Protein–RNA interactions for Protein: Q08723

RPN8, 26S proteasome regulatory subunit RPN8, yeastyeast

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN8Q08723 YRF1-2YER190W 5046 nt8.44□□□□□ -1.06
RPN8Q08723 DPL1YDR294C 1770 nt8.43□□□□□ -1.06
RPN8Q08723 HBS1YKR084C 1836 nt8.43□□□□□ -1.06
RPN8Q08723 ABZ2YMR289W 1125 nt8.43□□□□□ -1.06
RPN8Q08723 FIT1YDR534C 1587 nt8.43□□□□□ -1.06
RPN8Q08723 UFD1YGR048W 1086 nt8.42□□□□□ -1.06
RPN8Q08723 THP3YPR045C 1413 nt8.42□□□□□ -1.06
RPN8Q08723 ITR2YOL103W 1830 nt8.42□□□□□ -1.06
RPN8Q08723 DUR3YHL016C 2208 nt8.41□□□□□ -1.06
RPN8Q08723 SWM1YDR260C 513 nt8.41□□□□□ -1.06
RPN8Q08723 ADE8YDR408C 645 nt8.41□□□□□ -1.06
RPN8Q08723 FLX1YIL134W 936 nt8.41□□□□□ -1.06
RPN8Q08723 TVP23YDR084C 600 nt8.4□□□□□ -1.06
RPN8Q08723 BUD20YLR074C 501 nt8.4□□□□□ -1.06
RPN8Q08723 ASP3-1YLR155C 1089 nt8.4□□□□□ -1.06
RPN8Q08723 ASP3-2YLR157C 1089 nt8.4□□□□□ -1.06
RPN8Q08723 ASP3-3YLR158C 1089 nt8.4□□□□□ -1.06
RPN8Q08723 ASP3-4YLR160C 1089 nt8.4□□□□□ -1.06
RPN8Q08723 TAT2YOL020W 1779 nt8.4□□□□□ -1.07
RPN8Q08723 YLR046CYLR046C 813 nt8.39□□□□□ -1.07
RPN8Q08723 RPC31YNL151C 756 nt8.39□□□□□ -1.07
RPN8Q08723 CYC3YAL039C 810 nt8.38□□□□□ -1.07
RPN8Q08723 LEU4YNL104C 1860 nt8.38□□□□□ -1.07
RPN8Q08723 DUS3YLR401C 2007 nt8.36□□□□□ -1.07
RPN8Q08723 YFR036W-AYFR036W-A 651 nt8.35□□□□□ -1.07
RPN8Q08723 HTS1YPR033C 1641 nt8.35□□□□□ -1.07
RPN8Q08723 LPD1YFL018C 1500 nt8.34□□□□□ -1.07
RPN8Q08723 NPP2YEL016C 1482 nt8.34□□□□□ -1.07
RPN8Q08723 INH1YDL181W 258 nt8.34□□□□□ -1.07
RPN8Q08723 NAS2YIL007C 663 nt8.34□□□□□ -1.07
RPN8Q08723 CDD1YLR245C 429 nt8.34□□□□□ -1.07
RPN8Q08723 VMA11YPL234C 495 nt8.34□□□□□ -1.07
RPN8Q08723 SER2YGR208W 930 nt8.33□□□□□ -1.08
RPN8Q08723 ENT4YLL038C 744 nt8.33□□□□□ -1.08
RPN8Q08723 LYS20YDL182W 1287 nt8.32□□□□□ -1.08
RPN8Q08723 RPL12BYDR418W 498 nt8.32□□□□□ -1.08
RPN8Q08723 SPE2YOL052C 1191 nt8.32□□□□□ -1.08
RPN8Q08723 ENO2YHR174W 1314 nt8.31□□□□□ -1.08
RPN8Q08723 ERG13YML126C 1476 nt8.31□□□□□ -1.08
RPN8Q08723 YOR343CYOR343C 327 nt8.3□□□□□ -1.08
RPN8Q08723 ALR1YOL130W 2580 nt8.3□□□□□ -1.08
RPN8Q08723 KRR1YCL059C 951 nt8.29□□□□□ -1.08
RPN8Q08723 MOB1YIL106W 945 nt8.29□□□□□ -1.08
RPN8Q08723 SRP102YKL154W 735 nt8.28□□□□□ -1.08
RPN8Q08723 SNX3YOR357C 489 nt8.28□□□□□ -1.08
RPN8Q08723 AMF1YOR378W 1548 nt8.28□□□□□ -1.08
RPN8Q08723 RSC4YKR008W 1878 nt8.28□□□□□ -1.08
RPN8Q08723 HXT11YOL156W 1704 nt8.27□□□□□ -1.09
RPN8Q08723 ADH3YMR083W 1128 nt8.27□□□□□ -1.09
RPN8Q08723 FRA1YLL029W 2250 nt8.27□□□□□ -1.09
RPN8Q08723 TRP2YER090W 1524 nt8.26□□□□□ -1.09
RPN8Q08723 tE(CUC)DtE(CUC)D 72 nt8.26□□□□□ -1.09
RPN8Q08723 tE(CUC)ItE(CUC)I 72 nt8.26□□□□□ -1.09
RPN8Q08723 PHB2YGR231C 933 nt8.26□□□□□ -1.09
RPN8Q08723 LEU2YCL018W 1095 nt8.26□□□□□ -1.09
RPN8Q08723 YDR455CYDR455C 309 nt8.25□□□□□ -1.09
RPN8Q08723 HRA1HRA1 564 nt8.25□□□□□ -1.09
RPN8Q08723 ORT1YOR130C 879 nt8.25□□□□□ -1.09
RPN8Q08723 YAL016C-AYAL016C-A 315 nt8.24□□□□□ -1.09
RPN8Q08723 OPI3YJR073C 621 nt8.23□□□□□ -1.09
RPN8Q08723 PAU21YOR394W 495 nt8.22□□□□□ -1.09
RPN8Q08723 PAU22YPL282C 495 nt8.22□□□□□ -1.09
RPN8Q08723 snR4snR4 186 nt8.22□□□□□ -1.09
RPN8Q08723 ENO1YGR254W 1314 nt8.22□□□□□ -1.09
RPN8Q08723 THI6YPL214C 1623 nt8.21□□□□□ -1.09
RPN8Q08723 SRM1YGL097W 1449 nt8.21□□□□□ -1.09
RPN8Q08723 TPC1YGR096W 945 nt8.2□□□□□ -1.1
RPN8Q08723 YKR012CYKR012C 378 nt8.2□□□□□ -1.1
RPN8Q08723 YNR064CYNR064C 873 nt8.2□□□□□ -1.1
RPN8Q08723 TPN1YGL186C 1740 nt8.2□□□□□ -1.1
RPN8Q08723 SAC7YDR389W 1965 nt8.19□□□□□ -1.1
RPN8Q08723 ADE16YLR028C 1776 nt8.18□□□□□ -1.1
RPN8Q08723 YOR268CYOR268C 399 nt8.18□□□□□ -1.1
RPN8Q08723 YDR467CYDR467C 327 nt8.17□□□□□ -1.1
RPN8Q08723 GRH1YDR517W 1119 nt8.17□□□□□ -1.1
RPN8Q08723 SDS24YBR214W 1584 nt8.17□□□□□ -1.1
RPN8Q08723 YGR210CYGR210C 1236 nt8.16□□□□□ -1.1
RPN8Q08723 ERO1YML130C 1692 nt8.16□□□□□ -1.1
RPN8Q08723 TOM71YHR117W 1920 nt8.15□□□□□ -1.1
RPN8Q08723 FTH1YBR207W 1398 nt8.15□□□□□ -1.1
RPN8Q08723 YNL190WYNL190W 615 nt8.15□□□□□ -1.1
RPN8Q08723 YLR280CYLR280C 351 nt8.14□□□□□ -1.11
RPN8Q08723 YRF1-3YGR296W 5580 nt8.14□□□□□ -1.11
RPN8Q08723 YRF1-6YNL339C 5580 nt8.14□□□□□ -1.11
RPN8Q08723 YRF1-7YPL283C 5580 nt8.14□□□□□ -1.11
RPN8Q08723 LAS17YOR181W 1902 nt8.13□□□□□ -1.11
RPN8Q08723 MRP1YDR347W 966 nt8.13□□□□□ -1.11
RPN8Q08723 NSG2YNL156C 900 nt8.13□□□□□ -1.11
RPN8Q08723 snR31snR31 225 nt8.13□□□□□ -1.11
RPN8Q08723 NAM8YHR086W 1572 nt8.13□□□□□ -1.11
RPN8Q08723 MET30YIL046W 1923 nt8.13□□□□□ -1.11
RPN8Q08723 PFS2YNL317W 1398 nt8.12□□□□□ -1.11
RPN8Q08723 KEL3YPL263C 1956 nt8.12□□□□□ -1.11
RPN8Q08723 YLR072WYLR072W 2082 nt8.12□□□□□ -1.11
RPN8Q08723 EMC3YKL207W 762 nt8.11□□□□□ -1.11
RPN8Q08723 YPL108WYPL108W 507 nt8.11□□□□□ -1.11
RPN8Q08723 FCY1YPR062W 477 nt8.11□□□□□ -1.11
RPN8Q08723 YMR265CYMR265C 1386 nt8.1□□□□□ -1.11
RPN8Q08723 TGA1tA(UGC)A 73 nt8.1□□□□□ -1.11
RPN8Q08723 tA(UGC)EtA(UGC)E 73 nt8.1□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 27 ms