Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf38Q8BI21 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf38Q8BI21 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
Rnf38Q8BI21 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf38Q8BI21 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.09■■□□□ 1.29
Rnf38Q8BI21 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf38Q8BI21 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Rnf38Q8BI21 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Rnf38Q8BI21 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.04■■□□□ 1.28
Rnf38Q8BI21 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf38Q8BI21 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf38Q8BI21 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf38Q8BI21 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf38Q8BI21 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf38Q8BI21 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf38Q8BI21 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23■■□□□ 1.27
Rnf38Q8BI21 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.99■■□□□ 1.27
Rnf38Q8BI21 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Rnf38Q8BI21 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.98■■□□□ 1.27
Rnf38Q8BI21 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf38Q8BI21 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf38Q8BI21 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf38Q8BI21 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf38Q8BI21 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf38Q8BI21 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf38Q8BI21 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf38Q8BI21 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf38Q8BI21 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.94■■□□□ 1.26
Rnf38Q8BI21 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf38Q8BI21 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf38Q8BI21 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Rnf38Q8BI21 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.93■■□□□ 1.26
Rnf38Q8BI21 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf38Q8BI21 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.92■■□□□ 1.26
Rnf38Q8BI21 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf38Q8BI21 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Rnf38Q8BI21 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf38Q8BI21 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf38Q8BI21 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf38Q8BI21 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf38Q8BI21 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf38Q8BI21 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf38Q8BI21 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf38Q8BI21 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf38Q8BI21 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.88■■□□□ 1.25
Rnf38Q8BI21 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf38Q8BI21 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rnf38Q8BI21 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.87■■□□□ 1.25
Rnf38Q8BI21 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rnf38Q8BI21 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rnf38Q8BI21 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rnf38Q8BI21 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Rnf38Q8BI21 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rnf38Q8BI21 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
Rnf38Q8BI21 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf38Q8BI21 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.83■■□□□ 1.25
Rnf38Q8BI21 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rnf38Q8BI21 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.83■■□□□ 1.25
Rnf38Q8BI21 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf38Q8BI21 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
Rnf38Q8BI21 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf38Q8BI21 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf38Q8BI21 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf38Q8BI21 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf38Q8BI21 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf38Q8BI21 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf38Q8BI21 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf38Q8BI21 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Rnf38Q8BI21 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf38Q8BI21 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf38Q8BI21 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf38Q8BI21 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Rnf38Q8BI21 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf38Q8BI21 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf38Q8BI21 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf38Q8BI21 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.74■■□□□ 1.23
Rnf38Q8BI21 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf38Q8BI21 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf38Q8BI21 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf38Q8BI21 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf38Q8BI21 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Rnf38Q8BI21 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.72■■□□□ 1.23
Rnf38Q8BI21 Gm9397-201ENSMUST00000200125 605 ntBASIC22.72■■□□□ 1.23
Rnf38Q8BI21 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.72■■□□□ 1.23
Rnf38Q8BI21 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf38Q8BI21 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf38Q8BI21 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf38Q8BI21 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf38Q8BI21 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Rnf38Q8BI21 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf38Q8BI21 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf38Q8BI21 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.71■■□□□ 1.23
Rnf38Q8BI21 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms