Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.55■■■□□ 2.64
Rab11fip3Q8CHD8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Rab11fip3Q8CHD8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rab11fip3Q8CHD8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rab11fip3Q8CHD8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Rab11fip3Q8CHD8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Rab11fip3Q8CHD8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Rab11fip3Q8CHD8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Rab11fip3Q8CHD8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Rab11fip3Q8CHD8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Rab11fip3Q8CHD8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Rab11fip3Q8CHD8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
Rab11fip3Q8CHD8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Rab11fip3Q8CHD8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC31.49■■■□□ 2.63
Rab11fip3Q8CHD8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.49■■■□□ 2.63
Rab11fip3Q8CHD8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31.49■■■□□ 2.63
Rab11fip3Q8CHD8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Rab11fip3Q8CHD8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Rab11fip3Q8CHD8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
Rab11fip3Q8CHD8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC31.47■■■□□ 2.63
Rab11fip3Q8CHD8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Rab11fip3Q8CHD8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Rab11fip3Q8CHD8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Rab11fip3Q8CHD8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Rab11fip3Q8CHD8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC31.44■■■□□ 2.62
Rab11fip3Q8CHD8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Rab11fip3Q8CHD8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31.43■■■□□ 2.62
Rab11fip3Q8CHD8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Rab11fip3Q8CHD8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Rab11fip3Q8CHD8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Rab11fip3Q8CHD8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31.38■■■□□ 2.61
Rab11fip3Q8CHD8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Rab11fip3Q8CHD8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Rab11fip3Q8CHD8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Rab11fip3Q8CHD8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC31.34■■■□□ 2.61
Rab11fip3Q8CHD8 Particl-201ENSMUST00000205370 1560 ntBASIC31.33■■■□□ 2.61
Rab11fip3Q8CHD8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rab11fip3Q8CHD8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rab11fip3Q8CHD8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Rab11fip3Q8CHD8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
Rab11fip3Q8CHD8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
Rab11fip3Q8CHD8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Rab11fip3Q8CHD8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rab11fip3Q8CHD8 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.28■■■□□ 2.6
Rab11fip3Q8CHD8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rab11fip3Q8CHD8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Rab11fip3Q8CHD8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Rab11fip3Q8CHD8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rab11fip3Q8CHD8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Rab11fip3Q8CHD8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.24■■■□□ 2.59
Rab11fip3Q8CHD8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rab11fip3Q8CHD8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rab11fip3Q8CHD8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rab11fip3Q8CHD8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Rab11fip3Q8CHD8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
Rab11fip3Q8CHD8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Rab11fip3Q8CHD8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Rab11fip3Q8CHD8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC31.2■■■□□ 2.59
Rab11fip3Q8CHD8 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.2■■■□□ 2.58
Rab11fip3Q8CHD8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Rab11fip3Q8CHD8 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.19■■■□□ 2.58
Rab11fip3Q8CHD8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Rab11fip3Q8CHD8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Rab11fip3Q8CHD8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rab11fip3Q8CHD8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rab11fip3Q8CHD8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.17■■■□□ 2.58
Rab11fip3Q8CHD8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.15■■■□□ 2.58
Rab11fip3Q8CHD8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.15■■■□□ 2.58
Rab11fip3Q8CHD8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
Rab11fip3Q8CHD8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
Rab11fip3Q8CHD8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.13■■■□□ 2.57
Rab11fip3Q8CHD8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Rab11fip3Q8CHD8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rab11fip3Q8CHD8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
Rab11fip3Q8CHD8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Rab11fip3Q8CHD8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rab11fip3Q8CHD8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rab11fip3Q8CHD8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Rab11fip3Q8CHD8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.08■■■□□ 2.57
Rab11fip3Q8CHD8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rab11fip3Q8CHD8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Rab11fip3Q8CHD8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Rab11fip3Q8CHD8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Rab11fip3Q8CHD8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC31.06■■■□□ 2.56
Rab11fip3Q8CHD8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
Rab11fip3Q8CHD8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Rab11fip3Q8CHD8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rab11fip3Q8CHD8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.03■■■□□ 2.56
Rab11fip3Q8CHD8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rab11fip3Q8CHD8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC31.02■■■□□ 2.56
Rab11fip3Q8CHD8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31■■■□□ 2.55
Rab11fip3Q8CHD8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
Rab11fip3Q8CHD8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
Rab11fip3Q8CHD8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.99■■■□□ 2.55
Rab11fip3Q8CHD8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Rab11fip3Q8CHD8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.99■■■□□ 2.55
Rab11fip3Q8CHD8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Rab11fip3Q8CHD8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Rab11fip3Q8CHD8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Rab11fip3Q8CHD8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms