Protein–RNA interactions for Protein: P49957

TRM9, tRNA (carboxymethyluridine(34)-5-O)-methyltransferase, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM9P49957 BIL1YOR304C-A 231 nt-0.2□□□□□ -2.44
TRM9P49957 YDR048CYDR048C 315 nt-0.21□□□□□ -2.44
TRM9P49957 YDR366CYDR366C 399 nt-0.21□□□□□ -2.44
TRM9P49957 YFL063WYFL063W 456 nt-0.22□□□□□ -2.44
TRM9P49957 tW(UCA)QtW(UCA)Q 74 nt-0.22□□□□□ -2.44
TRM9P49957 YAL063C-AYAL063C-A 291 nt-0.24□□□□□ -2.45
TRM9P49957 YLR264C-AYLR264C-A 117 nt-0.24□□□□□ -2.45
TRM9P49957 Q0017Q0017 162 nt-0.24□□□□□ -2.45
TRM9P49957 snR8snR8 190 nt-0.25□□□□□ -2.45
TRM9P49957 YGR164WYGR164W 336 nt-0.26□□□□□ -2.45
TRM9P49957 YJL197C-AYJL197C-A 282 nt-0.26□□□□□ -2.45
TRM9P49957 YAL068W-AYAL068W-A 255 nt-0.26□□□□□ -2.45
TRM9P49957 snR128snR128 126 nt-0.26□□□□□ -2.45
TRM9P49957 YBR072C-AYBR072C-A 162 nt-0.26□□□□□ -2.45
TRM9P49957 YGR035CYGR035C 351 nt-0.29□□□□□ -2.46
TRM9P49957 YMR158W-BYMR158W-B 321 nt-0.3□□□□□ -2.46
TRM9P49957 YJR157WYJR157W 363 nt-0.31□□□□□ -2.46
TRM9P49957 YLL019W-AYLL019W-A 93 nt-0.31□□□□□ -2.46
TRM9P49957 YMR193C-AYMR193C-A 387 nt-0.33□□□□□ -2.46
TRM9P49957 YBR099CYBR099C 384 nt-0.33□□□□□ -2.46
TRM9P49957 snR60snR60 104 nt-0.34□□□□□ -2.46
TRM9P49957 YGR069WYGR069W 336 nt-0.34□□□□□ -2.46
TRM9P49957 GLG1YKR058W 1851 nt-0.34□□□□□ -2.46
TRM9P49957 YPR016W-AYPR016W-A 261 nt-0.35□□□□□ -2.47
TRM9P49957 HTL1YCR020W-B 237 nt-0.37□□□□□ -2.47
TRM9P49957 YOR072W-BYOR072W-B 162 nt-0.37□□□□□ -2.47
TRM9P49957 YER053C-AYER053C-A 114 nt-0.38□□□□□ -2.47
TRM9P49957 YOR293C-AYOR293C-A 150 nt-0.38□□□□□ -2.47
TRM9P49957 snR46snR46 197 nt-0.38□□□□□ -2.47
TRM9P49957 SBH2YER019C-A 267 nt-0.39□□□□□ -2.47
TRM9P49957 YIL032CYIL032C 357 nt-0.4□□□□□ -2.47
TRM9P49957 YLR154W-FYLR154W-F 141 nt-0.4□□□□□ -2.47
TRM9P49957 URB1YKL014C 5295 nt-0.4□□□□□ -2.47
TRM9P49957 EST1YLR233C 2100 nt-0.43□□□□□ -2.48
TRM9P49957 YNL028WYNL028W 318 nt-0.43□□□□□ -2.48
TRM9P49957 RAD61YDR014W 1944 nt-0.44□□□□□ -2.48
TRM9P49957 SDH6YDR379C-A 240 nt-0.44□□□□□ -2.48
TRM9P49957 YIL002W-AYIL002W-A 210 nt-0.45□□□□□ -2.48
TRM9P49957 SEC10YLR166C 2616 nt-0.46□□□□□ -2.48
TRM9P49957 HMRA1YCR097W 381 nt-0.48□□□□□ -2.49
TRM9P49957 YPR170W-AYPR170W-A 186 nt-0.48□□□□□ -2.49
TRM9P49957 APQ12YIL040W 417 nt-0.49□□□□□ -2.49
TRM9P49957 RPM2YML091C 3609 nt-0.5□□□□□ -2.49
TRM9P49957 YIR030W-AYIR030W-A 384 nt-0.51□□□□□ -2.49
TRM9P49957 YDR102CYDR102C 333 nt-0.52□□□□□ -2.49
TRM9P49957 YGL149WYGL149W 306 nt-0.52□□□□□ -2.49
TRM9P49957 YDR157WYDR157W 402 nt-0.53□□□□□ -2.49
TRM9P49957 YDR183C-AYDR183C-A 258 nt-0.53□□□□□ -2.49
TRM9P49957 YLR222C-AYLR222C-A 231 nt-0.53□□□□□ -2.49
TRM9P49957 YCR038W-AYCR038W-A 126 nt-0.54□□□□□ -2.5
TRM9P49957 YLR120W-AYLR120W-A 102 nt-0.54□□□□□ -2.5
TRM9P49957 YAF9YNL107W 681 nt-0.56□□□□□ -2.5
TRM9P49957 YOR015WYOR015W 360 nt-0.56□□□□□ -2.5
TRM9P49957 COG6YNL041C 2520 nt-0.59□□□□□ -2.5
TRM9P49957 YPL038W-AYPL038W-A 192 nt-0.59□□□□□ -2.5
TRM9P49957 ATP6Q0085 780 nt-0.62□□□□□ -2.51
TRM9P49957 YDR544CYDR544C 429 nt-0.62□□□□□ -2.51
TRM9P49957 snR36snR36 182 nt-0.62□□□□□ -2.51
TRM9P49957 snR74snR74 88 nt-0.63□□□□□ -2.51
TRM9P49957 YMR172C-AYMR172C-A 384 nt-0.65□□□□□ -2.51
TRM9P49957 YGL052WYGL052W 306 nt-0.67□□□□□ -2.52
TRM9P49957 YIL071W-AYIL071W-A 477 nt-0.68□□□□□ -2.52
TRM9P49957 YPR197CYPR197C 564 nt-0.68□□□□□ -2.52
TRM9P49957 VAR1Q0140 1197 nt-0.7□□□□□ -2.52
TRM9P49957 YBL039C-AYBL039C-A 84 nt-0.7□□□□□ -2.52
TRM9P49957 YOR314W-AYOR314W-A 111 nt-0.7□□□□□ -2.52
TRM9P49957 YPL060C-AYPL060C-A 3315 nt-0.71□□□□□ -2.52
TRM9P49957 tT(UGU)G1tT(UGU)G1 72 nt-0.71□□□□□ -2.52
TRM9P49957 tT(UGU)G2tT(UGU)G2 72 nt-0.71□□□□□ -2.52
TRM9P49957 tT(UGU)PtT(UGU)P 72 nt-0.71□□□□□ -2.52
TRM9P49957 YNL067W-BYNL067W-B 141 nt-0.72□□□□□ -2.52
TRM9P49957 YDR118W-AYDR118W-A 117 nt-0.73□□□□□ -2.53
TRM9P49957 YOR008C-AYOR008C-A 225 nt-0.73□□□□□ -2.53
TRM9P49957 YFL032WYFL032W 321 nt-0.74□□□□□ -2.53
TRM9P49957 YJL077W-AYJL077W-A 87 nt-0.74□□□□□ -2.53
TRM9P49957 RPL39YJL189W 156 nt-0.74□□□□□ -2.53
TRM9P49957 YML100W-AYML100W-A 174 nt-0.74□□□□□ -2.53
TRM9P49957 YDL007C-AYDL007C-A 258 nt-0.75□□□□□ -2.53
TRM9P49957 YHL009W-BYHL009W-B 5409 nt-0.75□□□□□ -2.53
TRM9P49957 YML099W-AYML099W-A 330 nt-0.76□□□□□ -2.53
TRM9P49957 YDL240C-AYDL240C-A 138 nt-0.78□□□□□ -2.53
TRM9P49957 tA(UGC)QtA(UGC)Q 76 nt-0.79□□□□□ -2.54
TRM9P49957 snR33snR33 183 nt-0.79□□□□□ -2.54
TRM9P49957 YGL182CYGL182C 324 nt-0.8□□□□□ -2.54
TRM9P49957 YPR012WYPR012W 255 nt-0.8□□□□□ -2.54
TRM9P49957 YBR182C-AYBR182C-A 195 nt-0.81□□□□□ -2.54
TRM9P49957 snR161snR161 161 nt-0.83□□□□□ -2.54
TRM9P49957 YGL041CYGL041C 204 nt-0.84□□□□□ -2.54
TRM9P49957 YDR413CYDR413C 576 nt-0.85□□□□□ -2.55
TRM9P49957 YKL118WYKL118W 312 nt-0.85□□□□□ -2.55
TRM9P49957 YER097WYER097W 330 nt-0.87□□□□□ -2.55
TRM9P49957 PAU9YBL108C-A 129 nt-0.87□□□□□ -2.55
TRM9P49957 Q0144Q0144 330 nt-0.89□□□□□ -2.55
TRM9P49957 tQ(UUG)QtQ(UUG)Q 76 nt-0.9□□□□□ -2.55
TRM9P49957 GIM4YEL003W 336 nt-0.91□□□□□ -2.56
TRM9P49957 YFL019CYFL019C 354 nt-0.91□□□□□ -2.56
TRM9P49957 tF(GAA)QtF(GAA)Q 75 nt-0.92□□□□□ -2.56
TRM9P49957 YER181CYER181C 324 nt-0.93□□□□□ -2.56
TRM9P49957 YPR010C-AYPR010C-A 219 nt-0.93□□□□□ -2.56
TRM9P49957 YNL277W-AYNL277W-A 189 nt-0.94□□□□□ -2.56
Retrieved 100 of 7,029 protein–RNA pairs in 58.3 ms