Protein–RNA interactions for Protein: P25364

HCM1, Forkhead transcription factor HCM1, yeastyeast

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCM1P25364 CDC25YLR310C 4770 nt1.33□□□□□ -2.2
HCM1P25364 tF(GAA)BtF(GAA)B 73 nt1.33□□□□□ -2.2
HCM1P25364 tF(GAA)FtF(GAA)F 73 nt1.33□□□□□ -2.2
HCM1P25364 tF(GAA)GtF(GAA)G 73 nt1.33□□□□□ -2.2
HCM1P25364 tF(GAA)H1tF(GAA)H1 73 nt1.33□□□□□ -2.2
HCM1P25364 tF(GAA)H2tF(GAA)H2 73 nt1.33□□□□□ -2.2
HCM1P25364 tF(GAA)MtF(GAA)M 73 nt1.33□□□□□ -2.2
HCM1P25364 tF(GAA)P1tF(GAA)P1 73 nt1.33□□□□□ -2.2
HCM1P25364 tF(GAA)P2tF(GAA)P2 73 nt1.33□□□□□ -2.2
HCM1P25364 snR50snR50 90 nt1.33□□□□□ -2.2
HCM1P25364 YPL060C-AYPL060C-A 3315 nt1.32□□□□□ -2.2
HCM1P25364 BST1YFL025C 3090 nt1.32□□□□□ -2.2
HCM1P25364 snR69snR69 101 nt1.32□□□□□ -2.2
HCM1P25364 YKL225WYKL225W 348 nt1.32□□□□□ -2.2
HCM1P25364 MSN5YDR335W 3675 nt1.3□□□□□ -2.2
HCM1P25364 YDL159C-BYDL159C-B 177 nt1.3□□□□□ -2.2
HCM1P25364 CSE1YGL238W 2883 nt1.29□□□□□ -2.2
HCM1P25364 DOP1YDR141C 5097 nt1.28□□□□□ -2.2
HCM1P25364 UTP20YBL004W 7482 nt1.28□□□□□ -2.2
HCM1P25364 MYO1YHR023W 5787 nt1.27□□□□□ -2.21
HCM1P25364 EST2YLR318W 2655 nt1.26□□□□□ -2.21
HCM1P25364 YBR109W-AYBR109W-A 225 nt1.26□□□□□ -2.21
HCM1P25364 SIP4YJL089W 2490 nt1.25□□□□□ -2.21
HCM1P25364 RDS3YPR094W 324 nt1.24□□□□□ -2.21
HCM1P25364 YML054C-AYML054C-A 159 nt1.23□□□□□ -2.21
HCM1P25364 NST1YNL091W 3723 nt1.23□□□□□ -2.21
HCM1P25364 snR38snR38 95 nt1.21□□□□□ -2.22
HCM1P25364 YHR180C-BYHR180C-B 105 nt1.2□□□□□ -2.22
HCM1P25364 RPL41AYDL184C 78 nt1.19□□□□□ -2.22
HCM1P25364 NIP1YMR309C 2439 nt1.19□□□□□ -2.22
HCM1P25364 YDL159W-AYDL159W-A 132 nt1.18□□□□□ -2.22
HCM1P25364 YLL006W-AYLL006W-A 177 nt1.18□□□□□ -2.22
HCM1P25364 AI1Q0050 2505 nt1.17□□□□□ -2.22
HCM1P25364 YLR149C-AYLR149C-A 87 nt1.17□□□□□ -2.22
HCM1P25364 YOL014WYOL014W 375 nt1.17□□□□□ -2.22
HCM1P25364 YBR296C-AYBR296C-A 120 nt1.16□□□□□ -2.22
HCM1P25364 YNL054W-BYNL054W-B 5250 nt1.16□□□□□ -2.22
HCM1P25364 BUL2YML111W 2763 nt1.15□□□□□ -2.22
HCM1P25364 BUD3YCL014W 4911 nt1.14□□□□□ -2.23
HCM1P25364 SPT7YBR081C 3999 nt1.14□□□□□ -2.23
HCM1P25364 YJL077W-AYJL077W-A 87 nt1.13□□□□□ -2.23
HCM1P25364 VAM6YDL077C 3150 nt1.12□□□□□ -2.23
HCM1P25364 tQ(UUG)QtQ(UUG)Q 76 nt1.09□□□□□ -2.23
HCM1P25364 SKI7YOR076C 2244 nt1.08□□□□□ -2.24
HCM1P25364 YKL096C-BYKL096C-B 150 nt1.08□□□□□ -2.24
HCM1P25364 RKR1YMR247C 4689 nt1.07□□□□□ -2.24
HCM1P25364 SCC2YDR180W 4482 nt1.05□□□□□ -2.24
HCM1P25364 BEM2YER155C 6504 nt1.05□□□□□ -2.24
HCM1P25364 YOR192C-BYOR192C-B 5313 nt1.03□□□□□ -2.24
HCM1P25364 YGR122C-AYGR122C-A 129 nt1.03□□□□□ -2.24
HCM1P25364 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
HCM1P25364 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
HCM1P25364 YER078W-AYER078W-A 165 nt1.02□□□□□ -2.25
HCM1P25364 YER090C-AYER090C-A 90 nt1.01□□□□□ -2.25
HCM1P25364 YMR160WYMR160W 2451 nt1□□□□□ -2.25
HCM1P25364 EMT1tM(CAU)D 73 nt0.99□□□□□ -2.25
HCM1P25364 EMT5tM(CAU)J1 73 nt0.99□□□□□ -2.25
HCM1P25364 EMT3tM(CAU)J2 73 nt0.99□□□□□ -2.25
HCM1P25364 EMT4tM(CAU)M 73 nt0.99□□□□□ -2.25
HCM1P25364 EMT2tM(CAU)O2 73 nt0.99□□□□□ -2.25
HCM1P25364 snR75snR75 89 nt0.97□□□□□ -2.25
HCM1P25364 YKL145W-AYKL145W-A 93 nt0.97□□□□□ -2.25
HCM1P25364 YPR117WYPR117W 7470 nt0.94□□□□□ -2.26
HCM1P25364 snR67snR67 82 nt0.86□□□□□ -2.27
HCM1P25364 PET111YMR257C 2403 nt0.85□□□□□ -2.27
HCM1P25364 YBL100W-BYBL100W-B 5313 nt0.8□□□□□ -2.28
HCM1P25364 LTE1YAL024C 4308 nt0.78□□□□□ -2.29
HCM1P25364 tT(AGU)BtT(AGU)B 73 nt0.74□□□□□ -2.29
HCM1P25364 tT(AGU)CtT(AGU)C 73 nt0.74□□□□□ -2.29
HCM1P25364 tT(AGU)DtT(AGU)D 73 nt0.74□□□□□ -2.29
HCM1P25364 tT(AGU)HtT(AGU)H 73 nt0.74□□□□□ -2.29
HCM1P25364 tT(AGU)I1tT(AGU)I1 73 nt0.74□□□□□ -2.29
HCM1P25364 tT(AGU)I2tT(AGU)I2 73 nt0.74□□□□□ -2.29
HCM1P25364 tT(AGU)JtT(AGU)J 73 nt0.74□□□□□ -2.29
HCM1P25364 tT(AGU)N1tT(AGU)N1 73 nt0.74□□□□□ -2.29
HCM1P25364 tT(AGU)N2tT(AGU)N2 73 nt0.74□□□□□ -2.29
HCM1P25364 tT(AGU)O1tT(AGU)O1 73 nt0.74□□□□□ -2.29
HCM1P25364 tT(AGU)O2tT(AGU)O2 73 nt0.74□□□□□ -2.29
HCM1P25364 THO2YNL139C 4794 nt0.7□□□□□ -2.3
HCM1P25364 YKL106C-AYKL106C-A 120 nt0.7□□□□□ -2.3
HCM1P25364 MLP2YIL149C 5040 nt0.68□□□□□ -2.3
HCM1P25364 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
HCM1P25364 YDL114W-AYDL114W-A 114 nt0.67□□□□□ -2.3
HCM1P25364 FMP27YLR454W 7887 nt0.66□□□□□ -2.3
HCM1P25364 IQG1YPL242C 4488 nt0.65□□□□□ -2.3
HCM1P25364 tV(UAC)QtV(UAC)Q 76 nt0.63□□□□□ -2.31
HCM1P25364 YPR159C-AYPR159C-A 102 nt0.61□□□□□ -2.31
HCM1P25364 MLP1YKR095W 5628 nt0.61□□□□□ -2.31
HCM1P25364 YML100W-AYML100W-A 174 nt0.59□□□□□ -2.31
HCM1P25364 YOR186C-AYOR186C-A 210 nt0.56□□□□□ -2.32
HCM1P25364 UTP10YJL109C 5310 nt0.55□□□□□ -2.32
HCM1P25364 YOR376W-AYOR376W-A 156 nt0.54□□□□□ -2.32
HCM1P25364 SOV1YMR066W 2697 nt0.5□□□□□ -2.33
HCM1P25364 YOR316C-AYOR316C-A 210 nt0.44□□□□□ -2.34
HCM1P25364 snR77snR77 88 nt0.41□□□□□ -2.34
HCM1P25364 ESP1YGR098C 4893 nt0.4□□□□□ -2.34
HCM1P25364 SBH2YER019C-A 267 nt0.37□□□□□ -2.35
HCM1P25364 snR128snR128 126 nt0.35□□□□□ -2.35
HCM1P25364 snR40snR40 97 nt0.35□□□□□ -2.35
HCM1P25364 PAU9YBL108C-A 129 nt0.33□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 50.9 ms