Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
C530025M09RikF6RGA8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
C530025M09RikF6RGA8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
C530025M09RikF6RGA8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C530025M09RikF6RGA8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
C530025M09RikF6RGA8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C530025M09RikF6RGA8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C530025M09RikF6RGA8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.72■□□□□ 0.11
C530025M09RikF6RGA8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C530025M09RikF6RGA8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
C530025M09RikF6RGA8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.71■□□□□ 0.11
C530025M09RikF6RGA8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
C530025M09RikF6RGA8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C530025M09RikF6RGA8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C530025M09RikF6RGA8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C530025M09RikF6RGA8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C530025M09RikF6RGA8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C530025M09RikF6RGA8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C530025M09RikF6RGA8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C530025M09RikF6RGA8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C530025M09RikF6RGA8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
C530025M09RikF6RGA8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
C530025M09RikF6RGA8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C530025M09RikF6RGA8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
C530025M09RikF6RGA8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C530025M09RikF6RGA8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
C530025M09RikF6RGA8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C530025M09RikF6RGA8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C530025M09RikF6RGA8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
C530025M09RikF6RGA8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
C530025M09RikF6RGA8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C530025M09RikF6RGA8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C530025M09RikF6RGA8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
C530025M09RikF6RGA8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
C530025M09RikF6RGA8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C530025M09RikF6RGA8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
C530025M09RikF6RGA8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
C530025M09RikF6RGA8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
C530025M09RikF6RGA8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
C530025M09RikF6RGA8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C530025M09RikF6RGA8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
C530025M09RikF6RGA8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
C530025M09RikF6RGA8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
C530025M09RikF6RGA8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C530025M09RikF6RGA8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C530025M09RikF6RGA8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C530025M09RikF6RGA8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C530025M09RikF6RGA8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C530025M09RikF6RGA8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C530025M09RikF6RGA8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C530025M09RikF6RGA8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
C530025M09RikF6RGA8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C530025M09RikF6RGA8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
C530025M09RikF6RGA8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC15.59■□□□□ 0.09
C530025M09RikF6RGA8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C530025M09RikF6RGA8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
C530025M09RikF6RGA8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
C530025M09RikF6RGA8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C530025M09RikF6RGA8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
C530025M09RikF6RGA8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
C530025M09RikF6RGA8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.58■□□□□ 0.08
C530025M09RikF6RGA8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
C530025M09RikF6RGA8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C530025M09RikF6RGA8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C530025M09RikF6RGA8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C530025M09RikF6RGA8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
C530025M09RikF6RGA8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
C530025M09RikF6RGA8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C530025M09RikF6RGA8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C530025M09RikF6RGA8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.56■□□□□ 0.08
C530025M09RikF6RGA8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C530025M09RikF6RGA8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
C530025M09RikF6RGA8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
C530025M09RikF6RGA8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.55■□□□□ 0.08
C530025M09RikF6RGA8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
C530025M09RikF6RGA8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
C530025M09RikF6RGA8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
C530025M09RikF6RGA8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
C530025M09RikF6RGA8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
C530025M09RikF6RGA8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
C530025M09RikF6RGA8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C530025M09RikF6RGA8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C530025M09RikF6RGA8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C530025M09RikF6RGA8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
C530025M09RikF6RGA8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C530025M09RikF6RGA8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C530025M09RikF6RGA8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C530025M09RikF6RGA8 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.53■□□□□ 0.08
C530025M09RikF6RGA8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C530025M09RikF6RGA8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C530025M09RikF6RGA8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C530025M09RikF6RGA8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C530025M09RikF6RGA8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
C530025M09RikF6RGA8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
C530025M09RikF6RGA8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C530025M09RikF6RGA8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C530025M09RikF6RGA8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
C530025M09RikF6RGA8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
C530025M09RikF6RGA8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.51■□□□□ 0.07
C530025M09RikF6RGA8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms