Protein–RNA interactions for Protein: P16370

RPB3, DNA-directed RNA polymerase II subunit RPB3, yeastyeast

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB3P16370 snR49snR49 165 nt-0.96□□□□□ -2.56
RPB3P16370 YNL277W-AYNL277W-A 189 nt-0.98□□□□□ -2.57
RPB3P16370 YBR131C-AYBR131C-A 90 nt-0.98□□□□□ -2.57
RPB3P16370 YER181CYER181C 324 nt-0.99□□□□□ -2.57
RPB3P16370 YER090C-AYER090C-A 90 nt-1□□□□□ -2.57
RPB3P16370 YOR170WYOR170W 306 nt-1□□□□□ -2.57
RPB3P16370 GIM4YEL003W 336 nt-1.02□□□□□ -2.57
RPB3P16370 YNL266WYNL266W 420 nt-1.02□□□□□ -2.57
RPB3P16370 RDS3YPR094W 324 nt-1.02□□□□□ -2.57
RPB3P16370 snR39BsnR39B 96 nt-1.03□□□□□ -2.57
RPB3P16370 snR50snR50 90 nt-1.03□□□□□ -2.57
RPB3P16370 YGR146C-AYGR146C-A 162 nt-1.04□□□□□ -2.58
RPB3P16370 PMP2YEL017C-A 132 nt-1.05□□□□□ -2.58
RPB3P16370 YFL019CYFL019C 354 nt-1.05□□□□□ -2.58
RPB3P16370 Q0144Q0144 330 nt-1.05□□□□□ -2.58
RPB3P16370 snR55snR55 98 nt-1.06□□□□□ -2.58
RPB3P16370 tP(UGG)QtP(UGG)Q 72 nt-1.06□□□□□ -2.58
RPB3P16370 YBR223W-AYBR223W-A 120 nt-1.07□□□□□ -2.58
RPB3P16370 YOR329W-AYOR329W-A 210 nt-1.12□□□□□ -2.59
RPB3P16370 JLP2YMR132C 627 nt-1.16□□□□□ -2.6
RPB3P16370 YNL097C-BYNL097C-B 123 nt-1.16□□□□□ -2.6
RPB3P16370 tD(GUC)QtD(GUC)Q 75 nt-1.19□□□□□ -2.6
RPB3P16370 snR67snR67 82 nt-1.2□□□□□ -2.6
RPB3P16370 YOL155W-AYOL155W-A 135 nt-1.21□□□□□ -2.6
RPB3P16370 YLR286W-AYLR286W-A 135 nt-1.23□□□□□ -2.61
RPB3P16370 YNR077CYNR077C 255 nt-1.25□□□□□ -2.61
RPB3P16370 YBR178WYBR178W 375 nt-1.25□□□□□ -2.61
RPB3P16370 YOR302WYOR302W 78 nt-1.27□□□□□ -2.61
RPB3P16370 snR65snR65 100 nt-1.28□□□□□ -2.61
RPB3P16370 YNL205CYNL205C 423 nt-1.28□□□□□ -2.61
RPB3P16370 YPL152W-AYPL152W-A 99 nt-1.28□□□□□ -2.61
RPB3P16370 SKI7YOR076C 2244 nt-1.3□□□□□ -2.62
RPB3P16370 YDL159C-BYDL159C-B 177 nt-1.3□□□□□ -2.62
RPB3P16370 snR48snR48 113 nt-1.32□□□□□ -2.62
RPB3P16370 YHR175W-AYHR175W-A 150 nt-1.36□□□□□ -2.63
RPB3P16370 tY(GUA)QtY(GUA)Q 84 nt-1.37□□□□□ -2.63
RPB3P16370 YGL188C-AYGL188C-A 141 nt-1.38□□□□□ -2.63
RPB3P16370 YOR102WYOR102W 351 nt-1.38□□□□□ -2.63
RPB3P16370 snR52snR52 92 nt-1.38□□□□□ -2.63
RPB3P16370 tL(UAA)QtL(UAA)Q 85 nt-1.39□□□□□ -2.63
RPB3P16370 YLR342W-AYLR342W-A 174 nt-1.41□□□□□ -2.64
RPB3P16370 YML054C-AYML054C-A 159 nt-1.46□□□□□ -2.64
RPB3P16370 YHL015W-AYHL015W-A 84 nt-1.47□□□□□ -2.64
RPB3P16370 tR(ACG)Q2tR(ACG)Q2 74 nt-1.47□□□□□ -2.64
RPB3P16370 YLR299C-AYLR299C-A 93 nt-1.48□□□□□ -2.65
RPB3P16370 snR56snR56 88 nt-1.49□□□□□ -2.65
RPB3P16370 YBR196C-AYBR196C-A 150 nt-1.51□□□□□ -2.65
RPB3P16370 CDC65tQ(CUG)M 72 nt-1.53□□□□□ -2.65
RPB3P16370 snR80snR80 171 nt-1.55□□□□□ -2.66
RPB3P16370 YOR231C-AYOR231C-A 201 nt-1.55□□□□□ -2.66
RPB3P16370 snR77snR77 88 nt-1.57□□□□□ -2.66
RPB3P16370 YGR240C-AYGR240C-A 201 nt-1.62□□□□□ -2.67
RPB3P16370 snR81snR81 201 nt-1.63□□□□□ -2.67
RPB3P16370 YMR315W-AYMR315W-A 108 nt-1.66□□□□□ -2.68
RPB3P16370 YDR524W-CYDR524W-C 90 nt-1.69□□□□□ -2.68
RPB3P16370 YDR406W-AYDR406W-A 246 nt-1.72□□□□□ -2.68
RPB3P16370 YNL198CYNL198C 303 nt-1.72□□□□□ -2.68
RPB3P16370 YHR180C-BYHR180C-B 105 nt-1.73□□□□□ -2.69
RPB3P16370 YOR376W-AYOR376W-A 156 nt-1.75□□□□□ -2.69
RPB3P16370 SOM1YEL059C-A 225 nt-1.8□□□□□ -2.7
RPB3P16370 YJL150WYJL150W 303 nt-1.81□□□□□ -2.7
RPB3P16370 YBR126W-BYBR126W-B 144 nt-1.83□□□□□ -2.7
RPB3P16370 YBL053WYBL053W 375 nt-1.85□□□□□ -2.71
RPB3P16370 YOR309CYOR309C 381 nt-1.87□□□□□ -2.71
RPB3P16370 YCR095W-AYCR095W-A 159 nt-1.92□□□□□ -2.72
RPB3P16370 YKL106C-AYKL106C-A 120 nt-1.92□□□□□ -2.72
RPB3P16370 YOR316C-AYOR316C-A 210 nt-1.93□□□□□ -2.72
RPB3P16370 YBR296C-AYBR296C-A 120 nt-2.05□□□□□ -2.74
RPB3P16370 RPL41AYDL184C 78 nt-2.06□□□□□ -2.74
RPB3P16370 YBR109W-AYBR109W-A 225 nt-2.06□□□□□ -2.74
RPB3P16370 YMR046W-AYMR046W-A 129 nt-2.09□□□□□ -2.74
RPB3P16370 YGR151CYGR151C 336 nt-2.12□□□□□ -2.75
RPB3P16370 YOL083C-AYOL083C-A 141 nt-2.13□□□□□ -2.75
RPB3P16370 YBL071C-BYBL071C-B 99 nt-2.19□□□□□ -2.76
RPB3P16370 SPG3YDR504C 384 nt-2.2□□□□□ -2.76
RPB3P16370 snR38snR38 95 nt-2.2□□□□□ -2.76
RPB3P16370 YOL164W-AYOL164W-A 183 nt-2.25□□□□□ -2.77
RPB3P16370 YCL001W-BYCL001W-B 255 nt-2.3□□□□□ -2.78
RPB3P16370 YAL037C-AYAL037C-A 93 nt-2.33□□□□□ -2.78
RPB3P16370 snR47snR47 99 nt-2.33□□□□□ -2.78
RPB3P16370 tM(CAU)Q1tM(CAU)Q1 76 nt-2.37□□□□□ -2.79
RPB3P16370 snR6snR6 112 nt-2.38□□□□□ -2.79
RPB3P16370 YBL100W-CYBL100W-C 120 nt-2.38□□□□□ -2.79
RPB3P16370 YDR543CYDR543C 300 nt-2.42□□□□□ -2.8
RPB3P16370 YLR466C-BYLR466C-B 117 nt-2.42□□□□□ -2.8
RPB3P16370 Q0142Q0142 177 nt-2.43□□□□□ -2.8
RPB3P16370 snR73snR73 106 nt-2.51□□□□□ -2.81
RPB3P16370 YNL338WYNL338W 159 nt-2.51□□□□□ -2.81
RPB3P16370 YOR335W-AYOR335W-A 81 nt-2.51□□□□□ -2.81
RPB3P16370 YNL337WYNL337W 255 nt-2.56□□□□□ -2.82
RPB3P16370 RPL41BYDL133C-A 78 nt-2.6□□□□□ -2.83
RPB3P16370 YKL225WYKL225W 348 nt-2.61□□□□□ -2.83
RPB3P16370 tS(GCU)Q1tS(GCU)Q1 86 nt-2.62□□□□□ -2.83
RPB3P16370 YDL114W-AYDL114W-A 114 nt-2.69□□□□□ -2.84
RPB3P16370 YDR524C-AYDR524C-A 120 nt-2.73□□□□□ -2.85
RPB3P16370 tV(UAC)QtV(UAC)Q 76 nt-2.73□□□□□ -2.85
RPB3P16370 snR85snR85 171 nt-2.81□□□□□ -2.86
RPB3P16370 YGL041C-BYGL041C-B 183 nt-2.84□□□□□ -2.86
RPB3P16370 YDR034C-AYDR034C-A 177 nt-2.89□□□□□ -2.87
RPB3P16370 YOL166W-AYOL166W-A 156 nt-2.89□□□□□ -2.87
Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms