794 nt1.04□□□□□ -2.24
AVT3P36062 UTP10YJL109C 5310 nt0.98□□□□□ -2.25
AVT3P36062 snR73snR73 106 nt0.97□□□□□ -2.25
AVT3P36062 snR128snR128 126 nt0.95□□□□□ -2.26
AVT3P36062 YMR272W-AYMR272W-A 114 nt0.91□□□□□ -2.26
AVT3P36062 snR161snR161 161 nt0.79□□□□□ -2.28
AVT3P36062 tT(AGU)BtT(AGU)B 73 nt0.75□□□□□ -2.29
AVT3P36062 tT(AGU)CtT(AGU)C 73 nt0.75□□□□□ -2.29
AVT3P36062 tT(AGU)DtT(AGU)D 73 nt0.75□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms