Protein–RNA interactions for Protein: Q02948

VPS30, Vacuolar protein sorting-associated protein 30, yeastyeast

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS30Q02948 HKR1YDR420W 5409 nt1.61□□□□□ -2.15
VPS30Q02948 COG6YNL041C 2520 nt1.6□□□□□ -2.15
VPS30Q02948 snR39BsnR39B 96 nt1.6□□□□□ -2.15
VPS30Q02948 TAH1YCR060W 336 nt1.59□□□□□ -2.15
VPS30Q02948 KAP120YPL125W 3099 nt1.59□□□□□ -2.16
VPS30Q02948 RAD9YDR217C 3930 nt1.58□□□□□ -2.16
VPS30Q02948 YDR524C-AYDR524C-A 120 nt1.58□□□□□ -2.16
VPS30Q02948 YML002WYML002W 2214 nt1.58□□□□□ -2.16
VPS30Q02948 WAR1YML076C 2835 nt1.57□□□□□ -2.16
VPS30Q02948 YCR095W-AYCR095W-A 159 nt1.57□□□□□ -2.16
VPS30Q02948 AZF1YOR113W 2745 nt1.57□□□□□ -2.16
VPS30Q02948 UTP8YGR128C 2142 nt1.57□□□□□ -2.16
VPS30Q02948 ROM2YLR371W 4071 nt1.56□□□□□ -2.16
VPS30Q02948 snR190snR190 190 nt1.56□□□□□ -2.16
VPS30Q02948 YBR099CYBR099C 384 nt1.56□□□□□ -2.16
VPS30Q02948 YDL073WYDL073W 2955 nt1.56□□□□□ -2.16
VPS30Q02948 FYV10YIL097W 1551 nt1.55□□□□□ -2.16
VPS30Q02948 PRP16YKR086W 3216 nt1.55□□□□□ -2.16
VPS30Q02948 SSK2YNR031C 4740 nt1.54□□□□□ -2.16
VPS30Q02948 YDR544CYDR544C 429 nt1.54□□□□□ -2.16
VPS30Q02948 tH(GUG)E1tH(GUG)E1 72 nt1.54□□□□□ -2.16
VPS30Q02948 tH(GUG)E2tH(GUG)E2 72 nt1.54□□□□□ -2.16
VPS30Q02948 tH(GUG)G1tH(GUG)G1 72 nt1.54□□□□□ -2.16
VPS30Q02948 tH(GUG)G2tH(GUG)G2 72 nt1.54□□□□□ -2.16
VPS30Q02948 tH(GUG)HtH(GUG)H 72 nt1.54□□□□□ -2.16
VPS30Q02948 tH(GUG)KtH(GUG)K 72 nt1.54□□□□□ -2.16
VPS30Q02948 tH(GUG)MtH(GUG)M 72 nt1.54□□□□□ -2.16
VPS30Q02948 YNL067W-BYNL067W-B 141 nt1.54□□□□□ -2.16
VPS30Q02948 NUP145YGL092W 3954 nt1.54□□□□□ -2.16
VPS30Q02948 YGR130CYGR130C 2451 nt1.53□□□□□ -2.16
VPS30Q02948 QCR9YGR183C 201 nt1.53□□□□□ -2.16
VPS30Q02948 YHR131W-AYHR131W-A 246 nt1.53□□□□□ -2.16
VPS30Q02948 CDC25YLR310C 4770 nt1.53□□□□□ -2.16
VPS30Q02948 YNL103W-AYNL103W-A 90 nt1.53□□□□□ -2.16
VPS30Q02948 RPL26BYGR034W 384 nt1.52□□□□□ -2.17
VPS30Q02948 YBR200W-AYBR200W-A 165 nt1.52□□□□□ -2.17
VPS30Q02948 SEC21YNL287W 2808 nt1.51□□□□□ -2.17
VPS30Q02948 RPM2YML091C 3609 nt1.51□□□□□ -2.17
VPS30Q02948 TFB5YDR079C-A 219 nt1.5□□□□□ -2.17
VPS30Q02948 PMP2YEL017C-A 132 nt1.5□□□□□ -2.17
VPS30Q02948 SOM1YEL059C-A 225 nt1.5□□□□□ -2.17
VPS30Q02948 GEA2YEL022W 4380 nt1.49□□□□□ -2.17
VPS30Q02948 FIG2YCR089W 4830 nt1.49□□□□□ -2.17
VPS30Q02948 LAA1YJL207C 6045 nt1.48□□□□□ -2.17
VPS30Q02948 SMC1YFL008W 3678 nt1.47□□□□□ -2.17
VPS30Q02948 RCO1YMR075W 2055 nt1.46□□□□□ -2.18
VPS30Q02948 YLR232WYLR232W 348 nt1.46□□□□□ -2.18
VPS30Q02948 YDR210WYDR210W 228 nt1.45□□□□□ -2.18
VPS30Q02948 STF2YGR008C 255 nt1.43□□□□□ -2.18
VPS30Q02948 YPL060C-AYPL060C-A 3315 nt1.43□□□□□ -2.18
VPS30Q02948 snR61snR61 90 nt1.42□□□□□ -2.18
VPS30Q02948 YMR326CYMR326C 309 nt1.42□□□□□ -2.18
VPS30Q02948 IML1YJR138W 4755 nt1.42□□□□□ -2.18
VPS30Q02948 SEC1YDR164C 2175 nt1.41□□□□□ -2.18
VPS30Q02948 SEC8YPR055W 3198 nt1.41□□□□□ -2.18
VPS30Q02948 YPR160W-AYPR160W-A 81 nt1.4□□□□□ -2.19
VPS30Q02948 tM(CAU)Q2tM(CAU)Q2 78 nt1.39□□□□□ -2.19
VPS30Q02948 tN(GUU)QtN(GUU)Q 71 nt1.39□□□□□ -2.19
VPS30Q02948 YHR217CYHR217C 462 nt1.38□□□□□ -2.19
VPS30Q02948 HUG1YML058W-A 207 nt1.37□□□□□ -2.19
VPS30Q02948 tV(UAC)BtV(UAC)B 74 nt1.36□□□□□ -2.19
VPS30Q02948 tV(UAC)DtV(UAC)D 74 nt1.36□□□□□ -2.19
VPS30Q02948 YLR399W-AYLR399W-A 105 nt1.36□□□□□ -2.19
VPS30Q02948 SIP4YJL089W 2490 nt1.33□□□□□ -2.2
VPS30Q02948 SBH1YER087C-B 249 nt1.32□□□□□ -2.2
VPS30Q02948 YGR146C-AYGR146C-A 162 nt1.31□□□□□ -2.2
VPS30Q02948 YJL127W-AYJL127W-A 117 nt1.31□□□□□ -2.2
VPS30Q02948 NST1YNL091W 3723 nt1.3□□□□□ -2.2
VPS30Q02948 BIR1YJR089W 2865 nt1.3□□□□□ -2.2
VPS30Q02948 NNF2YGR089W 2811 nt1.28□□□□□ -2.2
VPS30Q02948 VAM6YDL077C 3150 nt1.28□□□□□ -2.2
VPS30Q02948 YGL041C-BYGL041C-B 183 nt1.27□□□□□ -2.21
VPS30Q02948 YSP1YHR155W 3687 nt1.26□□□□□ -2.21
VPS30Q02948 ULP2YIL031W 3105 nt1.23□□□□□ -2.21
VPS30Q02948 YNL266WYNL266W 420 nt1.22□□□□□ -2.21
VPS30Q02948 YNL284C-BYNL284C-B 5268 nt1.2□□□□□ -2.22
VPS30Q02948 YBR072C-AYBR072C-A 162 nt1.2□□□□□ -2.22
VPS30Q02948 BUD3YCL014W 4911 nt1.2□□□□□ -2.22
VPS30Q02948 SPT7YBR081C 3999 nt1.2□□□□□ -2.22
VPS30Q02948 snR81snR81 201 nt1.19□□□□□ -2.22
VPS30Q02948 YPR117WYPR117W 7470 nt1.17□□□□□ -2.22
VPS30Q02948 RKR1YMR247C 4689 nt1.17□□□□□ -2.22
VPS30Q02948 UBP3YER151C 2739 nt1.17□□□□□ -2.22
VPS30Q02948 GLG1YKR058W 1851 nt1.17□□□□□ -2.22
VPS30Q02948 BUL2YML111W 2763 nt1.15□□□□□ -2.22
VPS30Q02948 BEM3YPL115C 3387 nt1.15□□□□□ -2.22
VPS30Q02948 YDL247W-AYDL247W-A 75 nt1.14□□□□□ -2.23
VPS30Q02948 tS(GCU)Q1tS(GCU)Q1 86 nt1.14□□□□□ -2.23
VPS30Q02948 SCC2YDR180W 4482 nt1.13□□□□□ -2.23
VPS30Q02948 DOP1YDR141C 5097 nt1.13□□□□□ -2.23
VPS30Q02948 BEM2YER155C 6504 nt1.12□□□□□ -2.23
VPS30Q02948 YAL037C-AYAL037C-A 93 nt1.11□□□□□ -2.23
VPS30Q02948 EMT1tM(CAU)D 73 nt1.09□□□□□ -2.23
VPS30Q02948 EMT5tM(CAU)J1 73 nt1.09□□□□□ -2.23
VPS30Q02948 EMT3tM(CAU)J2 73 nt1.09□□□□□ -2.23
VPS30Q02948 EMT4tM(CAU)M 73 nt1.09□□□□□ -2.23
VPS30Q02948 EMT2tM(CAU)O2 73 nt1.09□□□□□ -2.23
VPS30Q02948 MYO1YHR023W 5787 nt1.09□□□□□ -2.24
VPS30Q02948 SEC10YLR166C 2616 nt1.08□□□□□ -2.24
VPS30Q02948 YLL006W-AYLL006W-A 177 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 30.9 ms