Protein–RNA interactions for Protein: P53905

LSM7, U6 snRNA-associated Sm-like protein LSm7, yeastyeast

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM7P53905 YJL197C-AYJL197C-A 282 nt-0.43□□□□□ -2.48
LSM7P53905 YLL019W-AYLL019W-A 93 nt-0.43□□□□□ -2.48
LSM7P53905 YOR032W-AYOR032W-A 201 nt-0.43□□□□□ -2.48
LSM7P53905 CSE1YGL238W 2883 nt-0.43□□□□□ -2.48
LSM7P53905 BIL1YOR304C-A 231 nt-0.44□□□□□ -2.48
LSM7P53905 TFB5YDR079C-A 219 nt-0.45□□□□□ -2.48
LSM7P53905 YDR210WYDR210W 228 nt-0.45□□□□□ -2.48
LSM7P53905 AGA2YGL032C 264 nt-0.46□□□□□ -2.48
LSM7P53905 YGR069WYGR069W 336 nt-0.46□□□□□ -2.48
LSM7P53905 PRP39YML046W 1890 nt-0.46□□□□□ -2.48
LSM7P53905 GLG1YKR058W 1851 nt-0.47□□□□□ -2.48
LSM7P53905 YMR193C-AYMR193C-A 387 nt-0.47□□□□□ -2.48
LSM7P53905 YNL324WYNL324W 396 nt-0.47□□□□□ -2.48
LSM7P53905 EST1YLR233C 2100 nt-0.47□□□□□ -2.49
LSM7P53905 YER053C-AYER053C-A 114 nt-0.48□□□□□ -2.49
LSM7P53905 snR60snR60 104 nt-0.5□□□□□ -2.49
LSM7P53905 YPR016W-AYPR016W-A 261 nt-0.5□□□□□ -2.49
LSM7P53905 RAD61YDR014W 1944 nt-0.5□□□□□ -2.49
LSM7P53905 SDH6YDR379C-A 240 nt-0.52□□□□□ -2.49
LSM7P53905 YGR164WYGR164W 336 nt-0.52□□□□□ -2.49
LSM7P53905 YAL068W-AYAL068W-A 255 nt-0.54□□□□□ -2.5
LSM7P53905 YOR072W-BYOR072W-B 162 nt-0.54□□□□□ -2.5
LSM7P53905 YGR035CYGR035C 351 nt-0.56□□□□□ -2.5
LSM7P53905 YAL063C-AYAL063C-A 291 nt-0.56□□□□□ -2.5
LSM7P53905 YJR157WYJR157W 363 nt-0.57□□□□□ -2.5
LSM7P53905 YLR264C-AYLR264C-A 117 nt-0.58□□□□□ -2.5
LSM7P53905 YIL032CYIL032C 357 nt-0.59□□□□□ -2.5
LSM7P53905 YIL002W-AYIL002W-A 210 nt-0.6□□□□□ -2.51
LSM7P53905 APQ12YIL040W 417 nt-0.6□□□□□ -2.51
LSM7P53905 YOR293C-AYOR293C-A 150 nt-0.6□□□□□ -2.51
LSM7P53905 HMRA1YCR097W 381 nt-0.61□□□□□ -2.51
LSM7P53905 snR46snR46 197 nt-0.61□□□□□ -2.51
LSM7P53905 UTP8YGR128C 2142 nt-0.62□□□□□ -2.51
LSM7P53905 HTL1YCR020W-B 237 nt-0.62□□□□□ -2.51
LSM7P53905 YNL028WYNL028W 318 nt-0.62□□□□□ -2.51
LSM7P53905 SEC10YLR166C 2616 nt-0.64□□□□□ -2.51
LSM7P53905 YCR038W-AYCR038W-A 126 nt-0.64□□□□□ -2.51
LSM7P53905 YDR544CYDR544C 429 nt-0.67□□□□□ -2.52
LSM7P53905 Q0017Q0017 162 nt-0.67□□□□□ -2.52
LSM7P53905 URB1YKL014C 5295 nt-0.67□□□□□ -2.52
LSM7P53905 TAH1YCR060W 336 nt-0.68□□□□□ -2.52
LSM7P53905 COG6YNL041C 2520 nt-0.7□□□□□ -2.52
LSM7P53905 YIL071W-AYIL071W-A 477 nt-0.7□□□□□ -2.52
LSM7P53905 YIR030W-AYIR030W-A 384 nt-0.7□□□□□ -2.52
LSM7P53905 YOR015WYOR015W 360 nt-0.7□□□□□ -2.52
LSM7P53905 snR36snR36 182 nt-0.71□□□□□ -2.52
LSM7P53905 YLR154W-FYLR154W-F 141 nt-0.72□□□□□ -2.52
LSM7P53905 YLR120W-AYLR120W-A 102 nt-0.73□□□□□ -2.53
LSM7P53905 YDR102CYDR102C 333 nt-0.75□□□□□ -2.53
