Protein–RNA interactions for Protein: Q05775

HCR1, Eukaryotic translation initiation factor 3 subunit J, yeastyeast

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCR1Q05775 YPL044CYPL044C 549 nt1.12□□□□□ -2.23
HCR1Q05775 SWI4YER111C 3282 nt1.12□□□□□ -2.23
HCR1Q05775 YOL014WYOL014W 375 nt1.11□□□□□ -2.23
HCR1Q05775 VAM6YDL077C 3150 nt1.11□□□□□ -2.23
HCR1Q05775 PAN2YGL094C 3348 nt1.1□□□□□ -2.23
HCR1Q05775 YBL053WYBL053W 375 nt1.1□□□□□ -2.23
HCR1Q05775 YOR381W-AYOR381W-A 168 nt1.1□□□□□ -2.23
HCR1Q05775 UTP8YGR128C 2142 nt1.09□□□□□ -2.23
HCR1Q05775 NOP9YJL010C 2001 nt1.09□□□□□ -2.24
HCR1Q05775 YIL002W-AYIL002W-A 210 nt1.08□□□□□ -2.24
HCR1Q05775 ROM2YLR371W 4071 nt1.08□□□□□ -2.24
HCR1Q05775 PRP5YBR237W 2550 nt1.07□□□□□ -2.24
HCR1Q05775 YDL007C-AYDL007C-A 258 nt1.07□□□□□ -2.24
HCR1Q05775 YLR282CYLR282C 342 nt1.07□□□□□ -2.24
HCR1Q05775 NST1YNL091W 3723 nt1.07□□□□□ -2.24
HCR1Q05775 CDC39YCR093W 6327 nt1.07□□□□□ -2.24
HCR1Q05775 BEM2YER155C 6504 nt1.06□□□□□ -2.24
HCR1Q05775 PRP42YDR235W 1635 nt1.06□□□□□ -2.24
HCR1Q05775 MYO1YHR023W 5787 nt1.06□□□□□ -2.24
HCR1Q05775 YHL015W-AYHL015W-A 84 nt1.05□□□□□ -2.24
HCR1Q05775 RPL26BYGR034W 384 nt1.04□□□□□ -2.24
HCR1Q05775 snR190snR190 190 nt1.04□□□□□ -2.24
HCR1Q05775 STB6YKL072W 2301 nt1.04□□□□□ -2.24
HCR1Q05775 YDL073WYDL073W 2955 nt1.03□□□□□ -2.24
HCR1Q05775 HAL9YOL089C 3093 nt1.03□□□□□ -2.24
HCR1Q05775 YML002WYML002W 2214 nt1.03□□□□□ -2.25
HCR1Q05775 YIL142C-AYIL142C-A 333 nt1.02□□□□□ -2.25
HCR1Q05775 FYV10YIL097W 1551 nt1.01□□□□□ -2.25
HCR1Q05775 COX5BYIL111W 456 nt1.01□□□□□ -2.25
HCR1Q05775 PRP16YKR086W 3216 nt1□□□□□ -2.25
HCR1Q05775 Q0092Q0092 141 nt1□□□□□ -2.25
HCR1Q05775 YKL100W-AYKL100W-A 90 nt1□□□□□ -2.25
HCR1Q05775 BIR1YJR089W 2865 nt1□□□□□ -2.25
HCR1Q05775 BFR2YDR299W 1605 nt1□□□□□ -2.25
HCR1Q05775 YOR102WYOR102W 351 nt0.99□□□□□ -2.25
HCR1Q05775 YMR160WYMR160W 2451 nt0.98□□□□□ -2.25
HCR1Q05775 TAH1YCR060W 336 nt0.98□□□□□ -2.25
HCR1Q05775 YDR544CYDR544C 429 nt0.98□□□□□ -2.25
HCR1Q05775 YGL182CYGL182C 324 nt0.97□□□□□ -2.25
HCR1Q05775 MSN5YDR335W 3675 nt0.97□□□□□ -2.25
HCR1Q05775 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
HCR1Q05775 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
HCR1Q05775 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
HCR1Q05775 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
HCR1Q05775 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
HCR1Q05775 YOR170WYOR170W 306 nt0.96□□□□□ -2.26
HCR1Q05775 ASE1YOR058C 2658 nt0.96□□□□□ -2.26
HCR1Q05775 ATP8Q0080 147 nt0.95□□□□□ -2.26
HCR1Q05775 SEC3YER008C 4011 nt0.94□□□□□ -2.26
HCR1Q05775 YKL145W-AYKL145W-A 93 nt0.94□□□□□ -2.26
HCR1Q05775 YBL039C-AYBL039C-A 84 nt0.94□□□□□ -2.26
HCR1Q05775 RKR1YMR247C 4689 nt0.94□□□□□ -2.26
HCR1Q05775 YNL170WYNL170W 396 nt0.93□□□□□ -2.26
HCR1Q05775 SCC2YDR180W 4482 nt0.93□□□□□ -2.26
HCR1Q05775 tN(GUU)QtN(GUU)Q 71 nt0.92□□□□□ -2.26
HCR1Q05775 YGR164WYGR164W 336 nt0.92□□□□□ -2.26
HCR1Q05775 CHS6YJL099W 2241 nt0.91□□□□□ -2.26
HCR1Q05775 BEM3YPL115C 3387 nt0.91□□□□□ -2.26
HCR1Q05775 YLR232WYLR232W 348 nt0.91□□□□□ -2.26
HCR1Q05775 tL(UAA)QtL(UAA)Q 85 nt0.9□□□□□ -2.27
HCR1Q05775 YOR314W-AYOR314W-A 111 nt0.9□□□□□ -2.27
HCR1Q05775 YOR329W-AYOR329W-A 210 nt0.9□□□□□ -2.27
HCR1Q05775 SEC8YPR055W 3198 nt0.89□□□□□ -2.27
HCR1Q05775 SNU13YEL026W 381 nt0.86□□□□□ -2.27
HCR1Q05775 YLR041WYLR041W 321 nt0.86□□□□□ -2.27
HCR1Q05775 YPR160W-AYPR160W-A 81 nt0.86□□□□□ -2.27
HCR1Q05775 YPR117WYPR117W 7470 nt0.85□□□□□ -2.27
HCR1Q05775 SDH6YDR379C-A 240 nt0.85□□□□□ -2.27
HCR1Q05775 tM(CAU)Q2tM(CAU)Q2 78 nt0.85□□□□□ -2.27
HCR1Q05775 YHR131W-AYHR131W-A 246 nt0.85□□□□□ -2.27
HCR1Q05775 snR48snR48 113 nt0.85□□□□□ -2.27
HCR1Q05775 YLR399W-AYLR399W-A 105 nt0.84□□□□□ -2.27
HCR1Q05775 SEC1YDR164C 2175 nt0.84□□□□□ -2.28
HCR1Q05775 YNL067W-BYNL067W-B 141 nt0.82□□□□□ -2.28
HCR1Q05775 snR39BsnR39B 96 nt0.82□□□□□ -2.28
HCR1Q05775 YCS4YLR272C 3531 nt0.82□□□□□ -2.28
HCR1Q05775 YDR210WYDR210W 228 nt0.8□□□□□ -2.28
HCR1Q05775 YCL001W-BYCL001W-B 255 nt0.8□□□□□ -2.28
HCR1Q05775 YOR192C-BYOR192C-B 5313 nt0.79□□□□□ -2.28
HCR1Q05775 COG6YNL041C 2520 nt0.78□□□□□ -2.28
HCR1Q05775 KAP120YPL125W 3099 nt0.77□□□□□ -2.29
HCR1Q05775 OST4YDL232W 111 nt0.77□□□□□ -2.29
HCR1Q05775 YBR072C-AYBR072C-A 162 nt0.77□□□□□ -2.29
HCR1Q05775 YJL127W-AYJL127W-A 117 nt0.76□□□□□ -2.29
HCR1Q05775 tT(AGU)BtT(AGU)B 73 nt0.75□□□□□ -2.29
HCR1Q05775 tT(AGU)CtT(AGU)C 73 nt0.75□□□□□ -2.29
HCR1Q05775 tT(AGU)DtT(AGU)D 73 nt0.75□□□□□ -2.29
HCR1Q05775 tT(AGU)HtT(AGU)H 73 nt0.75□□□□□ -2.29
HCR1Q05775 tT(AGU)I1tT(AGU)I1 73 nt0.75□□□□□ -2.29
HCR1Q05775 tT(AGU)I2tT(AGU)I2 73 nt0.75□□□□□ -2.29
HCR1Q05775 tT(AGU)JtT(AGU)J 73 nt0.75□□□□□ -2.29
HCR1Q05775 tT(AGU)N1tT(AGU)N1 73 nt0.75□□□□□ -2.29
HCR1Q05775 tT(AGU)N2tT(AGU)N2 73 nt0.75□□□□□ -2.29
HCR1Q05775 tT(AGU)O1tT(AGU)O1 73 nt0.75□□□□□ -2.29
HCR1Q05775 tT(AGU)O2tT(AGU)O2 73 nt0.75□□□□□ -2.29
HCR1Q05775 SOM1YEL059C-A 225 nt0.73□□□□□ -2.29
HCR1Q05775 AI1Q0050 2505 nt0.73□□□□□ -2.29
HCR1Q05775 CSE1YGL238W 2883 nt0.72□□□□□ -2.29
HCR1Q05775 YLL006W-AYLL006W-A 177 nt0.72□□□□□ -2.29
HCR1Q05775 YSP1YHR155W 3687 nt0.72□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 39.1 ms