Protein–RNA interactions for Protein: P47153

TDA4, Topoisomerase I damage affected protein 4, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA4P47153 tW(UCA)QtW(UCA)Q 74 nt-0.52□□□□□ -2.49
TDA4P47153 YLL019W-AYLL019W-A 93 nt-0.53□□□□□ -2.49
TDA4P47153 YLR202CYLR202C 327 nt-0.53□□□□□ -2.49
TDA4P47153 YJL197C-AYJL197C-A 282 nt-0.54□□□□□ -2.5
TDA4P47153 RAD61YDR014W 1944 nt-0.54□□□□□ -2.5
TDA4P47153 YOR121CYOR121C 306 nt-0.55□□□□□ -2.5
TDA4P47153 GLG1YKR058W 1851 nt-0.56□□□□□ -2.5
TDA4P47153 YKL063CYKL063C 504 nt-0.56□□□□□ -2.5
TDA4P47153 YMR001C-AYMR001C-A 231 nt-0.56□□□□□ -2.5
TDA4P47153 snR189snR189 189 nt-0.56□□□□□ -2.5
TDA4P47153 YBR285WYBR285W 435 nt-0.56□□□□□ -2.5
TDA4P47153 URB1YKL014C 5295 nt-0.56□□□□□ -2.5
TDA4P47153 SEC10YLR166C 2616 nt-0.56□□□□□ -2.5
TDA4P47153 YER053C-AYER053C-A 114 nt-0.57□□□□□ -2.5
TDA4P47153 YGR069WYGR069W 336 nt-0.57□□□□□ -2.5
TDA4P47153 SDH6YDR379C-A 240 nt-0.58□□□□□ -2.5
TDA4P47153 YMR193C-AYMR193C-A 387 nt-0.58□□□□□ -2.5
TDA4P47153 YAL016C-BYAL016C-B 186 nt-0.59□□□□□ -2.5
TDA4P47153 YPR170W-AYPR170W-A 186 nt-0.59□□□□□ -2.5
TDA4P47153 YJL113WYJL113W 4647 nt-0.59□□□□□ -2.5
TDA4P47153 YER079WYER079W 633 nt-0.61□□□□□ -2.51
TDA4P47153 YPR016W-AYPR016W-A 261 nt-0.61□□□□□ -2.51
TDA4P47153 snR60snR60 104 nt-0.62□□□□□ -2.51
TDA4P47153 AGA2YGL032C 264 nt-0.62□□□□□ -2.51
TDA4P47153 YIR030W-AYIR030W-A 384 nt-0.62□□□□□ -2.51
TDA4P47153 BIL1YOR304C-A 231 nt-0.64□□□□□ -2.51
TDA4P47153 YLR264C-AYLR264C-A 117 nt-0.65□□□□□ -2.51
TDA4P47153 YOR072W-BYOR072W-B 162 nt-0.67□□□□□ -2.52
TDA4P47153 APQ12YIL040W 417 nt-0.68□□□□□ -2.52
TDA4P47153 YDR544CYDR544C 429 nt-0.7□□□□□ -2.52
TDA4P47153 YIL071W-AYIL071W-A 477 nt-0.71□□□□□ -2.52
TDA4P47153 YCR038W-AYCR038W-A 126 nt-0.72□□□□□ -2.52
TDA4P47153 HMRA1YCR097W 381 nt-0.72□□□□□ -2.52
TDA4P47153 YIL002W-AYIL002W-A 210 nt-0.72□□□□□ -2.52
TDA4P47153 YIL032CYIL032C 357 nt-0.73□□□□□ -2.53
TDA4P47153 YDL007C-AYDL007C-A 258 nt-0.76□□□□□ -2.53
TDA4P47153 YGR035CYGR035C 351 nt-0.76□□□□□ -2.53
TDA4P47153 YNL067W-BYNL067W-B 141 nt-0.76□□□□□ -2.53
TDA4P47153 YNL324WYNL324W 396 nt-0.76□□□□□ -2.53
TDA4P47153 snR36snR36 182 nt-0.76□□□□□ -2.53
TDA4P47153 TAH1YCR060W 336 nt-0.77□□□□□ -2.53
TDA4P47153 YAL068W-AYAL068W-A 255 nt-0.77□□□□□ -2.53
TDA4P47153 COG6YNL041C 2520 nt-0.77□□□□□ -2.53
TDA4P47153 YJR157WYJR157W 363 nt-0.78□□□□□ -2.53
TDA4P47153 YNL028WYNL028W 318 nt-0.79□□□□□ -2.54
TDA4P47153 HTL1YCR020W-B 237 nt-0.8□□□□□ -2.54
TDA4P47153 YOR015WYOR015W 360 nt-0.8□□□□□ -2.54
TDA4P47153 YAL063C-AYAL063C-A 291 nt-0.82□□□□□ -2.54
TDA4P47153 YOR293C-AYOR293C-A 150 nt-0.82□□□□□ -2.54
TDA4P47153 tA(UGC)QtA(UGC)Q 76 nt-0.84□□□□□ -2.54
TDA4P47153 YML100W-AYML100W-A 174 nt-0.85□□□□□ -2.55
TDA4P47153 snR74snR74 88 nt-0.86□□□□□ -2.55
TDA4P47153 PAU9YBL108C-A 129 nt-0.86□□□□□ -2.55
TDA4P47153 YHL009W-BYHL009W-B 5409 nt-0.87□□□□□ -2.55
TDA4P47153 RPM2YML091C 3609 nt-0.88□□□□□ -2.55
TDA4P47153 YGL149WYGL149W 306 nt-0.88□□□□□ -2.55
TDA4P47153 YLR120W-AYLR120W-A 102 nt-0.88□□□□□ -2.55
TDA4P47153 ATP6Q0085 780 nt-0.89□□□□□ -2.55
TDA4P47153 snR33snR33 183 nt-0.89□□□□□ -2.55
TDA4P47153 YML099W-AYML099W-A 330 nt-0.91□□□□□ -2.56
TDA4P47153 YBL039C-AYBL039C-A 84 nt-0.91□□□□□ -2.56
TDA4P47153 YGL052WYGL052W 306 nt-0.93□□□□□ -2.56
TDA4P47153 YAF9YNL107W 681 nt-0.93□□□□□ -2.56
TDA4P47153 YOR314W-AYOR314W-A 111 nt-0.93□□□□□ -2.56
TDA4P47153 YDR102CYDR102C 333 nt-0.95□□□□□ -2.56
TDA4P47153 tT(UGU)G1tT(UGU)G1 72 nt-0.97□□□□□ -2.56
TDA4P47153 tT(UGU)G2tT(UGU)G2 72 nt-0.97□□□□□ -2.56
TDA4P47153 tT(UGU)PtT(UGU)P 72 nt-0.97□□□□□ -2.56
TDA4P47153 YJL077W-AYJL077W-A 87 nt-0.97□□□□□ -2.56
TDA4P47153 YLR154W-FYLR154W-F 141 nt-0.98□□□□□ -2.57
TDA4P47153 YDR183C-AYDR183C-A 258 nt-1.01□□□□□ -2.57
TDA4P47153 tQ(UUG)QtQ(UUG)Q 76 nt-1.01□□□□□ -2.57
TDA4P47153 YMR172C-AYMR172C-A 384 nt-1.02□□□□□ -2.57
TDA4P47153 YGL182CYGL182C 324 nt-1.03□□□□□ -2.57
TDA4P47153 YPR010C-AYPR010C-A 219 nt-1.03□□□□□ -2.57
TDA4P47153 Q0017Q0017 162 nt-1.03□□□□□ -2.57
TDA4P47153 YPL060C-AYPL060C-A 3315 nt-1.04□□□□□ -2.58
TDA4P47153 YFL032WYFL032W 321 nt-1.04□□□□□ -2.58
TDA4P47153 YJL182CYJL182C 318 nt-1.05□□□□□ -2.58
TDA4P47153 YGL041CYGL041C 204 nt-1.07□□□□□ -2.58
TDA4P47153 snR49snR49 165 nt-1.07□□□□□ -2.58
TDA4P47153 snR69snR69 101 nt-1.09□□□□□ -2.58
TDA4P47153 YPL038W-AYPL038W-A 192 nt-1.09□□□□□ -2.58
TDA4P47153 YDR157WYDR157W 402 nt-1.11□□□□□ -2.59
TDA4P47153 YOR170WYOR170W 306 nt-1.12□□□□□ -2.59
TDA4P47153 YBR182C-AYBR182C-A 195 nt-1.15□□□□□ -2.59
TDA4P47153 YLR222C-AYLR222C-A 231 nt-1.16□□□□□ -2.6
TDA4P47153 YPR197CYPR197C 564 nt-1.16□□□□□ -2.6
TDA4P47153 YER097WYER097W 330 nt-1.17□□□□□ -2.6
TDA4P47153 YOR008C-AYOR008C-A 225 nt-1.17□□□□□ -2.6
TDA4P47153 snR50snR50 90 nt-1.17□□□□□ -2.6
TDA4P47153 YEL014CYEL014C 306 nt-1.18□□□□□ -2.6
TDA4P47153 YER090C-AYER090C-A 90 nt-1.18□□□□□ -2.6
TDA4P47153 tM(CAU)Q2tM(CAU)Q2 78 nt-1.18□□□□□ -2.6
TDA4P47153 YNL266WYNL266W 420 nt-1.18□□□□□ -2.6
TDA4P47153 snR161snR161 161 nt-1.2□□□□□ -2.6
TDA4P47153 RDS3YPR094W 324 nt-1.2□□□□□ -2.6
TDA4P47153 YOR381W-AYOR381W-A 168 nt-1.21□□□□□ -2.6
TDA4P47153 YBR223W-AYBR223W-A 120 nt-1.21□□□□□ -2.6
TDA4P47153 YFL019CYFL019C 354 nt-1.25□□□□□ -2.61
Retrieved 100 of 7,029 protein–RNA pairs in 93 ms