LSM7P53905 YPR170W-AYPR170W-A 186 nt-0.75□□□□□ -2.53
LSM7P53905 snR74snR74 88 nt-0.76□□□□□ -2.53
LSM7P53905 ATP6Q0085 780 nt-0.76□□□□□ -2.53
LSM7P53905 YGL149WYGL149W 306 nt-0.76□□□□□ -2.53
LSM7P53905 YDL007C-AYDL007C-A 258 nt-0.78□□□□□ -2.53
LSM7P53905 YAF9YNL107W 681 nt-0.78□□□□□ -2.53
LSM7P53905 YDR183C-AYDR183C-A 258 nt-0.8□□□□□ -2.54
LSM7P53905 YML100W-AYML100W-A 174 nt-0.8□□□□□ -2.54
LSM7P53905 YNL067W-BYNL067W-B 141 nt-0.8□□□□□ -2.54
LSM7P53905 YBL039C-AYBL039C-A 84 nt-0.81□□□□□ -2.54
LSM7P53905 tA(UGC)QtA(UGC)Q 76 nt-0.82□□□□□ -2.54
LSM7P53905 YOR314W-AYOR314W-A 111 nt-0.82□□□□□ -2.54
LSM7P53905 YDR157WYDR157W 402 nt-0.85□□□□□ -2.55
LSM7P53905 YMR172C-AYMR172C-A 384 nt-0.85□□□□□ -2.55
LSM7P53905 RPM2YML091C 3609 nt-0.85□□□□□ -2.55
LSM7P53905 YGL052WYGL052W 306 nt-0.86□□□□□ -2.55
LSM7P53905 YML099W-AYML099W-A 330 nt-0.86□□□□□ -2.55
LSM7P53905 YJL113WYJL113W 4647 nt-0.86□□□□□ -2.55
LSM7P53905 PAU9YBL108C-A 129 nt-0.87□□□□□ -2.55
LSM7P53905 YPL060C-AYPL060C-A 3315 nt-0.87□□□□□ -2.55
LSM7P53905 YPL038W-AYPL038W-A 192 nt-0.88□□□□□ -2.55
LSM7P53905 YJL077W-AYJL077W-A 87 nt-0.89□□□□□ -2.55
LSM7P53905 YLR222C-AYLR222C-A 231 nt-0.89□□□□□ -2.55
LSM7P53905 YGL182CYGL182C 324 nt-0.93□□□□□ -2.56
LSM7P53905 YFL032WYFL032W 321 nt-0.94□□□□□ -2.56
LSM7P53905 YPR197CYPR197C 564 nt-0.94□□□□□ -2.56
LSM7P53905 tQ(UUG)QtQ(UUG)Q 76 nt-0.96□□□□□ -2.56
LSM7P53905 YGL041CYGL041C 204 nt-0.97□□□□□ -2.56
LSM7P53905 YOR008C-AYOR008C-A 225 nt-0.98□□□□□ -2.57
LSM7P53905 YHL009W-BYHL009W-B 5409 nt-0.99□□□□□ -2.57
LSM7P53905 snR33snR33 183 nt-0.99□□□□□ -2.57
LSM7P53905 YPR010C-AYPR010C-A 219 nt-1□□□□□ -2.57
LSM7P53905 YBR182C-AYBR182C-A 195 nt-1□□□□□ -2.57
LSM7P53905 YJL182CYJL182C 318 nt-1.03□□□□□ -2.57
LSM7P53905 snR69snR69 101 nt-1.04□□□□□ -2.58
LSM7P53905 RPL39YJL189W 156 nt-1.04□□□□□ -2.58
LSM7P53905 YDR118W-AYDR118W-A 117 nt-1.05□□□□□ -2.58
LSM7P53905 VAR1Q0140 1197 nt-1.05□□□□□ -2.58
LSM7P53905 YDL240C-AYDL240C-A 138 nt-1.06□□□□□ -2.58
LSM7P53905 snR49snR49 165 nt-1.06□□□□□ -2.58
LSM7P53905 tT(UGU)G1tT(UGU)G1 72 nt-1.07□□□□□ -2.58
LSM7P53905 tT(UGU)G2tT(UGU)G2 72 nt-1.07□□□□□ -2.58
LSM7P53905 tT(UGU)PtT(UGU)P 72 nt-1.07□□□□□ -2.58
LSM7P53905 YER097WYER097W 330 nt-1.08□□□□□ -2.58
LSM7P53905 YDR413CYDR413C 576 nt-1.09□□□□□ -2.58
LSM7P53905 tM(CAU)Q2tM(CAU)Q2 78 nt-1.09□□□□□ -2.58
LSM7P53905 YOR381W-AYOR381W-A 168 nt-1.09□□□□□ -2.58
LSM7P53905 YEL014CYEL014C 306 nt-1.1□□□□□ -2.59
LSM7P53905 YER090C-AYER090C-A 90 nt-1.1□□□□□ -2.59
LSM7P53905 tF(GAA)QtF(GAA)Q 75 nt-1.12□□□□□ -2.59
LSM7P53905 YKL118WYKL118W 312 nt-1.12□□□□□ -2.59
Retrieved 100 of 7,029 protein–RNA pairs in 53.1 ms