Protein–RNA interactions for Protein: P06844

SPT3, Protein SPT3, yeastyeast

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT3P06844 tF(GAA)QtF(GAA)Q 75 nt-1□□□□□ -2.57
SPT3P06844 YNL277W-AYNL277W-A 189 nt-1□□□□□ -2.57
SPT3P06844 YJL182CYJL182C 318 nt-1.01□□□□□ -2.57
SPT3P06844 YBR223W-AYBR223W-A 120 nt-1.03□□□□□ -2.57
SPT3P06844 snR49snR49 165 nt-1.03□□□□□ -2.57
SPT3P06844 YER181CYER181C 324 nt-1.05□□□□□ -2.58
SPT3P06844 GIM4YEL003W 336 nt-1.06□□□□□ -2.58
SPT3P06844 YER090C-AYER090C-A 90 nt-1.07□□□□□ -2.58
SPT3P06844 YFL019CYFL019C 354 nt-1.08□□□□□ -2.58
SPT3P06844 YOR170WYOR170W 306 nt-1.08□□□□□ -2.58
SPT3P06844 snR39BsnR39B 96 nt-1.08□□□□□ -2.58
SPT3P06844 snR50snR50 90 nt-1.08□□□□□ -2.58
SPT3P06844 snR55snR55 98 nt-1.09□□□□□ -2.58
SPT3P06844 YNL266WYNL266W 420 nt-1.09□□□□□ -2.58
SPT3P06844 RDS3YPR094W 324 nt-1.09□□□□□ -2.58
SPT3P06844 YGR146C-AYGR146C-A 162 nt-1.11□□□□□ -2.59
SPT3P06844 tP(UGG)QtP(UGG)Q 72 nt-1.11□□□□□ -2.59
SPT3P06844 PMP2YEL017C-A 132 nt-1.12□□□□□ -2.59
SPT3P06844 YOR329W-AYOR329W-A 210 nt-1.17□□□□□ -2.6
SPT3P06844 YNL097C-BYNL097C-B 123 nt-1.23□□□□□ -2.61
SPT3P06844 JLP2YMR132C 627 nt-1.24□□□□□ -2.61
SPT3P06844 YOL155W-AYOL155W-A 135 nt-1.25□□□□□ -2.61
SPT3P06844 tD(GUC)QtD(GUC)Q 75 nt-1.27□□□□□ -2.61
SPT3P06844 snR67snR67 82 nt-1.29□□□□□ -2.62
SPT3P06844 YLR286W-AYLR286W-A 135 nt-1.3□□□□□ -2.62
SPT3P06844 YOR302WYOR302W 78 nt-1.32□□□□□ -2.62
SPT3P06844 YBR178WYBR178W 375 nt-1.32□□□□□ -2.62
SPT3P06844 snR65snR65 100 nt-1.33□□□□□ -2.62
SPT3P06844 YPL152W-AYPL152W-A 99 nt-1.34□□□□□ -2.62
SPT3P06844 YHR175W-AYHR175W-A 150 nt-1.37□□□□□ -2.63
SPT3P06844 YNL205CYNL205C 423 nt-1.37□□□□□ -2.63
SPT3P06844 YDL159C-BYDL159C-B 177 nt-1.38□□□□□ -2.63
SPT3P06844 SKI7YOR076C 2244 nt-1.4□□□□□ -2.63
SPT3P06844 YNR077CYNR077C 255 nt-1.4□□□□□ -2.63
SPT3P06844 tY(GUA)QtY(GUA)Q 84 nt-1.41□□□□□ -2.64
SPT3P06844 snR48snR48 113 nt-1.41□□□□□ -2.64
SPT3P06844 snR52snR52 92 nt-1.41□□□□□ -2.64
SPT3P06844 YGL188C-AYGL188C-A 141 nt-1.46□□□□□ -2.64
SPT3P06844 tL(UAA)QtL(UAA)Q 85 nt-1.47□□□□□ -2.64
SPT3P06844 YLR342W-AYLR342W-A 174 nt-1.47□□□□□ -2.64
SPT3P06844 YOR102WYOR102W 351 nt-1.47□□□□□ -2.64
SPT3P06844 tR(ACG)Q2tR(ACG)Q2 74 nt-1.49□□□□□ -2.65
SPT3P06844 snR56snR56 88 nt-1.5□□□□□ -2.65
SPT3P06844 YHL015W-AYHL015W-A 84 nt-1.54□□□□□ -2.66
SPT3P06844 YLR299C-AYLR299C-A 93 nt-1.57□□□□□ -2.66
SPT3P06844 YML054C-AYML054C-A 159 nt-1.59□□□□□ -2.66
SPT3P06844 snR80snR80 171 nt-1.61□□□□□ -2.67
SPT3P06844 YBR196C-AYBR196C-A 150 nt-1.61□□□□□ -2.67
SPT3P06844 YOR231C-AYOR231C-A 201 nt-1.62□□□□□ -2.67
SPT3P06844 CDC65tQ(CUG)M 72 nt-1.67□□□□□ -2.68
