Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
RAB40CQ96S21 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40CQ96S21 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40CQ96S21 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RAB40CQ96S21 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RAB40CQ96S21 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40CQ96S21 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40CQ96S21 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40CQ96S21 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40CQ96S21 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40CQ96S21 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40CQ96S21 WASH5P-204ENST00000632292 975 ntBASIC20.92■□□□□ 0.94
RAB40CQ96S21 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.92■□□□□ 0.94
RAB40CQ96S21 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40CQ96S21 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RAB40CQ96S21 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB40CQ96S21 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RAB40CQ96S21 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40CQ96S21 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40CQ96S21 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.9■□□□□ 0.94
RAB40CQ96S21 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB40CQ96S21 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB40CQ96S21 AC010864.1-201ENST00000609407 1511 ntBASIC20.89■□□□□ 0.94
RAB40CQ96S21 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.89■□□□□ 0.93
RAB40CQ96S21 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB40CQ96S21 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RAB40CQ96S21 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RAB40CQ96S21 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40CQ96S21 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40CQ96S21 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.88■□□□□ 0.93
RAB40CQ96S21 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB40CQ96S21 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB40CQ96S21 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40CQ96S21 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40CQ96S21 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40CQ96S21 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40CQ96S21 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40CQ96S21 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.87■□□□□ 0.93
RAB40CQ96S21 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.86■□□□□ 0.93
RAB40CQ96S21 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB40CQ96S21 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB40CQ96S21 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB40CQ96S21 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB40CQ96S21 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB40CQ96S21 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40CQ96S21 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RAB40CQ96S21 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.84■□□□□ 0.93
RAB40CQ96S21 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40CQ96S21 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB40CQ96S21 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RAB40CQ96S21 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB40CQ96S21 AP004833.2-201ENST00000532228 1454 ntBASIC20.82■□□□□ 0.92
RAB40CQ96S21 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.82■□□□□ 0.92
RAB40CQ96S21 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB40CQ96S21 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB40CQ96S21 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB40CQ96S21 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40CQ96S21 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB40CQ96S21 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40CQ96S21 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.81■□□□□ 0.92
RAB40CQ96S21 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RAB40CQ96S21 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RAB40CQ96S21 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB40CQ96S21 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB40CQ96S21 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40CQ96S21 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40CQ96S21 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RAB40CQ96S21 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40CQ96S21 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAB40CQ96S21 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.78■□□□□ 0.92
RAB40CQ96S21 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40CQ96S21 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.78■□□□□ 0.92
RAB40CQ96S21 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40CQ96S21 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40CQ96S21 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40CQ96S21 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAB40CQ96S21 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RAB40CQ96S21 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RAB40CQ96S21 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40CQ96S21 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40CQ96S21 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40CQ96S21 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40CQ96S21 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RAB40CQ96S21 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB40CQ96S21 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB40CQ96S21 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB40CQ96S21 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB40CQ96S21 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB40CQ96S21 AC135731.1-201ENST00000569415 2548 ntBASIC20.74■□□□□ 0.91
RAB40CQ96S21 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RAB40CQ96S21 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB40CQ96S21 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB40CQ96S21 LINC01003-201ENST00000564834 1764 ntBASIC20.72■□□□□ 0.91
RAB40CQ96S21 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB40CQ96S21 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40CQ96S21 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40CQ96S21 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAB40CQ96S21 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB40CQ96S21 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB40CQ96S21 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms