Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SFTPBP07988 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SFTPBP07988 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SFTPBP07988 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SFTPBP07988 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SFTPBP07988 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SFTPBP07988 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SFTPBP07988 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.27■□□□□ 0.36
SFTPBP07988 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.27■□□□□ 0.36
SFTPBP07988 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.27■□□□□ 0.36
SFTPBP07988 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
SFTPBP07988 AC010536.3-201ENST00000620306 533 ntBASIC17.27■□□□□ 0.36
SFTPBP07988 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
SFTPBP07988 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SFTPBP07988 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
SFTPBP07988 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SFTPBP07988 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SFTPBP07988 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SFTPBP07988 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SFTPBP07988 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SFTPBP07988 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.27■□□□□ 0.35
SFTPBP07988 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
SFTPBP07988 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.27■□□□□ 0.35
SFTPBP07988 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SFTPBP07988 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SFTPBP07988 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SFTPBP07988 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SFTPBP07988 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SFTPBP07988 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.26■□□□□ 0.35
SFTPBP07988 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SFTPBP07988 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SFTPBP07988 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SFTPBP07988 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SFTPBP07988 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.26■□□□□ 0.35
SFTPBP07988 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.26■□□□□ 0.35
SFTPBP07988 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.26■□□□□ 0.35
SFTPBP07988 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SFTPBP07988 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SFTPBP07988 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SFTPBP07988 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SFTPBP07988 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SFTPBP07988 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.26■□□□□ 0.35
SFTPBP07988 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
SFTPBP07988 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.25■□□□□ 0.35
SFTPBP07988 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
SFTPBP07988 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SFTPBP07988 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SFTPBP07988 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.25■□□□□ 0.35
SFTPBP07988 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SFTPBP07988 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.25■□□□□ 0.35
SFTPBP07988 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SFTPBP07988 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.25■□□□□ 0.35
SFTPBP07988 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.25■□□□□ 0.35
SFTPBP07988 AC007322.1-201ENST00000426983 750 ntBASIC17.25■□□□□ 0.35
SFTPBP07988 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.25■□□□□ 0.35
SFTPBP07988 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.25■□□□□ 0.35
SFTPBP07988 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
SFTPBP07988 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.25■□□□□ 0.35
SFTPBP07988 AC231657.2-201ENST00000624556 255 ntBASIC17.25■□□□□ 0.35
SFTPBP07988 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.25■□□□□ 0.35
SFTPBP07988 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SFTPBP07988 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.25■□□□□ 0.35
SFTPBP07988 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.24■□□□□ 0.35
SFTPBP07988 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SFTPBP07988 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SFTPBP07988 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 KRT8P36-201ENST00000489121 1440 ntBASIC17.24■□□□□ 0.35
SFTPBP07988 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.24■□□□□ 0.35
SFTPBP07988 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.24■□□□□ 0.35
SFTPBP07988 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.24■□□□□ 0.35
SFTPBP07988 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.24■□□□□ 0.35
SFTPBP07988 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.24■□□□□ 0.35
SFTPBP07988 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SFTPBP07988 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SFTPBP07988 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.24■□□□□ 0.35
SFTPBP07988 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPBP07988 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.24■□□□□ 0.35
SFTPBP07988 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms