Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf38Q8BI21 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf38Q8BI21 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
Rnf38Q8BI21 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf38Q8BI21 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.09■■□□□ 1.29
Rnf38Q8BI21 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf38Q8BI21 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf38Q8BI21 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Rnf38Q8BI21 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Rnf38Q8BI21 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.04■■□□□ 1.28
Rnf38Q8BI21 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf38Q8BI21 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf38Q8BI21 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf38Q8BI21 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf38Q8BI21 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf38Q8BI21 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf38Q8BI21 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23■■□□□ 1.27
Rnf38Q8BI21 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.99■■□□□ 1.27
Rnf38Q8BI21 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Rnf38Q8BI21 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.98■■□□□ 1.27
Rnf38Q8BI21 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf38Q8BI21 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rnf38Q8BI21 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf38Q8BI21 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf38Q8BI21 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf38Q8BI21 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf38Q8BI21 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf38Q8BI21 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf38Q8BI21 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.94■■□□□ 1.26
Rnf38Q8BI21 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf38Q8BI21 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf38Q8BI21 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Rnf38Q8BI21 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.93■■□□□ 1.26
Rnf38Q8BI21 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rnf38Q8BI21 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.92■■□□□ 1.26
Rnf38Q8BI21 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf38Q8BI21 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Rnf38Q8BI21 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf38Q8BI21 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf38Q8BI21 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf38Q8BI21 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf38Q8BI21 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf38Q8BI21 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf38Q8BI21 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf38Q8BI21 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf38Q8BI21 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.88■■□□□ 1.25
Rnf38Q8BI21 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf38Q8BI21 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rnf38Q8BI21 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.87■■□□□ 1.25
Rnf38Q8BI21 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rnf38Q8BI21 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rnf38Q8BI21 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rnf38Q8BI21 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Rnf38Q8BI21 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rnf38Q8BI21 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
Rnf38Q8BI21 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf38Q8BI21 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.83■■□□□ 1.25
Rnf38Q8BI21 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rnf38Q8BI21 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.83■■□□□ 1.25
Rnf38Q8BI21 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf38Q8BI21 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
Rnf38Q8BI21 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf38Q8BI21 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf38Q8BI21 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf38Q8BI21 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf38Q8BI21 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf38Q8BI21 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf38Q8BI21 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf38Q8BI21 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Rnf38Q8BI21 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf38Q8BI21 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf38Q8BI21 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf38Q8BI21 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Rnf38Q8BI21 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf38Q8BI21 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf38Q8BI21 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf38Q8BI21 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.74■■□□□ 1.23
Rnf38Q8BI21 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf38Q8BI21 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf38Q8BI21 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf38Q8BI21 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf38Q8BI21 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Rnf38Q8BI21 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.72■■□□□ 1.23
Rnf38Q8BI21 Gm9397-201ENSMUST00000200125 605 ntBASIC22.72■■□□□ 1.23
Rnf38Q8BI21 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.72■■□□□ 1.23
Rnf38Q8BI21 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf38Q8BI21 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf38Q8BI21 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf38Q8BI21 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf38Q8BI21 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Rnf38Q8BI21 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf38Q8BI21 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf38Q8BI21 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.71■■□□□ 1.23
Rnf38Q8BI21 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms