Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vps9d1Q8C190 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vps9d1Q8C190 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vps9d1Q8C190 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Vps9d1Q8C190 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Vps9d1Q8C190 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vps9d1Q8C190 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.18■■□□□ 1.14
Vps9d1Q8C190 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vps9d1Q8C190 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Vps9d1Q8C190 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.17■■□□□ 1.14
Vps9d1Q8C190 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vps9d1Q8C190 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Vps9d1Q8C190 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vps9d1Q8C190 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vps9d1Q8C190 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vps9d1Q8C190 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vps9d1Q8C190 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vps9d1Q8C190 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Vps9d1Q8C190 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Vps9d1Q8C190 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vps9d1Q8C190 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Vps9d1Q8C190 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vps9d1Q8C190 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vps9d1Q8C190 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vps9d1Q8C190 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vps9d1Q8C190 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Vps9d1Q8C190 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Vps9d1Q8C190 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.1■■□□□ 1.13
Vps9d1Q8C190 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.1■■□□□ 1.13
Vps9d1Q8C190 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Vps9d1Q8C190 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vps9d1Q8C190 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vps9d1Q8C190 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vps9d1Q8C190 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vps9d1Q8C190 Gm45855-201ENSMUST00000212546 880 ntBASIC22.06■■□□□ 1.12
Vps9d1Q8C190 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.06■■□□□ 1.12
Vps9d1Q8C190 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Vps9d1Q8C190 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vps9d1Q8C190 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.05■■□□□ 1.12
Vps9d1Q8C190 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vps9d1Q8C190 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Vps9d1Q8C190 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.03■■□□□ 1.12
Vps9d1Q8C190 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps9d1Q8C190 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vps9d1Q8C190 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
Vps9d1Q8C190 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Vps9d1Q8C190 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Vps9d1Q8C190 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vps9d1Q8C190 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vps9d1Q8C190 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22■■□□□ 1.11
Vps9d1Q8C190 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vps9d1Q8C190 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vps9d1Q8C190 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps9d1Q8C190 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps9d1Q8C190 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vps9d1Q8C190 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.97■■□□□ 1.11
Vps9d1Q8C190 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps9d1Q8C190 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps9d1Q8C190 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps9d1Q8C190 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
Vps9d1Q8C190 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Vps9d1Q8C190 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
Vps9d1Q8C190 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps9d1Q8C190 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.96■■□□□ 1.11
Vps9d1Q8C190 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps9d1Q8C190 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Vps9d1Q8C190 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps9d1Q8C190 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps9d1Q8C190 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps9d1Q8C190 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Vps9d1Q8C190 Gm9397-201ENSMUST00000200125 605 ntBASIC21.95■■□□□ 1.1
Vps9d1Q8C190 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps9d1Q8C190 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Vps9d1Q8C190 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps9d1Q8C190 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps9d1Q8C190 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps9d1Q8C190 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.94■■□□□ 1.1
Vps9d1Q8C190 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps9d1Q8C190 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.93■■□□□ 1.1
Vps9d1Q8C190 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps9d1Q8C190 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps9d1Q8C190 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Vps9d1Q8C190 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps9d1Q8C190 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps9d1Q8C190 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps9d1Q8C190 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps9d1Q8C190 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.89■■□□□ 1.09
Vps9d1Q8C190 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Vps9d1Q8C190 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps9d1Q8C190 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps9d1Q8C190 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps9d1Q8C190 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Vps9d1Q8C190 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps9d1Q8C190 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps9d1Q8C190 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Vps9d1Q8C190 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.87■■□□□ 1.09
Vps9d1Q8C190 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Vps9d1Q8C190 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Vps9d1Q8C190 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps9d1Q8C190 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms