Protein–RNA interactions for Protein: Q03785

VHS1, Serine/threonine-protein kinase VHS1, yeastyeast

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VHS1Q03785 tA(AGC)DtA(AGC)D 73 nt8.17□□□□□ -1.1
VHS1Q03785 tA(AGC)FtA(AGC)F 73 nt8.17□□□□□ -1.1
VHS1Q03785 tA(AGC)GtA(AGC)G 73 nt8.17□□□□□ -1.1
VHS1Q03785 tA(AGC)HtA(AGC)H 73 nt8.17□□□□□ -1.1
VHS1Q03785 tA(AGC)JtA(AGC)J 73 nt8.17□□□□□ -1.1
VHS1Q03785 tA(AGC)K1tA(AGC)K1 73 nt8.17□□□□□ -1.1
VHS1Q03785 tA(AGC)K2tA(AGC)K2 73 nt8.17□□□□□ -1.1
VHS1Q03785 tA(AGC)LtA(AGC)L 73 nt8.17□□□□□ -1.1
VHS1Q03785 tA(AGC)M1tA(AGC)M1 73 nt8.17□□□□□ -1.1
VHS1Q03785 tA(AGC)M2tA(AGC)M2 73 nt8.17□□□□□ -1.1
VHS1Q03785 tA(AGC)PtA(AGC)P 73 nt8.17□□□□□ -1.1
VHS1Q03785 SWM1YDR260C 513 nt8.17□□□□□ -1.1
VHS1Q03785 MDM35YKL053C-A 261 nt8.17□□□□□ -1.1
VHS1Q03785 YKR012CYKR012C 378 nt8.17□□□□□ -1.1
VHS1Q03785 THP3YPR045C 1413 nt8.17□□□□□ -1.1
VHS1Q03785 BSP1YPR171W 1731 nt8.16□□□□□ -1.1
VHS1Q03785 YCR025CYCR025C 411 nt8.15□□□□□ -1.1
VHS1Q03785 RIM2YBR192W 1134 nt8.15□□□□□ -1.1
VHS1Q03785 SRP54YPR088C 1626 nt8.14□□□□□ -1.11
VHS1Q03785 MDL2YPL270W 2322 nt8.14□□□□□ -1.11
VHS1Q03785 BUD20YLR074C 501 nt8.14□□□□□ -1.11
VHS1Q03785 KGD2YDR148C 1392 nt8.13□□□□□ -1.11
VHS1Q03785 FSH2YMR222C 672 nt8.13□□□□□ -1.11
VHS1Q03785 FRE6YLL051C 2139 nt8.12□□□□□ -1.11
VHS1Q03785 MOB1YIL106W 945 nt8.12□□□□□ -1.11
VHS1Q03785 HXT10YFL011W 1641 nt8.11□□□□□ -1.11
VHS1Q03785 REX2YLR059C 810 nt8.11□□□□□ -1.11
VHS1Q03785 DPL1YDR294C 1770 nt8.11□□□□□ -1.11
VHS1Q03785 ADH3YMR083W 1128 nt8.1□□□□□ -1.11
VHS1Q03785 LYS20YDL182W 1287 nt8.09□□□□□ -1.11
VHS1Q03785 SAN1YDR143C 1833 nt8.08□□□□□ -1.12
VHS1Q03785 PHB2YGR231C 933 nt8.08□□□□□ -1.12
VHS1Q03785 SBP1YHL034C 885 nt8.08□□□□□ -1.12
VHS1Q03785 LEU4YNL104C 1860 nt8.07□□□□□ -1.12
VHS1Q03785 YDR467CYDR467C 327 nt8.07□□□□□ -1.12
VHS1Q03785 FLX1YIL134W 936 nt8.07□□□□□ -1.12
VHS1Q03785 YMR007WYMR007W 381 nt8.06□□□□□ -1.12
VHS1Q03785 MEX67YPL169C 1800 nt8.06□□□□□ -1.12
VHS1Q03785 SDS24YBR214W 1584 nt8.05□□□□□ -1.12
VHS1Q03785 NBA1YOL070C 1506 nt8.05□□□□□ -1.12
VHS1Q03785 INH1YDL181W 258 nt8.05□□□□□ -1.12
VHS1Q03785 TPN1YGL186C 1740 nt8.05□□□□□ -1.12
VHS1Q03785 PTC6YCR079W 1329 nt8.04□□□□□ -1.12
VHS1Q03785 ENO1YGR254W 1314 nt8.04□□□□□ -1.12
VHS1Q03785 YPT11YNL304W 1254 nt8.04□□□□□ -1.12
VHS1Q03785 GAS1YMR307W 1680 nt8.04□□□□□ -1.12
VHS1Q03785 VBA3YCL069W 1377 nt8.02□□□□□ -1.13
VHS1Q03785 CYC3YAL039C 810 nt8.02□□□□□ -1.13
VHS1Q03785 GPM1YKL152C 744 nt8.02□□□□□ -1.13
VHS1Q03785 ALR1YOL130W 2580 nt8.02□□□□□ -1.13
VHS1Q03785 RCR1YBR005W 642 nt8.01□□□□□ -1.13
VHS1Q03785 YOR343CYOR343C 327 nt8.01□□□□□ -1.13
VHS1Q03785 GGA2YHR108W 1758 nt8.01□□□□□ -1.13
VHS1Q03785 TOM71YHR117W 1920 nt8□□□□□ -1.13
VHS1Q03785 RPL12BYDR418W 498 nt8□□□□□ -1.13
VHS1Q03785 SER2YGR208W 930 nt8□□□□□ -1.13
VHS1Q03785 AGP3YFL055W 1677 nt7.99□□□□□ -1.13
VHS1Q03785 PAU21YOR394W 495 nt7.99□□□□□ -1.13
VHS1Q03785 PAU22YPL282C 495 nt7.99□□□□□ -1.13
VHS1Q03785 YMC2YBR104W 990 nt7.99□□□□□ -1.13
VHS1Q03785 RSM7YJR113C 744 nt7.98□□□□□ -1.13
VHS1Q03785 YLR280CYLR280C 351 nt7.98□□□□□ -1.13
VHS1Q03785 THI3YDL080C 1830 nt7.98□□□□□ -1.13
VHS1Q03785 YBL095WYBL095W 813 nt7.96□□□□□ -1.14
VHS1Q03785 LPD1YFL018C 1500 nt7.96□□□□□ -1.14
VHS1Q03785 HEM14YER014W 1620 nt7.95□□□□□ -1.14
VHS1Q03785 NPP2YEL016C 1482 nt7.94□□□□□ -1.14
VHS1Q03785 HTS1YPR033C 1641 nt7.94□□□□□ -1.14
VHS1Q03785 tE(CUC)DtE(CUC)D 72 nt7.94□□□□□ -1.14
VHS1Q03785 tE(CUC)ItE(CUC)I 72 nt7.94□□□□□ -1.14
VHS1Q03785 YFR020WYFR020W 699 nt7.94□□□□□ -1.14
VHS1Q03785 YAL016C-AYAL016C-A 315 nt7.94□□□□□ -1.14
VHS1Q03785 YMR316C-BYMR316C-B 309 nt7.94□□□□□ -1.14
VHS1Q03785 FRA1YLL029W 2250 nt7.94□□□□□ -1.14
VHS1Q03785 UFD1YGR048W 1086 nt7.93□□□□□ -1.14
VHS1Q03785 MIM1YOL026C 342 nt7.92□□□□□ -1.14
VHS1Q03785 HRA1HRA1 564 nt7.91□□□□□ -1.14
VHS1Q03785 SRP102YKL154W 735 nt7.91□□□□□ -1.14
VHS1Q03785 MRS4YKR052C 915 nt7.91□□□□□ -1.14
VHS1Q03785 ERO1YML130C 1692 nt7.91□□□□□ -1.14
VHS1Q03785 YOR268CYOR268C 399 nt7.9□□□□□ -1.14
VHS1Q03785 tD(GUC)BtD(GUC)B 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)DtD(GUC)D 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)G1tD(GUC)G1 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)G2tD(GUC)G2 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)I1tD(GUC)I1 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)I2tD(GUC)I2 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)J1tD(GUC)J1 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)J2tD(GUC)J2 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)J3tD(GUC)J3 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)J4tD(GUC)J4 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)KtD(GUC)K 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)L1tD(GUC)L1 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)L2tD(GUC)L2 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)MtD(GUC)M 72 nt7.89□□□□□ -1.15
VHS1Q03785 tD(GUC)OtD(GUC)O 72 nt7.89□□□□□ -1.15
VHS1Q03785 YLR460CYLR460C 1131 nt7.89□□□□□ -1.15
VHS1Q03785 AAT1YKL106W 1356 nt7.88□□□□□ -1.15
VHS1Q03785 TGA1tA(UGC)A 73 nt7.88□□□□□ -1.15
VHS1Q03785 tA(UGC)EtA(UGC)E 73 nt7.88□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 77 ms