SPT3P06844 snR77snR77 88 nt-1.72□□□□□ -2.68
SPT3P06844 YDR524W-CYDR524W-C 90 nt-1.74□□□□□ -2.69
SPT3P06844 snR81snR81 201 nt-1.78□□□□□ -2.69
SPT3P06844 YGR240C-AYGR240C-A 201 nt-1.78□□□□□ -2.69
SPT3P06844 YDR406W-AYDR406W-A 246 nt-1.79□□□□□ -2.7
SPT3P06844 YNL198CYNL198C 303 nt-1.81□□□□□ -2.7
SPT3P06844 YBR126W-BYBR126W-B 144 nt-1.82□□□□□ -2.7
SPT3P06844 YMR315W-AYMR315W-A 108 nt-1.83□□□□□ -2.7
SPT3P06844 YHR180C-BYHR180C-B 105 nt-1.85□□□□□ -2.71
SPT3P06844 YOR376W-AYOR376W-A 156 nt-1.89□□□□□ -2.71
SPT3P06844 SOM1YEL059C-A 225 nt-1.91□□□□□ -2.72
SPT3P06844 YBL053WYBL053W 375 nt-1.94□□□□□ -2.72
SPT3P06844 YJL150WYJL150W 303 nt-1.95□□□□□ -2.72
SPT3P06844 YOR309CYOR309C 381 nt-2.01□□□□□ -2.73
SPT3P06844 YCR095W-AYCR095W-A 159 nt-2.06□□□□□ -2.74
SPT3P06844 YKL106C-AYKL106C-A 120 nt-2.08□□□□□ -2.74
SPT3P06844 YOR316C-AYOR316C-A 210 nt-2.11□□□□□ -2.75
SPT3P06844 RPL41AYDL184C 78 nt-2.21□□□□□ -2.76
SPT3P06844 YBR296C-AYBR296C-A 120 nt-2.21□□□□□ -2.76
SPT3P06844 YMR046W-AYMR046W-A 129 nt-2.22□□□□□ -2.76
SPT3P06844 YBR109W-AYBR109W-A 225 nt-2.23□□□□□ -2.77
SPT3P06844 YGR151CYGR151C 336 nt-2.26□□□□□ -2.77
SPT3P06844 YOL083C-AYOL083C-A 141 nt-2.26□□□□□ -2.77
SPT3P06844 SPG3YDR504C 384 nt-2.31□□□□□ -2.78
SPT3P06844 YDR543CYDR543C 300 nt-2.33□□□□□ -2.78
SPT3P06844 YBL071C-BYBL071C-B 99 nt-2.35□□□□□ -2.79
SPT3P06844 snR38snR38 95 nt-2.38□□□□□ -2.79
SPT3P06844 YOL164W-AYOL164W-A 183 nt-2.41□□□□□ -2.8
SPT3P06844 YCL001W-BYCL001W-B 255 nt-2.44□□□□□ -2.8
SPT3P06844 snR47snR47 99 nt-2.49□□□□□ -2.81
SPT3P06844 YAL037C-AYAL037C-A 93 nt-2.51□□□□□ -2.81
SPT3P06844 tM(CAU)Q1tM(CAU)Q1 76 nt-2.53□□□□□ -2.81
SPT3P06844 Q0142Q0142 177 nt-2.53□□□□□ -2.81
SPT3P06844 YBL100W-CYBL100W-C 120 nt-2.55□□□□□ -2.82
SPT3P06844 YLR466C-BYLR466C-B 117 nt-2.56□□□□□ -2.82
SPT3P06844 snR6snR6 112 nt-2.64□□□□□ -2.83
SPT3P06844 YNL338WYNL338W 159 nt-2.64□□□□□ -2.83
SPT3P06844 YNL337WYNL337W 255 nt-2.75□□□□□ -2.85
SPT3P06844 snR73snR73 106 nt-2.76□□□□□ -2.85
SPT3P06844 YOR335W-AYOR335W-A 81 nt-2.78□□□□□ -2.85
SPT3P06844 tS(GCU)Q1tS(GCU)Q1 86 nt-2.79□□□□□ -2.86
SPT3P06844 YKL225WYKL225W 348 nt-2.8□□□□□ -2.86
SPT3P06844 RPL41BYDL133C-A 78 nt-2.82□□□□□ -2.86
SPT3P06844 YOL166W-AYOL166W-A 156 nt-2.82□□□□□ -2.86
SPT3P06844 YDL114W-AYDL114W-A 114 nt-2.91□□□□□ -2.88
SPT3P06844 YDR524C-AYDR524C-A 120 nt-2.93□□□□□ -2.88
SPT3P06844 tV(UAC)QtV(UAC)Q 76 nt-2.97□□□□□ -2.88
SPT3P06844 YGL041C-BYGL041C-B 183 nt-3.03□□□□□ -2.89
SPT3P06844 snR85snR85 171 nt-3.04□□□□□ -2.9
SPT3P06844 YDR034C-AYDR034C-A 177 nt-3.1□□□□□ -2.91
Retrieved 100 of 7,029 protein–RNA pairs in 899.4 ms