Protein–RNA interactions for Protein: P43558

OTU1, Ubiquitin thioesterase OTU1, yeastyeast

Predictions only

Length 301 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
OTU1P43558 snR189snR189 189 nt-0.53□□□□□ -2.49
OTU1P43558 snR46snR46 197 nt-0.53□□□□□ -2.49
OTU1P43558 YFL063WYFL063W 456 nt-0.54□□□□□ -2.5
OTU1P43558 YIL115W-AYIL115W-A 372 nt-0.54□□□□□ -2.5
OTU1P43558 UTP8YGR128C 2142 nt-0.55□□□□□ -2.5
OTU1P43558 YDL007C-AYDL007C-A 258 nt-0.58□□□□□ -2.5
OTU1P43558 YOR121CYOR121C 306 nt-0.58□□□□□ -2.5
OTU1P43558 YER137W-AYER137W-A 306 nt-0.59□□□□□ -2.5
OTU1P43558 YLR264C-AYLR264C-A 117 nt-0.59□□□□□ -2.5
OTU1P43558 YDR048CYDR048C 315 nt-0.6□□□□□ -2.51
OTU1P43558 YIL071W-AYIL071W-A 477 nt-0.6□□□□□ -2.51
OTU1P43558 RPM2YML091C 3609 nt-0.6□□□□□ -2.51
OTU1P43558 GLG1YKR058W 1851 nt-0.61□□□□□ -2.51
OTU1P43558 URB1YKL014C 5295 nt-0.61□□□□□ -2.51
OTU1P43558 YAL016C-BYAL016C-B 186 nt-0.61□□□□□ -2.51
OTU1P43558 YJL197C-AYJL197C-A 282 nt-0.61□□□□□ -2.51
OTU1P43558 YBR285WYBR285W 435 nt-0.61□□□□□ -2.51
OTU1P43558 YPR170W-AYPR170W-A 186 nt-0.63□□□□□ -2.51
OTU1P43558 YJL113WYJL113W 4647 nt-0.63□□□□□ -2.51
OTU1P43558 YLL019W-AYLL019W-A 93 nt-0.64□□□□□ -2.51
OTU1P43558 YMR001C-AYMR001C-A 231 nt-0.64□□□□□ -2.51
OTU1P43558 SDH6YDR379C-A 240 nt-0.65□□□□□ -2.51
OTU1P43558 tW(UCA)QtW(UCA)Q 74 nt-0.65□□□□□ -2.51
OTU1P43558 YMR193C-AYMR193C-A 387 nt-0.65□□□□□ -2.51
OTU1P43558 snR33snR33 183 nt-0.65□□□□□ -2.51
OTU1P43558 tA(UGC)QtA(UGC)Q 76 nt-0.66□□□□□ -2.52
OTU1P43558 BIL1YOR304C-A 231 nt-0.67□□□□□ -2.52
OTU1P43558 AGA2YGL032C 264 nt-0.68□□□□□ -2.52
OTU1P43558 YER053C-AYER053C-A 114 nt-0.69□□□□□ -2.52
OTU1P43558 YER079WYER079W 633 nt-0.69□□□□□ -2.52
OTU1P43558 YGR069WYGR069W 336 nt-0.69□□□□□ -2.52
OTU1P43558 tT(UGU)G1tT(UGU)G1 72 nt-0.69□□□□□ -2.52
OTU1P43558 tT(UGU)G2tT(UGU)G2 72 nt-0.69□□□□□ -2.52
OTU1P43558 tT(UGU)PtT(UGU)P 72 nt-0.69□□□□□ -2.52
OTU1P43558 PAU9YBL108C-A 129 nt-0.7□□□□□ -2.52
OTU1P43558 YML100W-AYML100W-A 174 nt-0.73□□□□□ -2.53
OTU1P43558 snR60snR60 104 nt-0.74□□□□□ -2.53
OTU1P43558 YDR544CYDR544C 429 nt-0.74□□□□□ -2.53
OTU1P43558 YPR016W-AYPR016W-A 261 nt-0.74□□□□□ -2.53
OTU1P43558 YOR072W-BYOR072W-B 162 nt-0.75□□□□□ -2.53
OTU1P43558 YLR154W-FYLR154W-F 141 nt-0.76□□□□□ -2.53
OTU1P43558 YNL324WYNL324W 396 nt-0.76□□□□□ -2.53
OTU1P43558 snR36snR36 182 nt-0.77□□□□□ -2.53
OTU1P43558 APQ12YIL040W 417 nt-0.78□□□□□ -2.53
OTU1P43558 YPL060C-AYPL060C-A 3315 nt-0.79□□□□□ -2.54
OTU1P43558 YIL002W-AYIL002W-A 210 nt-0.81□□□□□ -2.54
OTU1P43558 YAL063C-AYAL063C-A 291 nt-0.81□□□□□ -2.54
OTU1P43558 YOR170WYOR170W 306 nt-0.81□□□□□ -2.54
OTU1P43558 COG6YNL041C 2520 nt-0.84□□□□□ -2.54
OTU1P43558 YCR038W-AYCR038W-A 126 nt-0.84□□□□□ -2.54
OTU1P43558 HMRA1YCR097W 381 nt-0.85□□□□□ -2.55
OTU1P43558 YGL052WYGL052W 306 nt-0.85□□□□□ -2.55
OTU1P43558 YGR035CYGR035C 351 nt-0.85□□□□□ -2.55
OTU1P43558 YIL032CYIL032C 357 nt-0.85□□□□□ -2.55
OTU1P43558 YJL182CYJL182C 318 nt-0.85□□□□□ -2.55
OTU1P43558 YAL068W-AYAL068W-A 255 nt-0.85□□□□□ -2.55
OTU1P43558 snR161snR161 161 nt-0.86□□□□□ -2.55
OTU1P43558 TAH1YCR060W 336 nt-0.87□□□□□ -2.55
OTU1P43558 YNL028WYNL028W 318 nt-0.87□□□□□ -2.55
OTU1P43558 snR49snR49 165 nt-0.88□□□□□ -2.55
OTU1P43558 HTL1YCR020W-B 237 nt-0.89□□□□□ -2.55
OTU1P43558 YPR010C-AYPR010C-A 219 nt-0.89□□□□□ -2.55
OTU1P43558 tP(UGG)QtP(UGG)Q 72 nt-0.91□□□□□ -2.56
OTU1P43558 YML099W-AYML099W-A 330 nt-0.91□□□□□ -2.56
OTU1P43558 YGL182CYGL182C 324 nt-0.92□□□□□ -2.56
OTU1P43558 tQ(UUG)QtQ(UUG)Q 76 nt-0.93□□□□□ -2.56
OTU1P43558 YJR157WYJR157W 363 nt-0.95□□□□□ -2.56
OTU1P43558 YAF9YNL107W 681 nt-0.96□□□□□ -2.56
OTU1P43558 YOR293C-AYOR293C-A 150 nt-0.96□□□□□ -2.56
OTU1P43558 YHL009W-BYHL009W-B 5409 nt-0.96□□□□□ -2.56
OTU1P43558 YBL039C-AYBL039C-A 84 nt-0.98□□□□□ -2.57
OTU1P43558 YOR314W-AYOR314W-A 111 nt-0.98□□□□□ -2.57
OTU1P43558 snR50snR50 90 nt-0.98□□□□□ -2.57
OTU1P43558 YGL149WYGL149W 306 nt-0.99□□□□□ -2.57
OTU1P43558 YOR015WYOR015W 360 nt-0.99□□□□□ -2.57
OTU1P43558 YJL077W-AYJL077W-A 87 nt-1□□□□□ -2.57
OTU1P43558 JLP2YMR132C 627 nt-1□□□□□ -2.57
OTU1P43558 YNL266WYNL266W 420 nt-1□□□□□ -2.57
OTU1P43558 snR69snR69 101 nt-1.02□□□□□ -2.57
OTU1P43558 snR74snR74 88 nt-1.02□□□□□ -2.57
OTU1P43558 YLR120W-AYLR120W-A 102 nt-1.03□□□□□ -2.57
OTU1P43558 YER090C-AYER090C-A 90 nt-1.05□□□□□ -2.58
OTU1P43558 YBR223W-AYBR223W-A 120 nt-1.06□□□□□ -2.58
OTU1P43558 Q0017Q0017 162 nt-1.06□□□□□ -2.58
OTU1P43558 ATP6Q0085 780 nt-1.07□□□□□ -2.58
OTU1P43558 SKI7YOR076C 2244 nt-1.09□□□□□ -2.58
OTU1P43558 YDR102CYDR102C 333 nt-1.09□□□□□ -2.58
OTU1P43558 YFL032WYFL032W 321 nt-1.11□□□□□ -2.59
OTU1P43558 YDR183C-AYDR183C-A 258 nt-1.12□□□□□ -2.59
OTU1P43558 YFL019CYFL019C 354 nt-1.13□□□□□ -2.59
OTU1P43558 RDS3YPR094W 324 nt-1.14□□□□□ -2.59
OTU1P43558 YGL041CYGL041C 204 nt-1.17□□□□□ -2.6
OTU1P43558 PMP2YEL017C-A 132 nt-1.18□□□□□ -2.6
OTU1P43558 YMR172C-AYMR172C-A 384 nt-1.18□□□□□ -2.6
OTU1P43558 YER097WYER097W 330 nt-1.19□□□□□ -2.6
OTU1P43558 snR67snR67 82 nt-1.2□□□□□ -2.6
OTU1P43558 YEL014CYEL014C 306 nt-1.2□□□□□ -2.6
OTU1P43558 YOR008C-AYOR008C-A 225 nt-1.21□□□□□ -2.6
OTU1P43558 YPL038W-AYPL038W-A 192 nt-1.21□□□□□ -2.6
OTU1P43558 tM(CAU)Q2tM(CAU)Q2 78 nt-1.22□□□□□ -2.6
Retrieved 100 of 7,029 protein–RNA pairs in 91.1 ms