Protein–RNA interactions for Protein: P47142

VPS25, Vacuolar protein-sorting-associated protein 25, yeastyeast

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS25P47142 YLR282CYLR282C 342 nt1.2□□□□□ -2.22
VPS25P47142 YBR200W-AYBR200W-A 165 nt1.2□□□□□ -2.22
VPS25P47142 PRP5YBR237W 2550 nt1.19□□□□□ -2.22
VPS25P47142 GEA2YEL022W 4380 nt1.19□□□□□ -2.22
VPS25P47142 KAP120YPL125W 3099 nt1.19□□□□□ -2.22
VPS25P47142 SPT7YBR081C 3999 nt1.18□□□□□ -2.22
VPS25P47142 YLR041WYLR041W 321 nt1.18□□□□□ -2.22
VPS25P47142 UBP3YER151C 2739 nt1.17□□□□□ -2.22
VPS25P47142 snR48snR48 113 nt1.17□□□□□ -2.22
VPS25P47142 SMC1YFL008W 3678 nt1.17□□□□□ -2.22
VPS25P47142 YOR102WYOR102W 351 nt1.16□□□□□ -2.22
VPS25P47142 SNU13YEL026W 381 nt1.15□□□□□ -2.23
VPS25P47142 YKL100W-AYKL100W-A 90 nt1.15□□□□□ -2.23
VPS25P47142 snR190snR190 190 nt1.15□□□□□ -2.23
VPS25P47142 ROM2YLR371W 4071 nt1.15□□□□□ -2.23
VPS25P47142 tL(UAA)QtL(UAA)Q 85 nt1.14□□□□□ -2.23
VPS25P47142 YGL182CYGL182C 324 nt1.14□□□□□ -2.23
VPS25P47142 RPL26BYGR034W 384 nt1.14□□□□□ -2.23
VPS25P47142 YHL015W-AYHL015W-A 84 nt1.14□□□□□ -2.23
VPS25P47142 YBL039C-AYBL039C-A 84 nt1.14□□□□□ -2.23
VPS25P47142 YML002WYML002W 2214 nt1.13□□□□□ -2.23
VPS25P47142 PRP16YKR086W 3216 nt1.12□□□□□ -2.23
VPS25P47142 BUD3YCL014W 4911 nt1.11□□□□□ -2.23
VPS25P47142 SEC21YNL287W 2808 nt1.11□□□□□ -2.23
VPS25P47142 FYV10YIL097W 1551 nt1.11□□□□□ -2.23
VPS25P47142 YIL020C-AYIL020C-A 339 nt1.1□□□□□ -2.23
VPS25P47142 UTP8YGR128C 2142 nt1.1□□□□□ -2.23
VPS25P47142 TAH1YCR060W 336 nt1.09□□□□□ -2.23
VPS25P47142 YOR314W-AYOR314W-A 111 nt1.09□□□□□ -2.23
VPS25P47142 BEM2YER155C 6504 nt1.06□□□□□ -2.24
VPS25P47142 SEC8YPR055W 3198 nt1.05□□□□□ -2.24
VPS25P47142 YPR160W-AYPR160W-A 81 nt1.05□□□□□ -2.24
VPS25P47142 CHS6YJL099W 2241 nt1.04□□□□□ -2.24
VPS25P47142 YOR329W-AYOR329W-A 210 nt1.04□□□□□ -2.24
VPS25P47142 RAD9YDR217C 3930 nt1.04□□□□□ -2.24
VPS25P47142 NST1YNL091W 3723 nt1.03□□□□□ -2.24
VPS25P47142 tN(GUU)QtN(GUU)Q 71 nt1.03□□□□□ -2.24
VPS25P47142 Q0143Q0143 153 nt1.02□□□□□ -2.25
VPS25P47142 snR39BsnR39B 96 nt1.02□□□□□ -2.25
VPS25P47142 YDL073WYDL073W 2955 nt1.01□□□□□ -2.25
VPS25P47142 YLR232WYLR232W 348 nt1.01□□□□□ -2.25
VPS25P47142 YLR399W-AYLR399W-A 105 nt1.01□□□□□ -2.25
VPS25P47142 PAU12YGR294W 363 nt1□□□□□ -2.25
VPS25P47142 YHR131W-AYHR131W-A 246 nt1□□□□□ -2.25
VPS25P47142 PAU24YBR301W 363 nt1□□□□□ -2.25
VPS25P47142 YCL001W-BYCL001W-B 255 nt0.99□□□□□ -2.25
VPS25P47142 UTP20YBL004W 7482 nt0.98□□□□□ -2.25
VPS25P47142 YDR544CYDR544C 429 nt0.97□□□□□ -2.25
VPS25P47142 YIL071W-AYIL071W-A 477 nt0.97□□□□□ -2.25
VPS25P47142 YPR117WYPR117W 7470 nt0.97□□□□□ -2.25
VPS25P47142 COG6YNL041C 2520 nt0.96□□□□□ -2.26
VPS25P47142 YJR029WYJR029W 5268 nt0.96□□□□□ -2.26
VPS25P47142 YPR137C-BYPR137C-B 5268 nt0.96□□□□□ -2.26
VPS25P47142 QCR9YGR183C 201 nt0.96□□□□□ -2.26
VPS25P47142 RPM2YML091C 3609 nt0.95□□□□□ -2.26
VPS25P47142 OST4YDL232W 111 nt0.94□□□□□ -2.26
VPS25P47142 tF(GAA)BtF(GAA)B 73 nt0.94□□□□□ -2.26
VPS25P47142 tF(GAA)FtF(GAA)F 73 nt0.94□□□□□ -2.26
VPS25P47142 tF(GAA)GtF(GAA)G 73 nt0.94□□□□□ -2.26
VPS25P47142 tF(GAA)H1tF(GAA)H1 73 nt0.94□□□□□ -2.26
VPS25P47142 tF(GAA)H2tF(GAA)H2 73 nt0.94□□□□□ -2.26
VPS25P47142 tF(GAA)MtF(GAA)M 73 nt0.94□□□□□ -2.26
VPS25P47142 tF(GAA)P1tF(GAA)P1 73 nt0.94□□□□□ -2.26
VPS25P47142 tF(GAA)P2tF(GAA)P2 73 nt0.94□□□□□ -2.26
VPS25P47142 YIL142C-AYIL142C-A 333 nt0.94□□□□□ -2.26
VPS25P47142 YNL067W-BYNL067W-B 141 nt0.94□□□□□ -2.26
VPS25P47142 RKR1YMR247C 4689 nt0.94□□□□□ -2.26
VPS25P47142 SEC1YDR164C 2175 nt0.93□□□□□ -2.26
VPS25P47142 YDR210WYDR210W 228 nt0.92□□□□□ -2.26
VPS25P47142 YSP1YHR155W 3687 nt0.9□□□□□ -2.27
VPS25P47142 tM(CAU)Q2tM(CAU)Q2 78 nt0.89□□□□□ -2.27
VPS25P47142 SCC2YDR180W 4482 nt0.89□□□□□ -2.27
VPS25P47142 VAM6YDL077C 3150 nt0.89□□□□□ -2.27
VPS25P47142 DOP1YDR141C 5097 nt0.89□□□□□ -2.27
VPS25P47142 YCR095W-AYCR095W-A 159 nt0.87□□□□□ -2.27
VPS25P47142 EMT1tM(CAU)D 73 nt0.87□□□□□ -2.27
VPS25P47142 EMT5tM(CAU)J1 73 nt0.87□□□□□ -2.27
VPS25P47142 EMT3tM(CAU)J2 73 nt0.87□□□□□ -2.27
VPS25P47142 EMT4tM(CAU)M 73 nt0.87□□□□□ -2.27
VPS25P47142 EMT2tM(CAU)O2 73 nt0.87□□□□□ -2.27
VPS25P47142 YMR160WYMR160W 2451 nt0.86□□□□□ -2.27
VPS25P47142 YPL060C-AYPL060C-A 3315 nt0.86□□□□□ -2.27
VPS25P47142 snR85snR85 171 nt0.85□□□□□ -2.27
VPS25P47142 SOM1YEL059C-A 225 nt0.85□□□□□ -2.27
VPS25P47142 YNL205CYNL205C 423 nt0.84□□□□□ -2.27
VPS25P47142 BEM3YPL115C 3387 nt0.84□□□□□ -2.28
VPS25P47142 ULP2YIL031W 3105 nt0.84□□□□□ -2.28
VPS25P47142 YGR146C-AYGR146C-A 162 nt0.83□□□□□ -2.28
VPS25P47142 YBR072C-AYBR072C-A 162 nt0.83□□□□□ -2.28
VPS25P47142 YBR099CYBR099C 384 nt0.83□□□□□ -2.28
VPS25P47142 YJL127W-AYJL127W-A 117 nt0.82□□□□□ -2.28
VPS25P47142 GLG1YKR058W 1851 nt0.81□□□□□ -2.28
VPS25P47142 NNF2YGR089W 2811 nt0.81□□□□□ -2.28
VPS25P47142 BUL2YML111W 2763 nt0.79□□□□□ -2.28
VPS25P47142 RCO1YMR075W 2055 nt0.78□□□□□ -2.28
VPS25P47142 MYO1YHR023W 5787 nt0.77□□□□□ -2.29
VPS25P47142 BIR1YJR089W 2865 nt0.76□□□□□ -2.29
VPS25P47142 tT(AGU)BtT(AGU)B 73 nt0.76□□□□□ -2.29
VPS25P47142 tT(AGU)CtT(AGU)C 73 nt0.76□□□□□ -2.29
VPS25P47142 tT(AGU)DtT(AGU)D 73 nt0.76□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 30.3 ms