Protein–RNA interactions for Protein: Q8R2E1

Vmn1r38, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r38Q8R2E1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Vmn1r38Q8R2E1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Vmn1r38Q8R2E1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.39■■□□□ 1.17
Vmn1r38Q8R2E1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r38Q8R2E1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Vmn1r38Q8R2E1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r38Q8R2E1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r38Q8R2E1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vmn1r38Q8R2E1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Vmn1r38Q8R2E1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Vmn1r38Q8R2E1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Vmn1r38Q8R2E1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vmn1r38Q8R2E1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r38Q8R2E1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Vmn1r38Q8R2E1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r38Q8R2E1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r38Q8R2E1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.33■■□□□ 1.17
Vmn1r38Q8R2E1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vmn1r38Q8R2E1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vmn1r38Q8R2E1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Vmn1r38Q8R2E1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
Vmn1r38Q8R2E1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r38Q8R2E1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r38Q8R2E1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r38Q8R2E1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r38Q8R2E1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r38Q8R2E1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r38Q8R2E1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r38Q8R2E1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r38Q8R2E1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r38Q8R2E1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r38Q8R2E1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r38Q8R2E1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r38Q8R2E1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Vmn1r38Q8R2E1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r38Q8R2E1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Vmn1r38Q8R2E1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vmn1r38Q8R2E1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r38Q8R2E1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Vmn1r38Q8R2E1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Vmn1r38Q8R2E1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vmn1r38Q8R2E1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Vmn1r38Q8R2E1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.22■■□□□ 1.15
Vmn1r38Q8R2E1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r38Q8R2E1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Vmn1r38Q8R2E1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
Vmn1r38Q8R2E1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Vmn1r38Q8R2E1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r38Q8R2E1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r38Q8R2E1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r38Q8R2E1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r38Q8R2E1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Vmn1r38Q8R2E1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r38Q8R2E1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r38Q8R2E1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r38Q8R2E1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r38Q8R2E1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r38Q8R2E1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r38Q8R2E1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Vmn1r38Q8R2E1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r38Q8R2E1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r38Q8R2E1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.16■■□□□ 1.14
Vmn1r38Q8R2E1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r38Q8R2E1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r38Q8R2E1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
Vmn1r38Q8R2E1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Vmn1r38Q8R2E1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Vmn1r38Q8R2E1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Vmn1r38Q8R2E1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Vmn1r38Q8R2E1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Vmn1r38Q8R2E1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r38Q8R2E1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r38Q8R2E1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r38Q8R2E1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r38Q8R2E1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r38Q8R2E1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r38Q8R2E1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r38Q8R2E1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r38Q8R2E1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r38Q8R2E1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.11■■□□□ 1.13
Vmn1r38Q8R2E1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r38Q8R2E1 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.1■■□□□ 1.13
Vmn1r38Q8R2E1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r38Q8R2E1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Vmn1r38Q8R2E1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.09■■□□□ 1.13
Vmn1r38Q8R2E1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r38Q8R2E1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Vmn1r38Q8R2E1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Vmn1r38Q8R2E1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Vmn1r38Q8R2E1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vmn1r38Q8R2E1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vmn1r38Q8R2E1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.07■■□□□ 1.12
Vmn1r38Q8R2E1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Vmn1r38Q8R2E1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Vmn1r38Q8R2E1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.07■■□□□ 1.12
Vmn1r38Q8R2E1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Vmn1r38Q8R2E1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vmn1r38Q8R2E1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r38Q8R2E1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r38Q8R2E1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms