Protein–RNA interactions for Protein: P35210

SPT23, Protein SPT23, yeastyeast

Predictions only

Length 1,082 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT23P35210 NUP192YJL039C 5052 nt1.92□□□□□ -2.1
SPT23P35210 SPP41YDR464W 4308 nt1.91□□□□□ -2.1
SPT23P35210 YKL106C-AYKL106C-A 120 nt1.9□□□□□ -2.11
SPT23P35210 NUP145YGL092W 3954 nt1.89□□□□□ -2.11
SPT23P35210 MYO1YHR023W 5787 nt1.89□□□□□ -2.11
SPT23P35210 snR67snR67 82 nt1.88□□□□□ -2.11
SPT23P35210 FKS1YLR342W 5631 nt1.87□□□□□ -2.11
SPT23P35210 NUP188YML103C 4968 nt1.86□□□□□ -2.11
SPT23P35210 YOR093CYOR093C 4947 nt1.86□□□□□ -2.11
SPT23P35210 LAA1YJL207C 6045 nt1.86□□□□□ -2.11
SPT23P35210 CDC39YCR093W 6327 nt1.85□□□□□ -2.11
SPT23P35210 YMR272W-BYMR272W-B 108 nt1.85□□□□□ -2.11
SPT23P35210 CLU1YMR012W 3834 nt1.84□□□□□ -2.11
SPT23P35210 NEO1YIL048W 3456 nt1.83□□□□□ -2.12
SPT23P35210 TMA7YLR262C-A 195 nt1.83□□□□□ -2.12
SPT23P35210 YMR160WYMR160W 2451 nt1.79□□□□□ -2.12
SPT23P35210 DNF3YMR162C 4971 nt1.76□□□□□ -2.13
SPT23P35210 CFT1YDR301W 4074 nt1.71□□□□□ -2.14
SPT23P35210 YGR130CYGR130C 2451 nt1.69□□□□□ -2.14
SPT23P35210 YNL284C-BYNL284C-B 5268 nt1.68□□□□□ -2.14
SPT23P35210 BST1YFL025C 3090 nt1.67□□□□□ -2.14
SPT23P35210 FIG2YCR089W 4830 nt1.65□□□□□ -2.14
SPT23P35210 VAM6YDL077C 3150 nt1.65□□□□□ -2.15
SPT23P35210 VPS15YBR097W 4365 nt1.62□□□□□ -2.15
SPT23P35210 SSK2YNR031C 4740 nt1.61□□□□□ -2.15
SPT23P35210 YMR247W-AYMR247W-A 144 nt1.6□□□□□ -2.15
SPT23P35210 SPT7YBR081C 3999 nt1.59□□□□□ -2.15
SPT23P35210 tT(UGU)HtT(UGU)H 72 nt1.59□□□□□ -2.15
SPT23P35210 BRR2YER172C 6492 nt1.59□□□□□ -2.16
SPT23P35210 YPR117WYPR117W 7470 nt1.58□□□□□ -2.16
SPT23P35210 MLP2YIL149C 5040 nt1.58□□□□□ -2.16
SPT23P35210 snR77snR77 88 nt1.57□□□□□ -2.16
SPT23P35210 YOR192C-BYOR192C-B 5313 nt1.56□□□□□ -2.16
SPT23P35210 CCH1YGR217W 6120 nt1.53□□□□□ -2.16
SPT23P35210 MEC1YBR136W 7107 nt1.52□□□□□ -2.17
SPT23P35210 BUD3YCL014W 4911 nt1.51□□□□□ -2.17
SPT23P35210 YOR316C-AYOR316C-A 210 nt1.48□□□□□ -2.17
SPT23P35210 SOV1YMR066W 2697 nt1.48□□□□□ -2.17
SPT23P35210 RKR1YMR247C 4689 nt1.45□□□□□ -2.18
SPT23P35210 IML1YJR138W 4755 nt1.43□□□□□ -2.18
SPT23P35210 tH(GUG)E1tH(GUG)E1 72 nt1.39□□□□□ -2.19
SPT23P35210 tH(GUG)E2tH(GUG)E2 72 nt1.39□□□□□ -2.19
SPT23P35210 tH(GUG)G1tH(GUG)G1 72 nt1.39□□□□□ -2.19
SPT23P35210 SBH2YER019C-A 267 nt1.39□□□□□ -2.19
SPT23P35210 tH(GUG)G2tH(GUG)G2 72 nt1.39□□□□□ -2.19
SPT23P35210 tH(GUG)HtH(GUG)H 72 nt1.39□□□□□ -2.19
SPT23P35210 tH(GUG)KtH(GUG)K 72 nt1.39□□□□□ -2.19
SPT23P35210 tH(GUG)MtH(GUG)M 72 nt1.39□□□□□ -2.19
SPT23P35210 IRA1YBR140C 9279 nt1.38□□□□□ -2.19
SPT23P35210 PAU24YBR301W 363 nt1.37□□□□□ -2.19
SPT23P35210 HKR1YDR420W 5409 nt1.35□□□□□ -2.19
SPT23P35210 tQ(UUG)E2tQ(UUG)E2 72 nt1.32□□□□□ -2.2
SPT23P35210 YBL100W-BYBL100W-B 5313 nt1.3□□□□□ -2.2
SPT23P35210 tV(UAC)BtV(UAC)B 74 nt1.3□□□□□ -2.2
SPT23P35210 tV(UAC)DtV(UAC)D 74 nt1.3□□□□□ -2.2
SPT23P35210 LTE1YAL024C 4308 nt1.26□□□□□ -2.21
SPT23P35210 YML100W-AYML100W-A 174 nt1.22□□□□□ -2.21
SPT23P35210 THO2YNL139C 4794 nt1.16□□□□□ -2.22
SPT23P35210 tF(GAA)BtF(GAA)B 73 nt1.15□□□□□ -2.23
SPT23P35210 tF(GAA)FtF(GAA)F 73 nt1.15□□□□□ -2.23
SPT23P35210 tF(GAA)GtF(GAA)G 73 nt1.15□□□□□ -2.23
SPT23P35210 tF(GAA)H1tF(GAA)H1 73 nt1.15□□□□□ -2.23
SPT23P35210 tF(GAA)H2tF(GAA)H2 73 nt1.15□□□□□ -2.23
SPT23P35210 tF(GAA)MtF(GAA)M 73 nt1.15□□□□□ -2.23
SPT23P35210 tF(GAA)P1tF(GAA)P1 73 nt1.15□□□□□ -2.23
SPT23P35210 tF(GAA)P2tF(GAA)P2 73 nt1.15□□□□□ -2.23
SPT23P35210 SCC2YDR180W 4482 nt1.15□□□□□ -2.23
SPT23P35210 UTP20YBL004W 7482 nt1.09□□□□□ -2.24
SPT23P35210 tC(GCA)QtC(GCA)Q 76 nt1.03□□□□□ -2.24
SPT23P35210 ESP1YGR098C 4893 nt1.02□□□□□ -2.25
SPT23P35210 DOP1YDR141C 5097 nt1.02□□□□□ -2.25
SPT23P35210 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
SPT23P35210 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
SPT23P35210 YOR186C-AYOR186C-A 210 nt0.97□□□□□ -2.25
SPT23P35210 YOL014WYOL014W 375 nt0.96□□□□□ -2.26
SPT23P35210 MLP1YKR095W 5628 nt0.95□□□□□ -2.26
SPT23P35210 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
SPT23P35210 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
SPT23P35210 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
SPT23P35210 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
SPT23P35210 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
SPT23P35210 BEM2YER155C 6504 nt0.92□□□□□ -2.26
SPT23P35210 YKL145W-AYKL145W-A 93 nt0.88□□□□□ -2.27
SPT23P35210 PAU9YBL108C-A 129 nt0.88□□□□□ -2.27
SPT23P35210 YOR335W-AYOR335W-A 81 nt0.88□□□□□ -2.27
SPT23P35210 FMP27YLR454W 7887 nt0.88□□□□□ -2.27
SPT23P35210 IQG1YPL242C 4488 nt0.87□□□□□ -2.27
SPT23P35210 RPL41BYDL133C-A 78 nt0.86□□□□□ -2.27
SPT23P35210 YJL113WYJL113W 4647 nt0.86□□□□□ -2.27
SPT23P35210 snR6snR6 112 nt0.8□□□□□ -2.28
SPT23P35210 YMR272W-AYMR272W-A 114 nt0.75□□□□□ -2.29
SPT23P35210 tT(AGU)BtT(AGU)B 73 nt0.74□□□□□ -2.29
SPT23P35210 tT(AGU)CtT(AGU)C 73 nt0.74□□□□□ -2.29
SPT23P35210 tT(AGU)DtT(AGU)D 73 nt0.74□□□□□ -2.29
SPT23P35210 tT(AGU)HtT(AGU)H 73 nt0.74□□□□□ -2.29
SPT23P35210 tT(AGU)I1tT(AGU)I1 73 nt0.74□□□□□ -2.29
SPT23P35210 tT(AGU)I2tT(AGU)I2 73 nt0.74□□□□□ -2.29
SPT23P35210 tT(AGU)JtT(AGU)J 73 nt0.74□□□□□ -2.29
SPT23P35210 tT(AGU)N1tT(AGU)N1 73 nt0.74□□□□□ -2.29
SPT23P35210 tT(AGU)N2tT(AGU)N2 73 nt0.74□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms