Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 AP002982.1-201ENST00000492365 877 ntBASIC21.96■■□□□ 1.11
COL1A2P08123 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.96■■□□□ 1.11
COL1A2P08123 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A2P08123 AC026471.5-201ENST00000615068 467 ntBASIC21.96■■□□□ 1.11
COL1A2P08123 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A2P08123 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.96■■□□□ 1.11
COL1A2P08123 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL1A2P08123 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
COL1A2P08123 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.11
COL1A2P08123 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A2P08123 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.95■■□□□ 1.1
COL1A2P08123 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A2P08123 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A2P08123 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.95■■□□□ 1.1
COL1A2P08123 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.95■■□□□ 1.1
COL1A2P08123 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A2P08123 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
COL1A2P08123 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.95■■□□□ 1.1
COL1A2P08123 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A2P08123 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.95■■□□□ 1.1
COL1A2P08123 YBX1P10-201ENST00000444752 975 ntBASIC21.95■■□□□ 1.1
COL1A2P08123 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A2P08123 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.95■■□□□ 1.1
COL1A2P08123 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.95■■□□□ 1.1
COL1A2P08123 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.95■■□□□ 1.1
COL1A2P08123 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.95■■□□□ 1.1
COL1A2P08123 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
COL1A2P08123 AC018553.1-201ENST00000616682 1458 ntBASIC21.95■■□□□ 1.1
COL1A2P08123 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
COL1A2P08123 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL1A2P08123 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A2P08123 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
COL1A2P08123 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A2P08123 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.94■■□□□ 1.1
COL1A2P08123 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.94■■□□□ 1.1
COL1A2P08123 PHGDH-210ENST00000641115 1638 ntBASIC21.94■■□□□ 1.1
COL1A2P08123 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A2P08123 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.94■■□□□ 1.1
COL1A2P08123 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.94■■□□□ 1.1
COL1A2P08123 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A2P08123 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.94■■□□□ 1.1
COL1A2P08123 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A2P08123 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A2P08123 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A2P08123 AL355075.4-201ENST00000554988 638 ntBASIC21.94■■□□□ 1.1
COL1A2P08123 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
COL1A2P08123 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.94■■□□□ 1.1
COL1A2P08123 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A2P08123 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
COL1A2P08123 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.94■■□□□ 1.1
COL1A2P08123 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL1A2P08123 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
COL1A2P08123 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
COL1A2P08123 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A2P08123 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A2P08123 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A2P08123 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
COL1A2P08123 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A2P08123 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
COL1A2P08123 NIFKP9-201ENST00000419265 221 ntBASIC21.93■■□□□ 1.1
COL1A2P08123 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.93■■□□□ 1.1
COL1A2P08123 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A2P08123 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.93■■□□□ 1.1
COL1A2P08123 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
COL1A2P08123 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.93■■□□□ 1.1
COL1A2P08123 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.93■■□□□ 1.1
COL1A2P08123 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A2P08123 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.93■■□□□ 1.1
COL1A2P08123 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.93■■□□□ 1.1
COL1A2P08123 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.93■■□□□ 1.1
COL1A2P08123 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.93■■□□□ 1.1
COL1A2P08123 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.93■■□□□ 1.1
COL1A2P08123 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.93■■□□□ 1.1
COL1A2P08123 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A2P08123 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A2P08123 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A2P08123 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A2P08123 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A2P08123 FAM197Y1-201ENST00000421178 764 ntBASIC21.92■■□□□ 1.1
COL1A2P08123 C1QL1P1-201ENST00000568105 661 ntBASIC21.92■■□□□ 1.1
COL1A2P08123 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.92■■□□□ 1.1
COL1A2P08123 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
COL1A2P08123 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
COL1A2P08123 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A2P08123 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A2P08123 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.92■■□□□ 1.1
COL1A2P08123 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.92■■□□□ 1.1
COL1A2P08123 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
COL1A2P08123 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.91■■□□□ 1.1
COL1A2P08123 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A2P08123 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A2P08123 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.91■■□□□ 1.1
COL1A2P08123 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.91■■□□□ 1.1
COL1A2P08123 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
COL1A2P08123 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A2P08123 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.91■■□□□ 1.1
COL1A2P08123 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A2P08123 AL355355.2-201ENST00000442321 338 ntBASIC21.91■■□□□ 1.1
COL1A2P08123 KSR1P1-201ENST00000446298 240 ntBASIC21.91■■□□□ 1.1
COL1A2P08123 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms