Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 AC142086.2-201ENST00000569753 217 ntBASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 KRT17P1-201ENST00000399211 1546 ntBASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 AC133041.1-202ENST00000642053 222 ntBASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV23-1A0A0A0MS06 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 AL138781.1-201ENST00000566567 1274 ntBASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV23-1A0A0A0MS06 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TRBV23-1A0A0A0MS06 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV23-1A0A0A0MS06 AL355802.2-201ENST00000402069 882 ntBASIC16.77■□□□□ 0.28
TRBV23-1A0A0A0MS06 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.77■□□□□ 0.28
TRBV23-1A0A0A0MS06 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.77■□□□□ 0.28
TRBV23-1A0A0A0MS06 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV23-1A0A0A0MS06 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.77■□□□□ 0.28
TRBV23-1A0A0A0MS06 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.77■□□□□ 0.28
TRBV23-1A0A0A0MS06 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.77■□□□□ 0.28
TRBV23-1A0A0A0MS06 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV23-1A0A0A0MS06 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV23-1A0A0A0MS06 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV23-1A0A0A0MS06 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV23-1A0A0A0MS06 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV23-1A0A0A0MS06 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.77■□□□□ 0.27
TRBV23-1A0A0A0MS06 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV23-1A0A0A0MS06 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.27
TRBV23-1A0A0A0MS06 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV23-1A0A0A0MS06 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.77■□□□□ 0.27
TRBV23-1A0A0A0MS06 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 AC069152.1-201ENST00000438030 544 ntBASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV23-1A0A0A0MS06 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms