Protein–RNA interactions for Protein: P53953

SFB2, SED5-binding protein 2, yeastyeast

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SFB2P53953 STB6YKL072W 2301 nt1.65□□□□□ -2.15
SFB2P53953 QCR9YGR183C 201 nt1.64□□□□□ -2.15
SFB2P53953 BRR2YER172C 6492 nt1.64□□□□□ -2.15
SFB2P53953 APL3YBL037W 3078 nt1.63□□□□□ -2.15
SFB2P53953 FIG2YCR089W 4830 nt1.63□□□□□ -2.15
SFB2P53953 NUP145YGL092W 3954 nt1.63□□□□□ -2.15
SFB2P53953 BST1YFL025C 3090 nt1.62□□□□□ -2.15
SFB2P53953 YLR041WYLR041W 321 nt1.62□□□□□ -2.15
SFB2P53953 RPM2YML091C 3609 nt1.62□□□□□ -2.15
SFB2P53953 SEC21YNL287W 2808 nt1.62□□□□□ -2.15
SFB2P53953 snR190snR190 190 nt1.61□□□□□ -2.15
SFB2P53953 YBR200W-AYBR200W-A 165 nt1.61□□□□□ -2.15
SFB2P53953 PET127YOR017W 2403 nt1.61□□□□□ -2.15
SFB2P53953 FYV10YIL097W 1551 nt1.6□□□□□ -2.15
SFB2P53953 snR61snR61 90 nt1.6□□□□□ -2.15
SFB2P53953 CAT8YMR280C 4302 nt1.59□□□□□ -2.15
SFB2P53953 SEC3YER008C 4011 nt1.59□□□□□ -2.15
SFB2P53953 tM(CAU)Q2tM(CAU)Q2 78 nt1.59□□□□□ -2.15
SFB2P53953 YLR232WYLR232W 348 nt1.59□□□□□ -2.15
SFB2P53953 YNL103W-AYNL103W-A 90 nt1.59□□□□□ -2.15
SFB2P53953 YGR130CYGR130C 2451 nt1.58□□□□□ -2.16
SFB2P53953 SXM1YDR395W 2835 nt1.58□□□□□ -2.16
SFB2P53953 SSK2YNR031C 4740 nt1.57□□□□□ -2.16
SFB2P53953 tQ(UUG)E2tQ(UUG)E2 72 nt1.56□□□□□ -2.16
SFB2P53953 MSH3YCR092C 3057 nt1.56□□□□□ -2.16
SFB2P53953 AZF1YOR113W 2745 nt1.55□□□□□ -2.16
SFB2P53953 CCH1YGR217W 6120 nt1.55□□□□□ -2.16
SFB2P53953 RAD9YDR217C 3930 nt1.55□□□□□ -2.16
SFB2P53953 FYV8YGR196C 2454 nt1.54□□□□□ -2.16
SFB2P53953 YHR217CYHR217C 462 nt1.54□□□□□ -2.16
SFB2P53953 snR39BsnR39B 96 nt1.54□□□□□ -2.16
SFB2P53953 YHR131W-AYHR131W-A 246 nt1.53□□□□□ -2.16
SFB2P53953 GEA2YEL022W 4380 nt1.53□□□□□ -2.16
SFB2P53953 EST2YLR318W 2655 nt1.53□□□□□ -2.17
SFB2P53953 MSN5YDR335W 3675 nt1.52□□□□□ -2.17
SFB2P53953 SEC8YPR055W 3198 nt1.52□□□□□ -2.17
SFB2P53953 ASE1YOR058C 2658 nt1.52□□□□□ -2.17
SFB2P53953 SBH1YER087C-B 249 nt1.51□□□□□ -2.17
SFB2P53953 NUP157YER105C 4176 nt1.51□□□□□ -2.17
SFB2P53953 NUP188YML103C 4968 nt1.49□□□□□ -2.17
SFB2P53953 CDC39YCR093W 6327 nt1.47□□□□□ -2.17
SFB2P53953 YJL127W-AYJL127W-A 117 nt1.47□□□□□ -2.17
SFB2P53953 YLR399W-AYLR399W-A 105 nt1.46□□□□□ -2.18
SFB2P53953 PRP16YKR086W 3216 nt1.44□□□□□ -2.18
SFB2P53953 YDL247W-AYDL247W-A 75 nt1.44□□□□□ -2.18
SFB2P53953 YGR146C-AYGR146C-A 162 nt1.44□□□□□ -2.18
SFB2P53953 KAP120YPL125W 3099 nt1.44□□□□□ -2.18
SFB2P53953 MEC1YBR136W 7107 nt1.44□□□□□ -2.18
SFB2P53953 BEM3YPL115C 3387 nt1.43□□□□□ -2.18
SFB2P53953 COG6YNL041C 2520 nt1.42□□□□□ -2.18
SFB2P53953 YDR210WYDR210W 228 nt1.42□□□□□ -2.18
SFB2P53953 LAA1YJL207C 6045 nt1.41□□□□□ -2.18
SFB2P53953 tH(GUG)E1tH(GUG)E1 72 nt1.41□□□□□ -2.18
SFB2P53953 tH(GUG)E2tH(GUG)E2 72 nt1.41□□□□□ -2.18
SFB2P53953 tH(GUG)G1tH(GUG)G1 72 nt1.41□□□□□ -2.18
SFB2P53953 tH(GUG)G2tH(GUG)G2 72 nt1.41□□□□□ -2.18
SFB2P53953 tH(GUG)HtH(GUG)H 72 nt1.41□□□□□ -2.18
SFB2P53953 tH(GUG)KtH(GUG)K 72 nt1.41□□□□□ -2.18
SFB2P53953 tH(GUG)MtH(GUG)M 72 nt1.41□□□□□ -2.18
SFB2P53953 YGL041C-BYGL041C-B 183 nt1.41□□□□□ -2.18
SFB2P53953 PAU12YGR294W 363 nt1.41□□□□□ -2.18
SFB2P53953 PAU24YBR301W 363 nt1.41□□□□□ -2.18
SFB2P53953 YPR160W-AYPR160W-A 81 nt1.4□□□□□ -2.19
SFB2P53953 YSP1YHR155W 3687 nt1.39□□□□□ -2.19
SFB2P53953 IML1YJR138W 4755 nt1.39□□□□□ -2.19
SFB2P53953 NST1YNL091W 3723 nt1.38□□□□□ -2.19
SFB2P53953 BIR1YJR089W 2865 nt1.37□□□□□ -2.19
SFB2P53953 YDL073WYDL073W 2955 nt1.36□□□□□ -2.19
SFB2P53953 SEC1YDR164C 2175 nt1.35□□□□□ -2.19
SFB2P53953 tN(GUU)QtN(GUU)Q 71 nt1.33□□□□□ -2.2
SFB2P53953 tV(UAC)BtV(UAC)B 74 nt1.33□□□□□ -2.2
SFB2P53953 tV(UAC)DtV(UAC)D 74 nt1.33□□□□□ -2.2
SFB2P53953 YNL266WYNL266W 420 nt1.33□□□□□ -2.2
SFB2P53953 RCO1YMR075W 2055 nt1.33□□□□□ -2.2
SFB2P53953 UBP3YER151C 2739 nt1.32□□□□□ -2.2
SFB2P53953 ULP2YIL031W 3105 nt1.31□□□□□ -2.2
SFB2P53953 GLG1YKR058W 1851 nt1.29□□□□□ -2.2
SFB2P53953 YBR072C-AYBR072C-A 162 nt1.28□□□□□ -2.2
SFB2P53953 YNL284C-BYNL284C-B 5268 nt1.27□□□□□ -2.21
SFB2P53953 YAL037C-AYAL037C-A 93 nt1.24□□□□□ -2.21
SFB2P53953 SIP4YJL089W 2490 nt1.24□□□□□ -2.21
SFB2P53953 EMT1tM(CAU)D 73 nt1.22□□□□□ -2.21
SFB2P53953 EMT5tM(CAU)J1 73 nt1.22□□□□□ -2.21
SFB2P53953 EMT3tM(CAU)J2 73 nt1.22□□□□□ -2.21
SFB2P53953 EMT4tM(CAU)M 73 nt1.22□□□□□ -2.21
SFB2P53953 EMT2tM(CAU)O2 73 nt1.22□□□□□ -2.21
SFB2P53953 snR81snR81 201 nt1.2□□□□□ -2.22
SFB2P53953 YBR196C-AYBR196C-A 150 nt1.2□□□□□ -2.22
SFB2P53953 NNF2YGR089W 2811 nt1.19□□□□□ -2.22
SFB2P53953 SPT7YBR081C 3999 nt1.18□□□□□ -2.22
SFB2P53953 tS(GCU)Q1tS(GCU)Q1 86 nt1.17□□□□□ -2.22
SFB2P53953 SEC10YLR166C 2616 nt1.16□□□□□ -2.22
SFB2P53953 tF(GAA)BtF(GAA)B 73 nt1.16□□□□□ -2.22
SFB2P53953 tF(GAA)FtF(GAA)F 73 nt1.16□□□□□ -2.22
SFB2P53953 tF(GAA)GtF(GAA)G 73 nt1.16□□□□□ -2.22
SFB2P53953 tF(GAA)H1tF(GAA)H1 73 nt1.16□□□□□ -2.22
SFB2P53953 tF(GAA)H2tF(GAA)H2 73 nt1.16□□□□□ -2.22
SFB2P53953 tF(GAA)MtF(GAA)M 73 nt1.16□□□□□ -2.22
SFB2P53953 tF(GAA)P1tF(GAA)P1 73 nt1.16□□□□□ -2.22
SFB2P53953 tF(GAA)P2tF(GAA)P2 73 nt1.16□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 90.4 ms