Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 YJR157WYJR157W 363 nt-2.35□□□□□ -2.79
TY1B-PR2P0C2J0 STE18YJR086W 333 nt-2.36□□□□□ -2.79
TY1B-PR2P0C2J0 YLR434CYLR434C 384 nt-2.36□□□□□ -2.79
TY1B-PR2P0C2J0 YHR180C-BYHR180C-B 105 nt-2.37□□□□□ -2.79
TY1B-PR2P0C2J0 ATP6Q0085 780 nt-2.38□□□□□ -2.79
TY1B-PR2P0C2J0 ATP19YOL077W-A 207 nt-2.38□□□□□ -2.79
TY1B-PR2P0C2J0 YAL016C-BYAL016C-B 186 nt-2.39□□□□□ -2.79
TY1B-PR2P0C2J0 YBR178WYBR178W 375 nt-2.41□□□□□ -2.79
TY1B-PR2P0C2J0 snR41snR41 95 nt-2.46□□□□□ -2.8
TY1B-PR2P0C2J0 Q0255Q0255 1419 nt-2.46□□□□□ -2.8
TY1B-PR2P0C2J0 YOR381W-AYOR381W-A 168 nt-2.48□□□□□ -2.81
TY1B-PR2P0C2J0 YLR406C-AYLR406C-A 150 nt-2.49□□□□□ -2.81
TY1B-PR2P0C2J0 YOR329W-AYOR329W-A 210 nt-2.49□□□□□ -2.81
TY1B-PR2P0C2J0 YEL014CYEL014C 306 nt-2.49□□□□□ -2.81
TY1B-PR2P0C2J0 YLR299C-AYLR299C-A 93 nt-2.51□□□□□ -2.81
TY1B-PR2P0C2J0 YKL123WYKL123W 381 nt-2.53□□□□□ -2.81
TY1B-PR2P0C2J0 YLR120W-AYLR120W-A 102 nt-2.53□□□□□ -2.81
TY1B-PR2P0C2J0 snR55snR55 98 nt-2.54□□□□□ -2.82
TY1B-PR2P0C2J0 tW(UCA)QtW(UCA)Q 74 nt-2.54□□□□□ -2.82
TY1B-PR2P0C2J0 YNL122CYNL122C 348 nt-2.54□□□□□ -2.82
TY1B-PR2P0C2J0 HTL1YCR020W-B 237 nt-2.57□□□□□ -2.82
TY1B-PR2P0C2J0 snR78snR78 87 nt-2.57□□□□□ -2.82
TY1B-PR2P0C2J0 YLR285C-AYLR285C-A 171 nt-2.57□□□□□ -2.82
TY1B-PR2P0C2J0 YGL041CYGL041C 204 nt-2.59□□□□□ -2.82
TY1B-PR2P0C2J0 YER181CYER181C 324 nt-2.59□□□□□ -2.82
TY1B-PR2P0C2J0 BIL1YOR304C-A 231 nt-2.59□□□□□ -2.82
TY1B-PR2P0C2J0 snR80snR80 171 nt-2.61□□□□□ -2.83
TY1B-PR2P0C2J0 YPR012WYPR012W 255 nt-2.66□□□□□ -2.84
TY1B-PR2P0C2J0 YOL155W-AYOL155W-A 135 nt-2.67□□□□□ -2.84
TY1B-PR2P0C2J0 snR6snR6 112 nt-2.7□□□□□ -2.84
TY1B-PR2P0C2J0 YKL106C-AYKL106C-A 120 nt-2.74□□□□□ -2.85
TY1B-PR2P0C2J0 YDR524C-AYDR524C-A 120 nt-2.74□□□□□ -2.85
TY1B-PR2P0C2J0 YAL063C-AYAL063C-A 291 nt-2.77□□□□□ -2.85
TY1B-PR2P0C2J0 YLR222C-AYLR222C-A 231 nt-2.78□□□□□ -2.85
TY1B-PR2P0C2J0 YOR102WYOR102W 351 nt-2.79□□□□□ -2.86
TY1B-PR2P0C2J0 YDR183C-AYDR183C-A 258 nt-2.83□□□□□ -2.86
TY1B-PR2P0C2J0 YKL118WYKL118W 312 nt-2.83□□□□□ -2.86
TY1B-PR2P0C2J0 RPL41AYDL184C 78 nt-2.84□□□□□ -2.86
TY1B-PR2P0C2J0 YJR162CYJR162C 351 nt-2.84□□□□□ -2.86
TY1B-PR2P0C2J0 YNL337WYNL337W 255 nt-2.84□□□□□ -2.86
TY1B-PR2P0C2J0 snR73snR73 106 nt-2.85□□□□□ -2.87
TY1B-PR2P0C2J0 YDR413CYDR413C 576 nt-2.85□□□□□ -2.87
TY1B-PR2P0C2J0 YOR335W-AYOR335W-A 81 nt-2.85□□□□□ -2.87
TY1B-PR2P0C2J0 YBR131C-AYBR131C-A 90 nt-2.86□□□□□ -2.87
TY1B-PR2P0C2J0 YJL150WYJL150W 303 nt-2.88□□□□□ -2.87
TY1B-PR2P0C2J0 YGR035CYGR035C 351 nt-2.92□□□□□ -2.88
TY1B-PR2P0C2J0 RPL41BYDL133C-A 78 nt-2.93□□□□□ -2.88
TY1B-PR2P0C2J0 tF(GAA)QtF(GAA)Q 75 nt-2.95□□□□□ -2.88
TY1B-PR2P0C2J0 YBR109W-AYBR109W-A 225 nt-2.97□□□□□ -2.88
TY1B-PR2P0C2J0 snR38snR38 95 nt-2.97□□□□□ -2.88
TY1B-PR2P0C2J0 YNR025CYNR025C 360 nt-2.97□□□□□ -2.89
TY1B-PR2P0C2J0 YBR296C-AYBR296C-A 120 nt-3□□□□□ -2.89
TY1B-PR2P0C2J0 GIM4YEL003W 336 nt-3.02□□□□□ -2.89
TY1B-PR2P0C2J0 YGL188C-AYGL188C-A 141 nt-3.02□□□□□ -2.89
TY1B-PR2P0C2J0 snR48snR48 113 nt-3.03□□□□□ -2.89
TY1B-PR2P0C2J0 YNL198CYNL198C 303 nt-3.06□□□□□ -2.9
TY1B-PR2P0C2J0 tL(UAA)QtL(UAA)Q 85 nt-3.07□□□□□ -2.9
TY1B-PR2P0C2J0 YDR406W-AYDR406W-A 246 nt-3.07□□□□□ -2.9
TY1B-PR2P0C2J0 YPL038W-AYPL038W-A 192 nt-3.08□□□□□ -2.9
TY1B-PR2P0C2J0 snR56snR56 88 nt-3.14□□□□□ -2.91
TY1B-PR2P0C2J0 YNL097C-BYNL097C-B 123 nt-3.15□□□□□ -2.91
TY1B-PR2P0C2J0 tV(UAC)QtV(UAC)Q 76 nt-3.23□□□□□ -2.93
TY1B-PR2P0C2J0 RPL39YJL189W 156 nt-3.24□□□□□ -2.93
TY1B-PR2P0C2J0 snR87snR87 109 nt-3.25□□□□□ -2.93
TY1B-PR2P0C2J0 snR85snR85 171 nt-3.29□□□□□ -2.94
TY1B-PR2P0C2J0 YDL114W-AYDL114W-A 114 nt-3.3□□□□□ -2.94
TY1B-PR2P0C2J0 YOR302WYOR302W 78 nt-3.31□□□□□ -2.94
TY1B-PR2P0C2J0 tR(UCU)Q1tR(UCU)Q1 73 nt-3.32□□□□□ -2.94
TY1B-PR2P0C2J0 YHL015W-AYHL015W-A 84 nt-3.36□□□□□ -2.95
TY1B-PR2P0C2J0 SOM1YEL059C-A 225 nt-3.38□□□□□ -2.95
TY1B-PR2P0C2J0 snR47snR47 99 nt-3.38□□□□□ -2.95
TY1B-PR2P0C2J0 snR52snR52 92 nt-3.38□□□□□ -2.95
TY1B-PR2P0C2J0 YBL071C-BYBL071C-B 99 nt-3.39□□□□□ -2.95
TY1B-PR2P0C2J0 YCR095W-AYCR095W-A 159 nt-3.43□□□□□ -2.96
TY1B-PR2P0C2J0 YOL164W-AYOL164W-A 183 nt-3.44□□□□□ -2.96
TY1B-PR2P0C2J0 YGR151CYGR151C 336 nt-3.45□□□□□ -2.96
TY1B-PR2P0C2J0 YNL277W-AYNL277W-A 189 nt-3.47□□□□□ -2.96
TY1B-PR2P0C2J0 snR58snR58 96 nt-3.48□□□□□ -2.97
TY1B-PR2P0C2J0 YDR157WYDR157W 402 nt-3.52□□□□□ -2.97
TY1B-PR2P0C2J0 YDL240C-AYDL240C-A 138 nt-3.53□□□□□ -2.98
TY1B-PR2P0C2J0 YEL050W-AYEL050W-A 192 nt-3.55□□□□□ -2.98
TY1B-PR2P0C2J0 YBL053WYBL053W 375 nt-3.64□□□□□ -2.99
TY1B-PR2P0C2J0 YKL225WYKL225W 348 nt-3.65□□□□□ -2.99
TY1B-PR2P0C2J0 YJL136W-AYJL136W-A 84 nt-3.66□□□□□ -3
TY1B-PR2P0C2J0 YHR175W-AYHR175W-A 150 nt-3.67□□□□□ -3
TY1B-PR2P0C2J0 tS(GCU)Q1tS(GCU)Q1 86 nt-3.69□□□□□ -3
TY1B-PR2P0C2J0 YDR118W-AYDR118W-A 117 nt-3.71□□□□□ -3
TY1B-PR2P0C2J0 YAL037C-AYAL037C-A 93 nt-3.74□□□□□ -3.01
TY1B-PR2P0C2J0 SPG3YDR504C 384 nt-3.74□□□□□ -3.01
TY1B-PR2P0C2J0 YKL096C-BYKL096C-B 150 nt-3.75□□□□□ -3.01
TY1B-PR2P0C2J0 YDL159W-AYDL159W-A 132 nt-3.79□□□□□ -3.02
TY1B-PR2P0C2J0 YBL100W-CYBL100W-C 120 nt-3.8□□□□□ -3.02
TY1B-PR2P0C2J0 YGR122C-AYGR122C-A 129 nt-3.82□□□□□ -3.02
TY1B-PR2P0C2J0 YPL152W-AYPL152W-A 99 nt-3.91□□□□□ -3.03
TY1B-PR2P0C2J0 snR65snR65 100 nt-4.01□□□□□ -3.05
TY1B-PR2P0C2J0 YDR034C-AYDR034C-A 177 nt-4.03□□□□□ -3.05
TY1B-PR2P0C2J0 Q0017Q0017 162 nt-4.09□□□□□ -3.06
TY1B-PR2P0C2J0 YNL170WYNL170W 396 nt-4.09□□□□□ -3.06
TY1B-PR2P0C2J0 tC(GCA)QtC(GCA)Q 76 nt-4.2□□□□□ -3.08
TY1B-PR2P0C2J0 YGL007C-AYGL007C-A 87 nt-4.28□□□□□ -3.09
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms