Protein–RNA interactions for Protein: Q07793

TY1B-DR4, Transposon Ty1-DR4 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR4Q07793 MRPL32YCR003W 552 nt-2.54□□□□□ -2.82
TY1B-DR4Q07793 YDR220CYDR220C 294 nt-2.54□□□□□ -2.82
TY1B-DR4Q07793 YHR007C-AYHR007C-A 216 nt-2.54□□□□□ -2.82
TY1B-DR4Q07793 YKL044WYKL044W 321 nt-2.54□□□□□ -2.82
TY1B-DR4Q07793 YNL303WYNL303W 348 nt-2.54□□□□□ -2.82
TY1B-DR4Q07793 snR77snR77 88 nt-2.56□□□□□ -2.82
TY1B-DR4Q07793 POP6YGR030C 477 nt-2.56□□□□□ -2.82
TY1B-DR4Q07793 YKL083WYKL083W 615 nt-2.56□□□□□ -2.82
TY1B-DR4Q07793 YPR039WYPR039W 336 nt-2.57□□□□□ -2.82
TY1B-DR4Q07793 YLR456WYLR456W 615 nt-2.59□□□□□ -2.82
TY1B-DR4Q07793 CSE2YNR010W 450 nt-2.59□□□□□ -2.82
TY1B-DR4Q07793 YPR002C-AYPR002C-A 198 nt-2.62□□□□□ -2.83
TY1B-DR4Q07793 YER090C-AYER090C-A 90 nt-2.63□□□□□ -2.83
TY1B-DR4Q07793 YFL012WYFL012W 447 nt-2.66□□□□□ -2.84
TY1B-DR4Q07793 RPS30AYLR287C-A 192 nt-2.66□□□□□ -2.84
TY1B-DR4Q07793 YEL020C-BYEL020C-B 198 nt-2.67□□□□□ -2.84
TY1B-DR4Q07793 YGR240C-AYGR240C-A 201 nt-2.67□□□□□ -2.84
TY1B-DR4Q07793 snR39BsnR39B 96 nt-2.67□□□□□ -2.84
TY1B-DR4Q07793 YNL205CYNL205C 423 nt-2.68□□□□□ -2.84
TY1B-DR4Q07793 YDL011CYDL011C 324 nt-2.7□□□□□ -2.84
TY1B-DR4Q07793 YAF9YNL107W 681 nt-2.7□□□□□ -2.84
TY1B-DR4Q07793 YDR426CYDR426C 378 nt-2.71□□□□□ -2.84
TY1B-DR4Q07793 BI2Q0110 1272 nt-2.71□□□□□ -2.84
TY1B-DR4Q07793 tQ(UUG)QtQ(UUG)Q 76 nt-2.71□□□□□ -2.84
TY1B-DR4Q07793 YJR162CYJR162C 351 nt-2.71□□□□□ -2.84
TY1B-DR4Q07793 YNL337WYNL337W 255 nt-2.71□□□□□ -2.84
TY1B-DR4Q07793 YLR163W-AYLR163W-A 114 nt-2.74□□□□□ -2.85
TY1B-DR4Q07793 PRM3YPL192C 402 nt-2.75□□□□□ -2.85
TY1B-DR4Q07793 RPS27BYHR021C 249 nt-2.76□□□□□ -2.85
TY1B-DR4Q07793 YGR270C-AYGR270C-A 219 nt-2.77□□□□□ -2.85
TY1B-DR4Q07793 YMR193C-AYMR193C-A 387 nt-2.77□□□□□ -2.85
TY1B-DR4Q07793 YMR315W-AYMR315W-A 108 nt-2.77□□□□□ -2.85
TY1B-DR4Q07793 ATP19YOL077W-A 207 nt-2.77□□□□□ -2.85
TY1B-DR4Q07793 YOR309CYOR309C 381 nt-2.78□□□□□ -2.85
TY1B-DR4Q07793 YNL266WYNL266W 420 nt-2.79□□□□□ -2.86
TY1B-DR4Q07793 IRC13YOR235W 315 nt-2.79□□□□□ -2.86
TY1B-DR4Q07793 YLR202CYLR202C 327 nt-2.81□□□□□ -2.86
TY1B-DR4Q07793 GPI15YNL038W 690 nt-2.82□□□□□ -2.86
TY1B-DR4Q07793 YML054C-AYML054C-A 159 nt-2.83□□□□□ -2.86
TY1B-DR4Q07793 TOM22YNL131W 459 nt-2.83□□□□□ -2.86
TY1B-DR4Q07793 snR57snR57 88 nt-2.84□□□□□ -2.86
TY1B-DR4Q07793 AI5_BETAQ0075 1065 nt-2.89□□□□□ -2.87
TY1B-DR4Q07793 YMR172C-AYMR172C-A 384 nt-2.89□□□□□ -2.87
TY1B-DR4Q07793 TSC3YBR058C-A 243 nt-2.91□□□□□ -2.88
TY1B-DR4Q07793 YOL083C-AYOL083C-A 141 nt-2.93□□□□□ -2.88
TY1B-DR4Q07793 YGR069WYGR069W 336 nt-2.93□□□□□ -2.88
TY1B-DR4Q07793 snR50snR50 90 nt-2.93□□□□□ -2.88
TY1B-DR4Q07793 YDR544CYDR544C 429 nt-2.94□□□□□ -2.88
TY1B-DR4Q07793 YIL029CYIL029C 429 nt-2.94□□□□□ -2.88
TY1B-DR4Q07793 YDR048CYDR048C 315 nt-2.96□□□□□ -2.88
TY1B-DR4Q07793 YOR314W-AYOR314W-A 111 nt-2.97□□□□□ -2.89
TY1B-DR4Q07793 YBL071CYBL071C 309 nt-2.99□□□□□ -2.89
TY1B-DR4Q07793 YER175W-AYER175W-A 165 nt-3.05□□□□□ -2.9
TY1B-DR4Q07793 YLR269CYLR269C 351 nt-3.05□□□□□ -2.9
TY1B-DR4Q07793 PCC1YKR095W-A 267 nt-3.08□□□□□ -2.9
TY1B-DR4Q07793 snR67snR67 82 nt-3.1□□□□□ -2.91
TY1B-DR4Q07793 snR69snR69 101 nt-3.11□□□□□ -2.91
TY1B-DR4Q07793 YDR524W-CYDR524W-C 90 nt-3.11□□□□□ -2.91
TY1B-DR4Q07793 YGL149WYGL149W 306 nt-3.13□□□□□ -2.91
TY1B-DR4Q07793 YLL019W-AYLL019W-A 93 nt-3.13□□□□□ -2.91
TY1B-DR4Q07793 snR9snR9 187 nt-3.15□□□□□ -2.91
TY1B-DR4Q07793 ATG16YMR159C 453 nt-3.15□□□□□ -2.91
TY1B-DR4Q07793 YML099W-AYML099W-A 330 nt-3.16□□□□□ -2.92
TY1B-DR4Q07793 YLR217WYLR217W 324 nt-3.18□□□□□ -2.92
TY1B-DR4Q07793 YGR174W-AYGR174W-A 87 nt-3.21□□□□□ -2.92
TY1B-DR4Q07793 YDR102CYDR102C 333 nt-3.23□□□□□ -2.93
TY1B-DR4Q07793 HMRA1YCR097W 381 nt-3.24□□□□□ -2.93
TY1B-DR4Q07793 YOR008C-AYOR008C-A 225 nt-3.24□□□□□ -2.93
TY1B-DR4Q07793 YJL197C-AYJL197C-A 282 nt-3.26□□□□□ -2.93
TY1B-DR4Q07793 YLR342W-AYLR342W-A 174 nt-3.29□□□□□ -2.94
TY1B-DR4Q07793 YER137W-AYER137W-A 306 nt-3.3□□□□□ -2.94
TY1B-DR4Q07793 YBR182C-AYBR182C-A 195 nt-3.31□□□□□ -2.94
TY1B-DR4Q07793 YDL016CYDL016C 303 nt-3.33□□□□□ -2.94
TY1B-DR4Q07793 YIL115W-AYIL115W-A 372 nt-3.41□□□□□ -2.95
TY1B-DR4Q07793 YDL158CYDL158C 309 nt-3.42□□□□□ -2.96
TY1B-DR4Q07793 YAR047CYAR047C 321 nt-3.42□□□□□ -2.96
TY1B-DR4Q07793 YOR376W-AYOR376W-A 156 nt-3.44□□□□□ -2.96
TY1B-DR4Q07793 tD(GUC)QtD(GUC)Q 75 nt-3.45□□□□□ -2.96
TY1B-DR4Q07793 YDR524C-AYDR524C-A 120 nt-3.48□□□□□ -2.97
TY1B-DR4Q07793 YER097WYER097W 330 nt-3.48□□□□□ -2.97
TY1B-DR4Q07793 YOR072W-BYOR072W-B 162 nt-3.51□□□□□ -2.97
TY1B-DR4Q07793 YLR286W-AYLR286W-A 135 nt-3.52□□□□□ -2.97
TY1B-DR4Q07793 YGR146C-AYGR146C-A 162 nt-3.57□□□□□ -2.98
TY1B-DR4Q07793 snR34snR34 203 nt-3.59□□□□□ -2.98
TY1B-DR4Q07793 YBR196C-AYBR196C-A 150 nt-3.61□□□□□ -2.99
TY1B-DR4Q07793 STE18YJR086W 333 nt-3.62□□□□□ -2.99
TY1B-DR4Q07793 YOR316C-AYOR316C-A 210 nt-3.62□□□□□ -2.99
TY1B-DR4Q07793 YPR197CYPR197C 564 nt-3.62□□□□□ -2.99
TY1B-DR4Q07793 YDL159C-BYDL159C-B 177 nt-3.63□□□□□ -2.99
TY1B-DR4Q07793 CSN9YDR179C 489 nt-3.66□□□□□ -3
TY1B-DR4Q07793 MPC1YGL080W 393 nt-3.66□□□□□ -3
TY1B-DR4Q07793 YFL019CYFL019C 354 nt-3.68□□□□□ -3
TY1B-DR4Q07793 YFL032WYFL032W 321 nt-3.68□□□□□ -3
TY1B-DR4Q07793 YNL198CYNL198C 303 nt-3.68□□□□□ -3
TY1B-DR4Q07793 YJR157WYJR157W 363 nt-3.77□□□□□ -3.01
TY1B-DR4Q07793 YOL038C-AYOL038C-A 96 nt-3.78□□□□□ -3.01
TY1B-DR4Q07793 YER181CYER181C 324 nt-3.79□□□□□ -3.02
TY1B-DR4Q07793 tM(CAU)Q2tM(CAU)Q2 78 nt-3.79□□□□□ -3.02
TY1B-DR4Q07793 snR55snR55 98 nt-3.81□□□□□ -3.02
TY1B-DR4Q07793 YBR178WYBR178W 375 nt-3.84□□□□□ -3.02
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms