Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm25239-201ENSMUST00000174915 86 ntBASIC32.85■■■□□ 2.85
Vps9d1Q8C190 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Vps9d1Q8C190 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Vps9d1Q8C190 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Vps9d1Q8C190 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Vps9d1Q8C190 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Vps9d1Q8C190 Psd-208ENSMUST00000224556 2034 ntBASIC29.88■■■□□ 2.37
Vps9d1Q8C190 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Vps9d1Q8C190 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Vps9d1Q8C190 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Vps9d1Q8C190 Gm15042-201ENSMUST00000120212 883 ntBASIC29.04■■■□□ 2.24
Vps9d1Q8C190 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Vps9d1Q8C190 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Vps9d1Q8C190 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Vps9d1Q8C190 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.58■■■□□ 2.17
Vps9d1Q8C190 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Vps9d1Q8C190 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Vps9d1Q8C190 Gm24109-201ENSMUST00000175489 103 ntBASIC28.47■■■□□ 2.15
Vps9d1Q8C190 Gm15045-201ENSMUST00000117359 883 ntBASIC28.44■■■□□ 2.14
Vps9d1Q8C190 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Vps9d1Q8C190 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Vps9d1Q8C190 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Vps9d1Q8C190 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Vps9d1Q8C190 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Vps9d1Q8C190 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Vps9d1Q8C190 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Vps9d1Q8C190 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Vps9d1Q8C190 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
Vps9d1Q8C190 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Vps9d1Q8C190 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Vps9d1Q8C190 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.7■■■□□ 2.02
Vps9d1Q8C190 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Vps9d1Q8C190 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Vps9d1Q8C190 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Vps9d1Q8C190 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.55■■■□□ 2
Vps9d1Q8C190 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.55■■■□□ 2
Vps9d1Q8C190 Gm23366-201ENSMUST00000175022 89 ntBASIC27.51■■□□□ 1.99
Vps9d1Q8C190 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Vps9d1Q8C190 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Vps9d1Q8C190 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Vps9d1Q8C190 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.34■■□□□ 1.97
Vps9d1Q8C190 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Vps9d1Q8C190 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.14■■□□□ 1.94
Vps9d1Q8C190 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Vps9d1Q8C190 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Vps9d1Q8C190 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.05■■□□□ 1.92
Vps9d1Q8C190 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Vps9d1Q8C190 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Vps9d1Q8C190 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Vps9d1Q8C190 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.85■■□□□ 1.89
Vps9d1Q8C190 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Vps9d1Q8C190 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Vps9d1Q8C190 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.63■■□□□ 1.85
Vps9d1Q8C190 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Vps9d1Q8C190 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.55■■□□□ 1.84
Vps9d1Q8C190 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Vps9d1Q8C190 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Vps9d1Q8C190 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Vps9d1Q8C190 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Vps9d1Q8C190 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Vps9d1Q8C190 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.41■■□□□ 1.82
Vps9d1Q8C190 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Vps9d1Q8C190 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.4■■□□□ 1.82
Vps9d1Q8C190 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
Vps9d1Q8C190 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Vps9d1Q8C190 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
Vps9d1Q8C190 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Vps9d1Q8C190 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Vps9d1Q8C190 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Vps9d1Q8C190 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Vps9d1Q8C190 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Vps9d1Q8C190 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Vps9d1Q8C190 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Vps9d1Q8C190 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Vps9d1Q8C190 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Vps9d1Q8C190 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Vps9d1Q8C190 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Vps9d1Q8C190 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Vps9d1Q8C190 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.98■■□□□ 1.75
Vps9d1Q8C190 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Vps9d1Q8C190 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Vps9d1Q8C190 Gm25238-201ENSMUST00000174914 89 ntBASIC25.94■■□□□ 1.74
Vps9d1Q8C190 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.93■■□□□ 1.74
Vps9d1Q8C190 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Vps9d1Q8C190 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Vps9d1Q8C190 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Vps9d1Q8C190 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.81■■□□□ 1.72
Vps9d1Q8C190 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Vps9d1Q8C190 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Vps9d1Q8C190 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Vps9d1Q8C190 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.71■■□□□ 1.71
Vps9d1Q8C190 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Vps9d1Q8C190 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Vps9d1Q8C190 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Vps9d1Q8C190 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Vps9d1Q8C190 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Vps9d1Q8C190 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Vps9d1Q8C190 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Vps9d1Q8C190 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Vps9d1Q8C190 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms