Protein–RNA interactions for Protein: P33442

RPS1A, 40S ribosomal protein S1-A, yeastyeast

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS1AP33442 tD(GUC)QtD(GUC)Q 75 nt-1.81□□□□□ -2.7
RPS1AP33442 YNL205CYNL205C 423 nt-1.81□□□□□ -2.7
RPS1AP33442 YGR240C-AYGR240C-A 201 nt-1.82□□□□□ -2.7
RPS1AP33442 YLR286W-AYLR286W-A 135 nt-1.82□□□□□ -2.7
RPS1AP33442 snR77snR77 88 nt-1.85□□□□□ -2.71
RPS1AP33442 YEL014CYEL014C 306 nt-1.85□□□□□ -2.71
RPS1AP33442 YBR182C-AYBR182C-A 195 nt-1.89□□□□□ -2.71
RPS1AP33442 YOR293C-AYOR293C-A 150 nt-1.9□□□□□ -2.71
RPS1AP33442 YBR178WYBR178W 375 nt-1.9□□□□□ -2.71
RPS1AP33442 snR81snR81 201 nt-1.91□□□□□ -2.72
RPS1AP33442 YDL159C-BYDL159C-B 177 nt-1.91□□□□□ -2.72
RPS1AP33442 YDR183C-AYDR183C-A 258 nt-1.91□□□□□ -2.72
RPS1AP33442 YMR315W-AYMR315W-A 108 nt-1.94□□□□□ -2.72
RPS1AP33442 YOR329W-AYOR329W-A 210 nt-1.95□□□□□ -2.72
RPS1AP33442 YAL016C-BYAL016C-B 186 nt-2□□□□□ -2.73
RPS1AP33442 YBR131C-AYBR131C-A 90 nt-2.01□□□□□ -2.73
RPS1AP33442 YJR157WYJR157W 363 nt-2.02□□□□□ -2.73
RPS1AP33442 tF(GAA)QtF(GAA)Q 75 nt-2.08□□□□□ -2.74
RPS1AP33442 YPL038W-AYPL038W-A 192 nt-2.08□□□□□ -2.74
RPS1AP33442 YER181CYER181C 324 nt-2.11□□□□□ -2.75
RPS1AP33442 YPR197CYPR197C 564 nt-2.12□□□□□ -2.75
RPS1AP33442 YLR299C-AYLR299C-A 93 nt-2.13□□□□□ -2.75
RPS1AP33442 YBR126W-BYBR126W-B 144 nt-2.13□□□□□ -2.75
RPS1AP33442 YLR222C-AYLR222C-A 231 nt-2.15□□□□□ -2.75
RPS1AP33442 YOR376W-AYOR376W-A 156 nt-2.15□□□□□ -2.75
RPS1AP33442 YBR196C-AYBR196C-A 150 nt-2.16□□□□□ -2.76
RPS1AP33442 RPL39YJL189W 156 nt-2.2□□□□□ -2.76
RPS1AP33442 YDR413CYDR413C 576 nt-2.21□□□□□ -2.76
RPS1AP33442 YOR102WYOR102W 351 nt-2.23□□□□□ -2.77
RPS1AP33442 snR55snR55 98 nt-2.25□□□□□ -2.77
RPS1AP33442 YNL097C-BYNL097C-B 123 nt-2.26□□□□□ -2.77
RPS1AP33442 YGL188C-AYGL188C-A 141 nt-2.27□□□□□ -2.77
RPS1AP33442 snR48snR48 113 nt-2.27□□□□□ -2.77
RPS1AP33442 YNL277W-AYNL277W-A 189 nt-2.28□□□□□ -2.77
RPS1AP33442 YOR309CYOR309C 381 nt-2.28□□□□□ -2.77
RPS1AP33442 YDR157WYDR157W 402 nt-2.29□□□□□ -2.78
RPS1AP33442 tL(UAA)QtL(UAA)Q 85 nt-2.33□□□□□ -2.78
RPS1AP33442 YKL118WYKL118W 312 nt-2.33□□□□□ -2.78
RPS1AP33442 YHR180C-BYHR180C-B 105 nt-2.34□□□□□ -2.78
RPS1AP33442 YOR316C-AYOR316C-A 210 nt-2.36□□□□□ -2.79
RPS1AP33442 YDL240C-AYDL240C-A 138 nt-2.37□□□□□ -2.79
RPS1AP33442 YLR342W-AYLR342W-A 174 nt-2.39□□□□□ -2.79
RPS1AP33442 YKL106C-AYKL106C-A 120 nt-2.43□□□□□ -2.8
RPS1AP33442 YPR012WYPR012W 255 nt-2.46□□□□□ -2.8
RPS1AP33442 YOR302WYOR302W 78 nt-2.47□□□□□ -2.8
RPS1AP33442 YOL155W-AYOL155W-A 135 nt-2.48□□□□□ -2.81
RPS1AP33442 Q0017Q0017 162 nt-2.49□□□□□ -2.81
RPS1AP33442 GIM4YEL003W 336 nt-2.5□□□□□ -2.81
RPS1AP33442 snR52snR52 92 nt-2.5□□□□□ -2.81
RPS1AP33442 YHL015W-AYHL015W-A 84 nt-2.51□□□□□ -2.81
RPS1AP33442 YJL150WYJL150W 303 nt-2.54□□□□□ -2.82
RPS1AP33442 YDR118W-AYDR118W-A 117 nt-2.58□□□□□ -2.82
RPS1AP33442 YDR524W-CYDR524W-C 90 nt-2.59□□□□□ -2.82
RPS1AP33442 YDR543CYDR543C 300 nt-2.64□□□□□ -2.83
RPS1AP33442 YBR109W-AYBR109W-A 225 nt-2.65□□□□□ -2.83
RPS1AP33442 YNL198CYNL198C 303 nt-2.68□□□□□ -2.84
RPS1AP33442 YPL152W-AYPL152W-A 99 nt-2.7□□□□□ -2.84
RPS1AP33442 YOL083C-AYOL083C-A 141 nt-2.72□□□□□ -2.84
RPS1AP33442 YBR296C-AYBR296C-A 120 nt-2.73□□□□□ -2.85
RPS1AP33442 snR56snR56 88 nt-2.74□□□□□ -2.85
RPS1AP33442 RPL41AYDL184C 78 nt-2.74□□□□□ -2.85
RPS1AP33442 snR6snR6 112 nt-2.75□□□□□ -2.85
RPS1AP33442 VAR1Q0140 1197 nt-2.76□□□□□ -2.85
RPS1AP33442 SOM1YEL059C-A 225 nt-2.78□□□□□ -2.85
RPS1AP33442 snR65snR65 100 nt-2.79□□□□□ -2.86
RPS1AP33442 snR38snR38 95 nt-2.86□□□□□ -2.87
RPS1AP33442 snR80snR80 171 nt-2.87□□□□□ -2.87
RPS1AP33442 YOR335W-AYOR335W-A 81 nt-2.88□□□□□ -2.87
RPS1AP33442 snR73snR73 106 nt-2.9□□□□□ -2.87
RPS1AP33442 YCR095W-AYCR095W-A 159 nt-2.94□□□□□ -2.88
RPS1AP33442 RPL41BYDL133C-A 78 nt-2.94□□□□□ -2.88
RPS1AP33442 YBL053WYBL053W 375 nt-2.97□□□□□ -2.88
RPS1AP33442 YBL071C-BYBL071C-B 99 nt-3.04□□□□□ -2.9
RPS1AP33442 YGR151CYGR151C 336 nt-3.05□□□□□ -2.9
RPS1AP33442 YOL166W-AYOL166W-A 156 nt-3.05□□□□□ -2.9
RPS1AP33442 YDR406W-AYDR406W-A 246 nt-3.06□□□□□ -2.9
RPS1AP33442 YOL164W-AYOL164W-A 183 nt-3.07□□□□□ -2.9
RPS1AP33442 Q0142Q0142 177 nt-3.08□□□□□ -2.9
RPS1AP33442 snR47snR47 99 nt-3.14□□□□□ -2.91
RPS1AP33442 YOR231C-AYOR231C-A 201 nt-3.2□□□□□ -2.92
RPS1AP33442 YDR524C-AYDR524C-A 120 nt-3.24□□□□□ -2.93
RPS1AP33442 YBL100W-CYBL100W-C 120 nt-3.27□□□□□ -2.93
RPS1AP33442 YDL114W-AYDL114W-A 114 nt-3.28□□□□□ -2.93
RPS1AP33442 YAL037C-AYAL037C-A 93 nt-3.28□□□□□ -2.93
RPS1AP33442 tV(UAC)QtV(UAC)Q 76 nt-3.29□□□□□ -2.94
RPS1AP33442 snR85snR85 171 nt-3.31□□□□□ -2.94
RPS1AP33442 YHR175W-AYHR175W-A 150 nt-3.31□□□□□ -2.94
RPS1AP33442 YKL225WYKL225W 348 nt-3.38□□□□□ -2.95
RPS1AP33442 SPG3YDR504C 384 nt-3.45□□□□□ -2.96
RPS1AP33442 tS(GCU)Q1tS(GCU)Q1 86 nt-3.45□□□□□ -2.96
RPS1AP33442 YCL001W-BYCL001W-B 255 nt-3.47□□□□□ -2.96
RPS1AP33442 tR(ACG)Q2tR(ACG)Q2 74 nt-3.48□□□□□ -2.97
RPS1AP33442 Q0144Q0144 330 nt-3.63□□□□□ -2.99
RPS1AP33442 YMR046W-AYMR046W-A 129 nt-3.65□□□□□ -2.99
RPS1AP33442 snR87snR87 109 nt-3.66□□□□□ -3
RPS1AP33442 YJR162CYJR162C 351 nt-3.68□□□□□ -3
RPS1AP33442 YNL337WYNL337W 255 nt-3.68□□□□□ -3
RPS1AP33442 YGR122C-AYGR122C-A 129 nt-3.75□□□□□ -3.01
RPS1AP33442 YDL159W-AYDL159W-A 132 nt-3.78□□□□□ -3.01
RPS1AP33442 YKL096C-BYKL096C-B 150 nt-3.8□□□□□ -3.02
Retrieved 100 of 7,029 protein–RNA pairs in 37.5 ms