Protein–RNA interactions for Protein: P35995

YKL222C, Uncharacterized transcriptional regulatory protein YKL222C, yeastyeast

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKL222CP35995 NST1YNL091W 3723 nt1.61□□□□□ -2.15
YKL222CP35995 ULP2YIL031W 3105 nt1.6□□□□□ -2.15
YKL222CP35995 YHR180C-BYHR180C-B 105 nt1.6□□□□□ -2.15
YKL222CP35995 YPR160W-AYPR160W-A 81 nt1.6□□□□□ -2.15
YKL222CP35995 SWI4YER111C 3282 nt1.6□□□□□ -2.15
YKL222CP35995 NUP145YGL092W 3954 nt1.59□□□□□ -2.15
YKL222CP35995 TRM732YMR259C 4263 nt1.59□□□□□ -2.15
YKL222CP35995 FYV8YGR196C 2454 nt1.59□□□□□ -2.16
YKL222CP35995 BEM3YPL115C 3387 nt1.58□□□□□ -2.16
YKL222CP35995 tN(GUU)QtN(GUU)Q 71 nt1.58□□□□□ -2.16
YKL222CP35995 IRA1YBR140C 9279 nt1.58□□□□□ -2.16
YKL222CP35995 snR69snR69 101 nt1.57□□□□□ -2.16
YKL222CP35995 tF(GAA)BtF(GAA)B 73 nt1.57□□□□□ -2.16
YKL222CP35995 tF(GAA)FtF(GAA)F 73 nt1.57□□□□□ -2.16
YKL222CP35995 tF(GAA)GtF(GAA)G 73 nt1.57□□□□□ -2.16
YKL222CP35995 tF(GAA)H1tF(GAA)H1 73 nt1.57□□□□□ -2.16
YKL222CP35995 tF(GAA)H2tF(GAA)H2 73 nt1.57□□□□□ -2.16
YKL222CP35995 tF(GAA)MtF(GAA)M 73 nt1.57□□□□□ -2.16
YKL222CP35995 tF(GAA)P1tF(GAA)P1 73 nt1.57□□□□□ -2.16
YKL222CP35995 tF(GAA)P2tF(GAA)P2 73 nt1.57□□□□□ -2.16
YKL222CP35995 CDC25YLR310C 4770 nt1.56□□□□□ -2.16
YKL222CP35995 SPC110YDR356W 2835 nt1.56□□□□□ -2.16
YKL222CP35995 STO1YMR125W 2586 nt1.56□□□□□ -2.16
YKL222CP35995 PET111YMR257C 2403 nt1.56□□□□□ -2.16
YKL222CP35995 UTP20YBL004W 7482 nt1.53□□□□□ -2.16
YKL222CP35995 SIP4YJL089W 2490 nt1.52□□□□□ -2.17
YKL222CP35995 GEA2YEL022W 4380 nt1.52□□□□□ -2.17
YKL222CP35995 CSE1YGL238W 2883 nt1.52□□□□□ -2.17
YKL222CP35995 YNL054W-BYNL054W-B 5250 nt1.51□□□□□ -2.17
YKL222CP35995 RDS3YPR094W 324 nt1.51□□□□□ -2.17
YKL222CP35995 tQ(UUG)E2tQ(UUG)E2 72 nt1.5□□□□□ -2.17
YKL222CP35995 MYO1YHR023W 5787 nt1.5□□□□□ -2.17
YKL222CP35995 APL3YBL037W 3078 nt1.48□□□□□ -2.17
YKL222CP35995 SEC8YPR055W 3198 nt1.47□□□□□ -2.17
YKL222CP35995 BUL2YML111W 2763 nt1.46□□□□□ -2.18
YKL222CP35995 PRP16YKR086W 3216 nt1.46□□□□□ -2.18
YKL222CP35995 YSP1YHR155W 3687 nt1.45□□□□□ -2.18
YKL222CP35995 NUP188YML103C 4968 nt1.44□□□□□ -2.18
YKL222CP35995 DOP1YDR141C 5097 nt1.42□□□□□ -2.18
YKL222CP35995 YLR399W-AYLR399W-A 105 nt1.41□□□□□ -2.18
YKL222CP35995 HKR1YDR420W 5409 nt1.39□□□□□ -2.19
YKL222CP35995 BUD3YCL014W 4911 nt1.37□□□□□ -2.19
YKL222CP35995 YOL014WYOL014W 375 nt1.36□□□□□ -2.19
YKL222CP35995 CDC39YCR093W 6327 nt1.36□□□□□ -2.19
YKL222CP35995 YOR376W-AYOR376W-A 156 nt1.34□□□□□ -2.19
YKL222CP35995 YJL077W-AYJL077W-A 87 nt1.33□□□□□ -2.2
YKL222CP35995 tQ(UUG)QtQ(UUG)Q 76 nt1.31□□□□□ -2.2
YKL222CP35995 SPT7YBR081C 3999 nt1.3□□□□□ -2.2
YKL222CP35995 YER090C-AYER090C-A 90 nt1.28□□□□□ -2.2
