Protein–RNA interactions for Protein: P38798

NMD2, Nonsense-mediated mRNA decay protein 2, yeastyeast

Known RBP Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD2P38798 DMA2YNL116W 1569 nt10.19□□□□□ -0.78
NMD2P38798 YJL064WYJL064W 396 nt10.19□□□□□ -0.78
NMD2P38798 SAN1YDR143C 1833 nt10.16□□□□□ -0.78
NMD2P38798 KGD2YDR148C 1392 nt10.15□□□□□ -0.78
NMD2P38798 PHB2YGR231C 933 nt10.15□□□□□ -0.78
NMD2P38798 MTO1YGL236C 2010 nt10.14□□□□□ -0.79
NMD2P38798 NAP1YKR048C 1254 nt10.14□□□□□ -0.79
NMD2P38798 REX2YLR059C 810 nt10.14□□□□□ -0.79
NMD2P38798 ADH3YMR083W 1128 nt10.14□□□□□ -0.79
NMD2P38798 PAU19YMR325W 375 nt10.14□□□□□ -0.79
NMD2P38798 SRP54YPR088C 1626 nt10.12□□□□□ -0.79
NMD2P38798 tA(AGC)DtA(AGC)D 73 nt10.12□□□□□ -0.79
NMD2P38798 tA(AGC)FtA(AGC)F 73 nt10.12□□□□□ -0.79
NMD2P38798 tA(AGC)GtA(AGC)G 73 nt10.12□□□□□ -0.79
NMD2P38798 tA(AGC)HtA(AGC)H 73 nt10.12□□□□□ -0.79
NMD2P38798 tA(AGC)JtA(AGC)J 73 nt10.12□□□□□ -0.79
NMD2P38798 tA(AGC)K1tA(AGC)K1 73 nt10.12□□□□□ -0.79
NMD2P38798 tA(AGC)K2tA(AGC)K2 73 nt10.12□□□□□ -0.79
NMD2P38798 tA(AGC)LtA(AGC)L 73 nt10.12□□□□□ -0.79
NMD2P38798 tA(AGC)M1tA(AGC)M1 73 nt10.12□□□□□ -0.79
NMD2P38798 tA(AGC)M2tA(AGC)M2 73 nt10.12□□□□□ -0.79
NMD2P38798 tA(AGC)PtA(AGC)P 73 nt10.12□□□□□ -0.79
NMD2P38798 CYT1YOR065W 930 nt10.12□□□□□ -0.79
NMD2P38798 GNP1YDR508C 1992 nt10.12□□□□□ -0.79
NMD2P38798 YKR012CYKR012C 378 nt10.11□□□□□ -0.79
NMD2P38798 FLX1YIL134W 936 nt10.09□□□□□ -0.79
NMD2P38798 PUP1YOR157C 786 nt10.09□□□□□ -0.79
NMD2P38798 IPL1YPL209C 1104 nt10.09□□□□□ -0.79
NMD2P38798 HXT10YFL011W 1641 nt10.08□□□□□ -0.8
NMD2P38798 YHR218WYHR218W 1812 nt10.08□□□□□ -0.8
NMD2P38798 SDS24YBR214W 1584 nt10.08□□□□□ -0.8
NMD2P38798 LEU4YNL104C 1860 nt10.07□□□□□ -0.8
NMD2P38798 SBP1YHL034C 885 nt10.05□□□□□ -0.8
NMD2P38798 MOB1YIL106W 945 nt10.05□□□□□ -0.8
NMD2P38798 VBA3YCL069W 1377 nt10.04□□□□□ -0.8
NMD2P38798 YDR467CYDR467C 327 nt10.02□□□□□ -0.81
NMD2P38798 YOR072WYOR072W 315 nt10.02□□□□□ -0.81
NMD2P38798 THI3YDL080C 1830 nt10.01□□□□□ -0.81
NMD2P38798 YPT11YNL304W 1254 nt10.01□□□□□ -0.81
NMD2P38798 AGP3YFL055W 1677 nt10.01□□□□□ -0.81
NMD2P38798 GAS1YMR307W 1680 nt10□□□□□ -0.81
NMD2P38798 YCR025CYCR025C 411 nt10□□□□□ -0.81
NMD2P38798 tE(CUC)DtE(CUC)D 72 nt10□□□□□ -0.81
NMD2P38798 tE(CUC)ItE(CUC)I 72 nt10□□□□□ -0.81
NMD2P38798 GPM1YKL152C 744 nt10□□□□□ -0.81
NMD2P38798 YMR316C-BYMR316C-B 309 nt9.99□□□□□ -0.81
NMD2P38798 PTC6YCR079W 1329 nt9.99□□□□□ -0.81
NMD2P38798 GGA2YHR108W 1758 nt9.98□□□□□ -0.81
NMD2P38798 INH1YDL181W 258 nt9.98□□□□□ -0.81
NMD2P38798 ENO1YGR254W 1314 nt9.98□□□□□ -0.81
NMD2P38798 TPN1YGL186C 1740 nt9.98□□□□□ -0.81
NMD2P38798 MDL2YPL270W 2322 nt9.96□□□□□ -0.81
NMD2P38798 CYC3YAL039C 810 nt9.96□□□□□ -0.82
NMD2P38798 YRF1-2YER190W 5046 nt9.95□□□□□ -0.82
NMD2P38798 SLG1YOR008C 1137 nt9.95□□□□□ -0.82
NMD2P38798 SRP102YKL154W 735 nt9.93□□□□□ -0.82
NMD2P38798 NPP2YEL016C 1482 nt9.92□□□□□ -0.82
NMD2P38798 LYS20YDL182W 1287 nt9.92□□□□□ -0.82
NMD2P38798 YFR020WYFR020W 699 nt9.92□□□□□ -0.82
NMD2P38798 YBL095WYBL095W 813 nt9.92□□□□□ -0.82
NMD2P38798 SER2YGR208W 930 nt9.91□□□□□ -0.82
NMD2P38798 YPL041CYPL041C 624 nt9.91□□□□□ -0.82
NMD2P38798 TOM71YHR117W 1920 nt9.91□□□□□ -0.82
NMD2P38798 MEX67YPL169C 1800 nt9.89□□□□□ -0.83
NMD2P38798 YLR280CYLR280C 351 nt9.89□□□□□ -0.83
NMD2P38798 ERO1YML130C 1692 nt9.89□□□□□ -0.83
NMD2P38798 RSM7YJR113C 744 nt9.88□□□□□ -0.83
NMD2P38798 HTS1YPR033C 1641 nt9.85□□□□□ -0.83
NMD2P38798 SWM1YDR260C 513 nt9.85□□□□□ -0.83
NMD2P38798 AAC3YBR085W 924 nt9.85□□□□□ -0.83
NMD2P38798 YCP4YCR004C 744 nt9.84□□□□□ -0.83
NMD2P38798 YMC2YBR104W 990 nt9.84□□□□□ -0.83
NMD2P38798 SAM50YNL026W 1455 nt9.84□□□□□ -0.83
NMD2P38798 FRA1YLL029W 2250 nt9.84□□□□□ -0.83
NMD2P38798 TGA1tA(UGC)A 73 nt9.82□□□□□ -0.84
NMD2P38798 tA(UGC)EtA(UGC)E 73 nt9.82□□□□□ -0.84
NMD2P38798 tA(UGC)GtA(UGC)G 73 nt9.82□□□□□ -0.84
NMD2P38798 tA(UGC)LtA(UGC)L 73 nt9.82□□□□□ -0.84
NMD2P38798 tA(UGC)OtA(UGC)O 73 nt9.82□□□□□ -0.84
NMD2P38798 TMS1YDR105C 1422 nt9.82□□□□□ -0.84
NMD2P38798 AAT1YKL106W 1356 nt9.8□□□□□ -0.84
NMD2P38798 YGR210CYGR210C 1236 nt9.8□□□□□ -0.84
NMD2P38798 MRS4YKR052C 915 nt9.8□□□□□ -0.84
NMD2P38798 ALR1YOL130W 2580 nt9.79□□□□□ -0.84
NMD2P38798 MLS1YNL117W 1665 nt9.79□□□□□ -0.84
NMD2P38798 FET5YFL041W 1869 nt9.79□□□□□ -0.84
NMD2P38798 NBA1YOL070C 1506 nt9.78□□□□□ -0.84
NMD2P38798 CBK1YNL161W 2271 nt9.77□□□□□ -0.84
NMD2P38798 LPD1YFL018C 1500 nt9.77□□□□□ -0.85
NMD2P38798 YPL108WYPL108W 507 nt9.75□□□□□ -0.85
NMD2P38798 UFD1YGR048W 1086 nt9.74□□□□□ -0.85
NMD2P38798 YIR035CYIR035C 765 nt9.73□□□□□ -0.85
NMD2P38798 YLR460CYLR460C 1131 nt9.73□□□□□ -0.85
NMD2P38798 TRP2YER090W 1524 nt9.72□□□□□ -0.85
NMD2P38798 snR86snR86 1004 nt9.72□□□□□ -0.85
NMD2P38798 YJR149WYJR149W 1215 nt9.72□□□□□ -0.85
NMD2P38798 YMR166CYMR166C 1107 nt9.72□□□□□ -0.85
NMD2P38798 NSG2YNL156C 900 nt9.72□□□□□ -0.85
NMD2P38798 FCY1YPR062W 477 nt9.72□□□□□ -0.85
NMD2P38798 YBR056WYBR056W 1506 nt9.72□□□□□ -0.85
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms