Protein–RNA interactions for Protein: P0CX84

RPL35A, 60S ribosomal protein L35-A, yeastyeast

Known RBP Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL35AP0CX84 YEL014CYEL014C 306 nt-2.01□□□□□ -2.73
RPL35AP0CX84 YLR286W-AYLR286W-A 135 nt-2.01□□□□□ -2.73
RPL35AP0CX84 YBR126W-BYBR126W-B 144 nt-2.01□□□□□ -2.73
RPL35AP0CX84 YBR182C-AYBR182C-A 195 nt-2.01□□□□□ -2.73
RPL35AP0CX84 YAL016C-BYAL016C-B 186 nt-2.02□□□□□ -2.73
RPL35AP0CX84 YML054C-AYML054C-A 159 nt-2.02□□□□□ -2.73
RPL35AP0CX84 CDC65tQ(CUG)M 72 nt-2.04□□□□□ -2.74
RPL35AP0CX84 YOR008C-AYOR008C-A 225 nt-2.04□□□□□ -2.74
RPL35AP0CX84 YJR157WYJR157W 363 nt-2.07□□□□□ -2.74
RPL35AP0CX84 YGR240C-AYGR240C-A 201 nt-2.08□□□□□ -2.74
RPL35AP0CX84 YNL205CYNL205C 423 nt-2.1□□□□□ -2.75
RPL35AP0CX84 YPL038W-AYPL038W-A 192 nt-2.1□□□□□ -2.75
RPL35AP0CX84 YDL159C-BYDL159C-B 177 nt-2.12□□□□□ -2.75
RPL35AP0CX84 YOR329W-AYOR329W-A 210 nt-2.12□□□□□ -2.75
RPL35AP0CX84 YBR178WYBR178W 375 nt-2.12□□□□□ -2.75
RPL35AP0CX84 snR77snR77 88 nt-2.15□□□□□ -2.75
RPL35AP0CX84 tF(GAA)QtF(GAA)Q 75 nt-2.17□□□□□ -2.76
RPL35AP0CX84 YBR131C-AYBR131C-A 90 nt-2.18□□□□□ -2.76
RPL35AP0CX84 YER181CYER181C 324 nt-2.19□□□□□ -2.76
RPL35AP0CX84 YPR197CYPR197C 564 nt-2.19□□□□□ -2.76
RPL35AP0CX84 snR81snR81 201 nt-2.24□□□□□ -2.77
RPL35AP0CX84 YDR413CYDR413C 576 nt-2.26□□□□□ -2.77
RPL35AP0CX84 RPL39YJL189W 156 nt-2.27□□□□□ -2.77
RPL35AP0CX84 YMR315W-AYMR315W-A 108 nt-2.28□□□□□ -2.77
RPL35AP0CX84 YDR157WYDR157W 402 nt-2.31□□□□□ -2.78
RPL35AP0CX84 YDR543CYDR543C 300 nt-2.36□□□□□ -2.79
RPL35AP0CX84 YLR222C-AYLR222C-A 231 nt-2.36□□□□□ -2.79
RPL35AP0CX84 YLR299C-AYLR299C-A 93 nt-2.36□□□□□ -2.79
RPL35AP0CX84 YNL097C-BYNL097C-B 123 nt-2.38□□□□□ -2.79
RPL35AP0CX84 snR55snR55 98 nt-2.39□□□□□ -2.79
RPL35AP0CX84 YNL277W-AYNL277W-A 189 nt-2.39□□□□□ -2.79
RPL35AP0CX84 Q0017Q0017 162 nt-2.39□□□□□ -2.79
RPL35AP0CX84 snR48snR48 113 nt-2.4□□□□□ -2.79
RPL35AP0CX84 YOR102WYOR102W 351 nt-2.42□□□□□ -2.8
RPL35AP0CX84 YBR196C-AYBR196C-A 150 nt-2.43□□□□□ -2.8
RPL35AP0CX84 YOR376W-AYOR376W-A 156 nt-2.45□□□□□ -2.8
RPL35AP0CX84 YDL240C-AYDL240C-A 138 nt-2.46□□□□□ -2.8
RPL35AP0CX84 YGL188C-AYGL188C-A 141 nt-2.48□□□□□ -2.81
RPL35AP0CX84 YKL118WYKL118W 312 nt-2.49□□□□□ -2.81
RPL35AP0CX84 tL(UAA)QtL(UAA)Q 85 nt-2.53□□□□□ -2.81
RPL35AP0CX84 YOR309CYOR309C 381 nt-2.59□□□□□ -2.82
RPL35AP0CX84 YOL155W-AYOL155W-A 135 nt-2.62□□□□□ -2.83
RPL35AP0CX84 YOL166W-AYOL166W-A 156 nt-2.62□□□□□ -2.83
RPL35AP0CX84 GIM4YEL003W 336 nt-2.63□□□□□ -2.83
RPL35AP0CX84 YHR180C-BYHR180C-B 105 nt-2.63□□□□□ -2.83
RPL35AP0CX84 YDR118W-AYDR118W-A 117 nt-2.64□□□□□ -2.83
RPL35AP0CX84 YOR302WYOR302W 78 nt-2.64□□□□□ -2.83
RPL35AP0CX84 YOR316C-AYOR316C-A 210 nt-2.66□□□□□ -2.84
RPL35AP0CX84 Q0142Q0142 177 nt-2.67□□□□□ -2.84
RPL35AP0CX84 YLR342W-AYLR342W-A 174 nt-2.71□□□□□ -2.84
RPL35AP0CX84 snR52snR52 92 nt-2.73□□□□□ -2.85
RPL35AP0CX84 YHL015W-AYHL015W-A 84 nt-2.74□□□□□ -2.85
RPL35AP0CX84 YKL106C-AYKL106C-A 120 nt-2.76□□□□□ -2.85
RPL35AP0CX84 YPR012WYPR012W 255 nt-2.79□□□□□ -2.86
RPL35AP0CX84 YJL150WYJL150W 303 nt-2.83□□□□□ -2.86
RPL35AP0CX84 YPL152W-AYPL152W-A 99 nt-2.83□□□□□ -2.86
RPL35AP0CX84 VAR1Q0140 1197 nt-2.84□□□□□ -2.86
RPL35AP0CX84 YOL083C-AYOL083C-A 141 nt-2.88□□□□□ -2.87
RPL35AP0CX84 YNL198CYNL198C 303 nt-2.89□□□□□ -2.87
RPL35AP0CX84 snR65snR65 100 nt-2.93□□□□□ -2.88
RPL35AP0CX84 YDR524W-CYDR524W-C 90 nt-2.95□□□□□ -2.88
RPL35AP0CX84 YBR109W-AYBR109W-A 225 nt-2.97□□□□□ -2.88
RPL35AP0CX84 snR56snR56 88 nt-3□□□□□ -2.89
RPL35AP0CX84 YBR296C-AYBR296C-A 120 nt-3.05□□□□□ -2.9
RPL35AP0CX84 SOM1YEL059C-A 225 nt-3.06□□□□□ -2.9
RPL35AP0CX84 RPL41AYDL184C 78 nt-3.09□□□□□ -2.9
RPL35AP0CX84 snR6snR6 112 nt-3.17□□□□□ -2.92
RPL35AP0CX84 YCR095W-AYCR095W-A 159 nt-3.19□□□□□ -2.92
RPL35AP0CX84 snR80snR80 171 nt-3.19□□□□□ -2.92
RPL35AP0CX84 snR38snR38 95 nt-3.22□□□□□ -2.92
RPL35AP0CX84 YBL053WYBL053W 375 nt-3.29□□□□□ -2.94
RPL35AP0CX84 YDR406W-AYDR406W-A 246 nt-3.31□□□□□ -2.94
RPL35AP0CX84 YOR335W-AYOR335W-A 81 nt-3.35□□□□□ -2.95
RPL35AP0CX84 snR73snR73 106 nt-3.37□□□□□ -2.95
RPL35AP0CX84 YJR162CYJR162C 351 nt-3.37□□□□□ -2.95
RPL35AP0CX84 YNL337WYNL337W 255 nt-3.37□□□□□ -2.95
RPL35AP0CX84 YOR231C-AYOR231C-A 201 nt-3.37□□□□□ -2.95
RPL35AP0CX84 YGR151CYGR151C 336 nt-3.39□□□□□ -2.95
RPL35AP0CX84 YBL071C-BYBL071C-B 99 nt-3.39□□□□□ -2.95
RPL35AP0CX84 RPL41BYDL133C-A 78 nt-3.4□□□□□ -2.95
RPL35AP0CX84 YOL164W-AYOL164W-A 183 nt-3.43□□□□□ -2.96
RPL35AP0CX84 YHR175W-AYHR175W-A 150 nt-3.51□□□□□ -2.97
RPL35AP0CX84 snR47snR47 99 nt-3.55□□□□□ -2.98
RPL35AP0CX84 YDR524C-AYDR524C-A 120 nt-3.61□□□□□ -2.99
RPL35AP0CX84 YAL037C-AYAL037C-A 93 nt-3.62□□□□□ -2.99
RPL35AP0CX84 YBL100W-CYBL100W-C 120 nt-3.65□□□□□ -2.99
RPL35AP0CX84 tR(ACG)Q2tR(ACG)Q2 74 nt-3.66□□□□□ -3
RPL35AP0CX84 Q0144Q0144 330 nt-3.72□□□□□ -3
RPL35AP0CX84 tV(UAC)QtV(UAC)Q 76 nt-3.73□□□□□ -3.01
RPL35AP0CX84 YDL114W-AYDL114W-A 114 nt-3.74□□□□□ -3.01
RPL35AP0CX84 snR85snR85 171 nt-3.78□□□□□ -3.01
RPL35AP0CX84 YKL225WYKL225W 348 nt-3.81□□□□□ -3.02
RPL35AP0CX84 YCL001W-BYCL001W-B 255 nt-3.83□□□□□ -3.02
RPL35AP0CX84 YMR046W-AYMR046W-A 129 nt-3.9□□□□□ -3.03
RPL35AP0CX84 tS(GCU)Q1tS(GCU)Q1 86 nt-3.92□□□□□ -3.04
RPL35AP0CX84 SPG3YDR504C 384 nt-3.95□□□□□ -3.04
RPL35AP0CX84 snR87snR87 109 nt-4.27□□□□□ -3.09
RPL35AP0CX84 YGR122C-AYGR122C-A 129 nt-4.27□□□□□ -3.09
RPL35AP0CX84 YLR466C-BYLR466C-B 117 nt-4.29□□□□□ -3.1
RPL35AP0CX84 YDL159W-AYDL159W-A 132 nt-4.32□□□□□ -3.1
Retrieved 100 of 7,029 protein–RNA pairs in 83 ms