Protein–RNA interactions for Protein: P21771

MRPS28, 37S ribosomal protein S28, mitochondrial, yeast

Predictions only

Length 286 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	P21771	snR55	snR55	98 nt		-0.74	□□□□□ -2.53
MRPS28	P21771	PAU9	YBL108C-A	129 nt		-0.74	□□□□□ -2.53
MRPS28	P21771	snR49	snR49	165 nt		-0.75	□□□□□ -2.53
MRPS28	P21771	YHL009W-B	YHL009W-B	5409 nt		-0.76	□□□□□ -2.53
MRPS28	P21771	tM(CAU)Q2	tM(CAU)Q2	78 nt		-0.77	□□□□□ -2.53
MRPS28	P21771	YER090C-A	YER090C-A	90 nt		-0.79	□□□□□ -2.54
MRPS28	P21771	YGR146C-A	YGR146C-A	162 nt		-0.8	□□□□□ -2.54
MRPS28	P21771	snR39B	snR39B	96 nt		-0.8	□□□□□ -2.54
MRPS28	P21771	PMP2	YEL017C-A	132 nt		-0.81	□□□□□ -2.54
MRPS28	P21771	YNL266W	YNL266W	420 nt		-0.81	□□□□□ -2.54
MRPS28	P21771	YOR302W	YOR302W	78 nt		-0.81	□□□□□ -2.54
MRPS28	P21771	YPL152W-A	YPL152W-A	99 nt		-0.82	□□□□□ -2.54
MRPS28	P21771	snR50	snR50	90 nt		-0.82	□□□□□ -2.54
MRPS28	P21771	snR65	snR65	100 nt		-0.83	□□□□□ -2.54
MRPS28	P21771	YOR329W-A	YOR329W-A	210 nt		-0.83	□□□□□ -2.54
MRPS28	P21771	RDS3	YPR094W	324 nt		-0.83	□□□□□ -2.54
MRPS28	P21771	YHR175W-A	YHR175W-A	150 nt		-0.84	□□□□□ -2.54
MRPS28	P21771	YOL155W-A	YOL155W-A	135 nt		-0.84	□□□□□ -2.54
MRPS28	P21771	snR33	snR33	183 nt		-0.85	□□□□□ -2.55
MRPS28	P21771	JLP2	YMR132C	627 nt		-0.89	□□□□□ -2.55
MRPS28	P21771	tR(ACG)Q2	tR(ACG)Q2	74 nt		-0.9	□□□□□ -2.55
MRPS28	P21771	snR56	snR56	88 nt		-0.93	□□□□□ -2.56
MRPS28	P21771	tT(UGU)G1	tT(UGU)G1	72 nt		-0.94	□□□□□ -2.56
MRPS28	P21771	tT(UGU)G2	tT(UGU)G2	72 nt		-0.94	□□□□□ -2.56
MRPS28	P21771	tT(UGU)P	tT(UGU)P	72 nt		-0.94	□□□□□ -2.56
MRPS28	P21771	tD(GUC)Q	tD(GUC)Q	75 nt		-0.95	□□□□□ -2.56
MRPS28	P21771	snR48	snR48	113 nt		-0.96	□□□□□ -2.56
MRPS28	P21771	YGL188C-A	YGL188C-A	141 nt		-1	□□□□□ -2.57
MRPS28	P21771	YOR231C-A	YOR231C-A	201 nt		-1	□□□□□ -2.57
MRPS28	P21771	tL(UAA)Q	tL(UAA)Q	85 nt		-1.01	□□□□□ -2.57
MRPS28	P21771	YLR286W-A	YLR286W-A	135 nt		-1.01	□□□□□ -2.57
MRPS28	P21771	snR67	snR67	82 nt		-1.02	□□□□□ -2.57
MRPS28	P21771	YNL205C	YNL205C	423 nt		-1.02	□□□□□ -2.57
MRPS28	P21771	YBR178W	YBR178W	375 nt		-1.02	□□□□□ -2.57
MRPS28	P21771	SKI7	YOR076C	2244 nt		-1.03	□□□□□ -2.57
MRPS28	P21771	snR52	snR52	92 nt		-1.05	□□□□□ -2.58
MRPS28	P21771	snR80	snR80	171 nt		-1.06	□□□□□ -2.58
MRPS28	P21771	YDL159C-B	YDL159C-B	177 nt		-1.07	□□□□□ -2.58
MRPS28	P21771	snR161	snR161	161 nt		-1.09	□□□□□ -2.58
MRPS28	P21771	YDR524W-C	YDR524W-C	90 nt		-1.1	□□□□□ -2.59
MRPS28	P21771	YLR342W-A	YLR342W-A	174 nt		-1.1	□□□□□ -2.59
MRPS28	P21771	YOR102W	YOR102W	351 nt		-1.13	□□□□□ -2.59
MRPS28	P21771	YHL015W-A	YHL015W-A	84 nt		-1.17	□□□□□ -2.6
MRPS28	P21771	tP(UGG)Q	tP(UGG)Q	72 nt		-1.2	□□□□□ -2.6
MRPS28	P21771	YLR299C-A	YLR299C-A	93 nt		-1.23	□□□□□ -2.61
MRPS28	P21771	YML054C-A	YML054C-A	159 nt		-1.25	□□□□□ -2.61
MRPS28	P21771	YBR196C-A	YBR196C-A	150 nt		-1.25	□□□□□ -2.61
MRPS28	P21771	YBR223W-A	YBR223W-A	120 nt		-1.25	□□□□□ -2.61
MRPS28	P21771	YNR077C	YNR077C	255 nt		-1.26	□□□□□ -2.61
MRPS28	P21771	YNL198C	YNL198C	303 nt		-1.3	□□□□□ -2.62
MRPS28	P21771	YDR406W-A	YDR406W-A	246 nt		-1.34	□□□□□ -2.62
MRPS28	P21771	YBL053W	YBL053W	375 nt		-1.36	□□□□□ -2.63
MRPS28	P21771	YJL150W	YJL150W	303 nt		-1.38	□□□□□ -2.63
MRPS28	P21771	CDC65	tQ(CUG)M	72 nt		-1.4	□□□□□ -2.63
MRPS28	P21771	snR77	snR77	88 nt		-1.41	□□□□□ -2.64
MRPS28	P21771	YGR240C-A	YGR240C-A	201 nt		-1.45	□□□□□ -2.64
MRPS28	P21771	SOM1	YEL059C-A	225 nt		-1.46	□□□□□ -2.64
MRPS28	P21771	YOR376W-A	YOR376W-A	156 nt		-1.46	□□□□□ -2.64
MRPS28	P21771	YHR180C-B	YHR180C-B	105 nt		-1.48	□□□□□ -2.65
MRPS28	P21771	YCR095W-A	YCR095W-A	159 nt		-1.55	□□□□□ -2.66
MRPS28	P21771	YMR046W-A	YMR046W-A	129 nt		-1.59	□□□□□ -2.66
MRPS28	P21771	tY(GUA)Q	tY(GUA)Q	84 nt		-1.6	□□□□□ -2.67
MRPS28	P21771	YMR315W-A	YMR315W-A	108 nt		-1.61	□□□□□ -2.67
MRPS28	P21771	Q0142	Q0142	177 nt		-1.64	□□□□□ -2.67
MRPS28	P21771	snR81	snR81	201 nt		-1.65	□□□□□ -2.67
MRPS28	P21771	YOR316C-A	YOR316C-A	210 nt		-1.65	□□□□□ -2.67
MRPS28	P21771	SPG3	YDR504C	384 nt		-1.66	□□□□□ -2.68
MRPS28	P21771	YKL106C-A	YKL106C-A	120 nt		-1.67	□□□□□ -2.68
MRPS28	P21771	YBR109W-A	YBR109W-A	225 nt		-1.69	□□□□□ -2.68
MRPS28	P21771	YGR151C	YGR151C	336 nt		-1.72	□□□□□ -2.68
MRPS28	P21771	YBR296C-A	YBR296C-A	120 nt		-1.72	□□□□□ -2.68
MRPS28	P21771	YBL071C-B	YBL071C-B	99 nt		-1.75	□□□□□ -2.69
MRPS28	P21771	RPL41A	YDL184C	78 nt		-1.76	□□□□□ -2.69
MRPS28	P21771	YOL083C-A	YOL083C-A	141 nt		-1.76	□□□□□ -2.69
MRPS28	P21771	snR38	snR38	95 nt		-1.77	□□□□□ -2.69
MRPS28	P21771	tM(CAU)Q1	tM(CAU)Q1	76 nt		-1.82	□□□□□ -2.7
MRPS28	P21771	YCL001W-B	YCL001W-B	255 nt		-1.84	□□□□□ -2.7
MRPS28	P21771	YOL164W-A	YOL164W-A	183 nt		-1.85	□□□□□ -2.71
MRPS28	P21771	YLR466C-B	YLR466C-B	117 nt		-1.87	□□□□□ -2.71
MRPS28	P21771	YAL037C-A	YAL037C-A	93 nt		-1.9	□□□□□ -2.71
MRPS28	P21771	YOR309C	YOR309C	381 nt		-1.91	□□□□□ -2.72
MRPS28	P21771	snR47	snR47	99 nt		-1.95	□□□□□ -2.72
MRPS28	P21771	YNL338W	YNL338W	159 nt		-1.98	□□□□□ -2.73
MRPS28	P21771	YBL100W-C	YBL100W-C	120 nt		-2.06	□□□□□ -2.74
MRPS28	P21771	snR6	snR6	112 nt		-2.09	□□□□□ -2.74
MRPS28	P21771	YNL337W	YNL337W	255 nt		-2.09	□□□□□ -2.74
MRPS28	P21771	tS(GCU)Q1	tS(GCU)Q1	86 nt		-2.16	□□□□□ -2.76
MRPS28	P21771	YKL225W	YKL225W	348 nt		-2.19	□□□□□ -2.76
MRPS28	P21771	YOR335W-A	YOR335W-A	81 nt		-2.22	□□□□□ -2.76
MRPS28	P21771	snR73	snR73	106 nt		-2.28	□□□□□ -2.77
MRPS28	P21771	tV(UAC)Q	tV(UAC)Q	76 nt		-2.28	□□□□□ -2.77
MRPS28	P21771	YBR126W-B	YBR126W-B	144 nt		-2.3	□□□□□ -2.78
MRPS28	P21771	YDL114W-A	YDL114W-A	114 nt		-2.31	□□□□□ -2.78
MRPS28	P21771	Q0032	Q0032	291 nt		-2.33	□□□□□ -2.78
MRPS28	P21771	YGL041C-B	YGL041C-B	183 nt		-2.34	□□□□□ -2.78
MRPS28	P21771	RPL41B	YDL133C-A	78 nt		-2.36	□□□□□ -2.79
MRPS28	P21771	YNL103W-A	YNL103W-A	90 nt		-2.39	□□□□□ -2.79
MRPS28	P21771	YGL007C-A	YGL007C-A	87 nt		-2.4	□□□□□ -2.79
MRPS28	P21771	snR61	snR61	90 nt		-2.42	□□□□□ -2.8
MRPS28	P21771	YDR034C-A	YDR034C-A	177 nt		-2.43	□□□□□ -2.8

Retrieved 100 of 7,029 protein–RNA pairs in 39.2 ms