YKL222CP35995 YLL006W-AYLL006W-A 177 nt1.28□□□□□ -2.2
YKL222CP35995 tV(UAC)QtV(UAC)Q 76 nt1.26□□□□□ -2.21
YKL222CP35995 YPR117WYPR117W 7470 nt1.24□□□□□ -2.21
YKL222CP35995 YDL114W-AYDL114W-A 114 nt1.23□□□□□ -2.21
YKL222CP35995 YMR160WYMR160W 2451 nt1.2□□□□□ -2.22
YKL222CP35995 SCC2YDR180W 4482 nt1.18□□□□□ -2.22
YKL222CP35995 snR40snR40 97 nt1.16□□□□□ -2.22
YKL222CP35995 snR67snR67 82 nt1.13□□□□□ -2.23
YKL222CP35995 YJR029WYJR029W 5268 nt1.13□□□□□ -2.23
YKL222CP35995 YPR137C-BYPR137C-B 5268 nt1.13□□□□□ -2.23
YKL222CP35995 VAM6YDL077C 3150 nt1.13□□□□□ -2.23
YKL222CP35995 YKL145W-AYKL145W-A 93 nt1.12□□□□□ -2.23
YKL222CP35995 LTE1YAL024C 4308 nt1.11□□□□□ -2.23
YKL222CP35995 YKL106C-AYKL106C-A 120 nt1.11□□□□□ -2.23
YKL222CP35995 YOR192C-BYOR192C-B 5313 nt1.08□□□□□ -2.24
YKL222CP35995 RKR1YMR247C 4689 nt1.05□□□□□ -2.24
YKL222CP35995 BEM2YER155C 6504 nt1.03□□□□□ -2.24
YKL222CP35995 EMT1tM(CAU)D 73 nt1.02□□□□□ -2.25
YKL222CP35995 EMT5tM(CAU)J1 73 nt1.02□□□□□ -2.25
YKL222CP35995 EMT3tM(CAU)J2 73 nt1.02□□□□□ -2.25
YKL222CP35995 EMT4tM(CAU)M 73 nt1.02□□□□□ -2.25
YKL222CP35995 EMT2tM(CAU)O2 73 nt1.02□□□□□ -2.25
YKL222CP35995 YBL100W-BYBL100W-B 5313 nt0.93□□□□□ -2.26
YKL222CP35995 tT(AGU)BtT(AGU)B 73 nt0.93□□□□□ -2.26
YKL222CP35995 tT(AGU)CtT(AGU)C 73 nt0.93□□□□□ -2.26
YKL222CP35995 tT(AGU)DtT(AGU)D 73 nt0.93□□□□□ -2.26
YKL222CP35995 tT(AGU)HtT(AGU)H 73 nt0.93□□□□□ -2.26
YKL222CP35995 tT(AGU)I1tT(AGU)I1 73 nt0.93□□□□□ -2.26
YKL222CP35995 tT(AGU)I2tT(AGU)I2 73 nt0.93□□□□□ -2.26
YKL222CP35995 tT(AGU)JtT(AGU)J 73 nt0.93□□□□□ -2.26
YKL222CP35995 tT(AGU)N1tT(AGU)N1 73 nt0.93□□□□□ -2.26
YKL222CP35995 tT(AGU)N2tT(AGU)N2 73 nt0.93□□□□□ -2.26
YKL222CP35995 tT(AGU)O1tT(AGU)O1 73 nt0.93□□□□□ -2.26
YKL222CP35995 tT(AGU)O2tT(AGU)O2 73 nt0.93□□□□□ -2.26
YKL222CP35995 MLP2YIL149C 5040 nt0.91□□□□□ -2.26
YKL222CP35995 SOV1YMR066W 2697 nt0.91□□□□□ -2.26
YKL222CP35995 snR77snR77 88 nt0.89□□□□□ -2.27
YKL222CP35995 YOR316C-AYOR316C-A 210 nt0.86□□□□□ -2.27
YKL222CP35995 FMP27YLR454W 7887 nt0.84□□□□□ -2.27
YKL222CP35995 IQG1YPL242C 4488 nt0.83□□□□□ -2.28
YKL222CP35995 THO2YNL139C 4794 nt0.83□□□□□ -2.28
YKL222CP35995 YPR159C-AYPR159C-A 102 nt0.83□□□□□ -2.28
YKL222CP35995 MLP1YKR095W 5628 nt0.81□□□□□ -2.28
YKL222CP35995 YML100W-AYML100W-A 174 nt0.78□□□□□ -2.28
YKL222CP35995 SBH2YER019C-A 267 nt0.76□□□□□ -2.29
YKL222CP35995 ESP1YGR098C 4893 nt0.67□□□□□ -2.3
YKL222CP35995 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
YKL222CP35995 UTP10YJL109C 5310 nt0.58□□□□□ -2.32
YKL222CP35995 YOR186C-AYOR186C-A 210 nt0.56□□□□□ -2.32
YKL222CP35995 YJL113WYJL113W 4647 nt0.52□□□□□ -2.33
YKL222CP35995 PAU9YBL108C-A 129 nt0.47□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 7.5 ms