Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Vrk1Q80X41 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Vrk1Q80X41 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Vrk1Q80X41 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Vrk1Q80X41 Gm30023-201ENSMUST00000197970 889 ntBASIC22.93■■□□□ 1.26
Vrk1Q80X41 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Vrk1Q80X41 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Vrk1Q80X41 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Vrk1Q80X41 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vrk1Q80X41 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vrk1Q80X41 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.91■■□□□ 1.26
Vrk1Q80X41 Gm11175-201ENSMUST00000116172 543 ntBASIC22.9■■□□□ 1.26
Vrk1Q80X41 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Vrk1Q80X41 Mir6538-201ENSMUST00000183713 110 ntBASIC22.9■■□□□ 1.26
Vrk1Q80X41 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Vrk1Q80X41 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Vrk1Q80X41 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Vrk1Q80X41 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Vrk1Q80X41 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Vrk1Q80X41 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Vrk1Q80X41 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Vrk1Q80X41 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Vrk1Q80X41 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.87■■□□□ 1.25
Vrk1Q80X41 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Vrk1Q80X41 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Vrk1Q80X41 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.87■■□□□ 1.25
Vrk1Q80X41 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Vrk1Q80X41 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.86■■□□□ 1.25
Vrk1Q80X41 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Vrk1Q80X41 Particl-201ENSMUST00000205370 1560 ntBASIC22.84■■□□□ 1.25
Vrk1Q80X41 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Vrk1Q80X41 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Vrk1Q80X41 Gm6311-201ENSMUST00000073790 878 ntBASIC22.83■■□□□ 1.25
Vrk1Q80X41 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Vrk1Q80X41 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.82■■□□□ 1.24
Vrk1Q80X41 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.82■■□□□ 1.24
Vrk1Q80X41 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.81■■□□□ 1.24
Vrk1Q80X41 Zxda-201ENSMUST00000117281 2621 ntBASIC22.81■■□□□ 1.24
Vrk1Q80X41 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Vrk1Q80X41 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Vrk1Q80X41 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Vrk1Q80X41 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Vrk1Q80X41 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Vrk1Q80X41 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Vrk1Q80X41 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Vrk1Q80X41 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Vrk1Q80X41 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Vrk1Q80X41 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Vrk1Q80X41 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vrk1Q80X41 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vrk1Q80X41 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Vrk1Q80X41 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Vrk1Q80X41 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.75■■□□□ 1.23
Vrk1Q80X41 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.75■■□□□ 1.23
Vrk1Q80X41 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vrk1Q80X41 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vrk1Q80X41 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vrk1Q80X41 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vrk1Q80X41 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vrk1Q80X41 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Vrk1Q80X41 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Vrk1Q80X41 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Vrk1Q80X41 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.71■■□□□ 1.23
Vrk1Q80X41 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Vrk1Q80X41 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Vrk1Q80X41 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Vrk1Q80X41 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.7■■□□□ 1.22
Vrk1Q80X41 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Vrk1Q80X41 Cap2-205ENSMUST00000225824 1634 ntBASIC22.68■■□□□ 1.22
Vrk1Q80X41 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Vrk1Q80X41 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Vrk1Q80X41 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.68■■□□□ 1.22
Vrk1Q80X41 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Vrk1Q80X41 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Vrk1Q80X41 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Vrk1Q80X41 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Vrk1Q80X41 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vrk1Q80X41 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vrk1Q80X41 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Vrk1Q80X41 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vrk1Q80X41 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Vrk1Q80X41 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Vrk1Q80X41 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Vrk1Q80X41 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Vrk1Q80X41 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Vrk1Q80X41 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Vrk1Q80X41 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Vrk1Q80X41 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Vrk1Q80X41 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Vrk1Q80X41 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vrk1Q80X41 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vrk1Q80X41 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vrk1Q80X41 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Vrk1Q80X41 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Vrk1Q80X41 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.59■■□□□ 1.21
Vrk1Q80X41 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Vrk1Q80X41 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Vrk1Q80X41 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Vrk1Q80X41 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Vrk1Q80X41 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 297 ms