Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeastyeast

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKP2P42843 ROM2YLR371W 4071 nt1.37□□□□□ -2.19
SKP2P42843 EAF1YDR359C 2949 nt1.37□□□□□ -2.19
SKP2P42843 PET127YOR017W 2403 nt1.37□□□□□ -2.19
SKP2P42843 YDR524C-AYDR524C-A 120 nt1.36□□□□□ -2.19
SKP2P42843 YLL020CYLL020C 306 nt1.36□□□□□ -2.19
SKP2P42843 YOR314W-AYOR314W-A 111 nt1.36□□□□□ -2.19
SKP2P42843 YBR178WYBR178W 375 nt1.35□□□□□ -2.19
SKP2P42843 RAD9YDR217C 3930 nt1.35□□□□□ -2.19
SKP2P42843 KAP120YPL125W 3099 nt1.34□□□□□ -2.19
SKP2P42843 SIP4YJL089W 2490 nt1.33□□□□□ -2.2
SKP2P42843 YIL002W-AYIL002W-A 210 nt1.33□□□□□ -2.2
SKP2P42843 ASE1YOR058C 2658 nt1.32□□□□□ -2.2
SKP2P42843 QCR9YGR183C 201 nt1.32□□□□□ -2.2
SKP2P42843 YNL211CYNL211C 261 nt1.32□□□□□ -2.2
SKP2P42843 YOR161W-AYOR161W-A 81 nt1.32□□□□□ -2.2
SKP2P42843 YBR200W-AYBR200W-A 165 nt1.32□□□□□ -2.2
SKP2P42843 PRP5YBR237W 2550 nt1.32□□□□□ -2.2
SKP2P42843 PMP2YEL017C-A 132 nt1.31□□□□□ -2.2
SKP2P42843 YAL067W-AYAL067W-A 228 nt1.31□□□□□ -2.2
SKP2P42843 WAR1YML076C 2835 nt1.31□□□□□ -2.2
SKP2P42843 APL1YJR005W 2103 nt1.3□□□□□ -2.2
SKP2P42843 YCR095W-AYCR095W-A 159 nt1.29□□□□□ -2.2
SKP2P42843 YNL103W-AYNL103W-A 90 nt1.29□□□□□ -2.2
SKP2P42843 CMC4YMR194C-B 222 nt1.28□□□□□ -2.2
SKP2P42843 YBR099CYBR099C 384 nt1.28□□□□□ -2.2
SKP2P42843 NOP9YJL010C 2001 nt1.28□□□□□ -2.2
SKP2P42843 GEA2YEL022W 4380 nt1.28□□□□□ -2.21
SKP2P42843 TFB5YDR079C-A 219 nt1.27□□□□□ -2.21
SKP2P42843 YGL182CYGL182C 324 nt1.27□□□□□ -2.21
SKP2P42843 YGL123C-AYGL123C-A 231 nt1.26□□□□□ -2.21
SKP2P42843 CHS6YJL099W 2241 nt1.25□□□□□ -2.21
SKP2P42843 YDR544CYDR544C 429 nt1.25□□□□□ -2.21
SKP2P42843 OST4YDL232W 111 nt1.24□□□□□ -2.21
SKP2P42843 YBL039C-AYBL039C-A 84 nt1.24□□□□□ -2.21
SKP2P42843 snR39BsnR39B 96 nt1.24□□□□□ -2.21
SKP2P42843 PRP16YKR086W 3216 nt1.23□□□□□ -2.21
SKP2P42843 tF(GAA)BtF(GAA)B 73 nt1.23□□□□□ -2.21
SKP2P42843 tF(GAA)FtF(GAA)F 73 nt1.23□□□□□ -2.21
SKP2P42843 tF(GAA)GtF(GAA)G 73 nt1.23□□□□□ -2.21
SKP2P42843 tF(GAA)H1tF(GAA)H1 73 nt1.23□□□□□ -2.21
SKP2P42843 tF(GAA)H2tF(GAA)H2 73 nt1.23□□□□□ -2.21
SKP2P42843 tF(GAA)MtF(GAA)M 73 nt1.23□□□□□ -2.21
SKP2P42843 tF(GAA)P1tF(GAA)P1 73 nt1.23□□□□□ -2.21
SKP2P42843 tF(GAA)P2tF(GAA)P2 73 nt1.23□□□□□ -2.21
SKP2P42843 YNL284C-BYNL284C-B 5268 nt1.22□□□□□ -2.21
SKP2P42843 BFR2YDR299W 1605 nt1.22□□□□□ -2.21
SKP2P42843 UTP8YGR128C 2142 nt1.21□□□□□ -2.22
SKP2P42843 SMC1YFL008W 3678 nt1.2□□□□□ -2.22
SKP2P42843 TAH1YCR060W 336 nt1.2□□□□□ -2.22
SKP2P42843 YHR131W-AYHR131W-A 246 nt1.2□□□□□ -2.22
SKP2P42843 YLR282CYLR282C 342 nt1.2□□□□□ -2.22
SKP2P42843 YNL067W-BYNL067W-B 141 nt1.2□□□□□ -2.22
SKP2P42843 SOM1YEL059C-A 225 nt1.19□□□□□ -2.22
SKP2P42843 YDL073WYDL073W 2955 nt1.19□□□□□ -2.22
SKP2P42843 BUD3YCL014W 4911 nt1.18□□□□□ -2.22
SKP2P42843 NST1YNL091W 3723 nt1.17□□□□□ -2.22
SKP2P42843 COX5BYIL111W 456 nt1.17□□□□□ -2.22
SKP2P42843 RPL26BYGR034W 384 nt1.16□□□□□ -2.22
SKP2P42843 YMR326CYMR326C 309 nt1.16□□□□□ -2.22
SKP2P42843 RCO1YMR075W 2055 nt1.16□□□□□ -2.22
SKP2P42843 snR61snR61 90 nt1.14□□□□□ -2.23
SKP2P42843 YHR217CYHR217C 462 nt1.14□□□□□ -2.23
SKP2P42843 FYV10YIL097W 1551 nt1.13□□□□□ -2.23
SKP2P42843 YML002WYML002W 2214 nt1.12□□□□□ -2.23
SKP2P42843 YGL041C-BYGL041C-B 183 nt1.12□□□□□ -2.23
SKP2P42843 YLR041WYLR041W 321 nt1.12□□□□□ -2.23
SKP2P42843 snR190snR190 190 nt1.11□□□□□ -2.23
SKP2P42843 SPT7YBR081C 3999 nt1.11□□□□□ -2.23
SKP2P42843 COG6YNL041C 2520 nt1.1□□□□□ -2.23
SKP2P42843 YDR210WYDR210W 228 nt1.1□□□□□ -2.23
SKP2P42843 tM(CAU)Q2tM(CAU)Q2 78 nt1.1□□□□□ -2.23
SKP2P42843 YKL100W-AYKL100W-A 90 nt1.09□□□□□ -2.23
SKP2P42843 SEC8YPR055W 3198 nt1.07□□□□□ -2.24
SKP2P42843 YJR029WYJR029W 5268 nt1.07□□□□□ -2.24
SKP2P42843 YPR137C-BYPR137C-B 5268 nt1.07□□□□□ -2.24
SKP2P42843 YLR232WYLR232W 348 nt1.07□□□□□ -2.24
SKP2P42843 YPR160W-AYPR160W-A 81 nt1.07□□□□□ -2.24
SKP2P42843 UTP20YBL004W 7482 nt1.07□□□□□ -2.24
SKP2P42843 UBP3YER151C 2739 nt1.06□□□□□ -2.24
SKP2P42843 YOL014WYOL014W 375 nt1.06□□□□□ -2.24
SKP2P42843 YIL142C-AYIL142C-A 333 nt1.05□□□□□ -2.24
SKP2P42843 tN(GUU)QtN(GUU)Q 71 nt1.04□□□□□ -2.24
SKP2P42843 YJL127W-AYJL127W-A 117 nt1.04□□□□□ -2.24
SKP2P42843 SEC1YDR164C 2175 nt1.04□□□□□ -2.24
SKP2P42843 VAM6YDL077C 3150 nt1.03□□□□□ -2.24
SKP2P42843 YLR399W-AYLR399W-A 105 nt1.03□□□□□ -2.24
SKP2P42843 YDL247W-AYDL247W-A 75 nt1.02□□□□□ -2.25
SKP2P42843 YPR117WYPR117W 7470 nt1.02□□□□□ -2.25
SKP2P42843 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
SKP2P42843 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
SKP2P42843 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
SKP2P42843 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
SKP2P42843 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
SKP2P42843 RKR1YMR247C 4689 nt1□□□□□ -2.25
SKP2P42843 snR81snR81 201 nt0.99□□□□□ -2.25
SKP2P42843 SCC2YDR180W 4482 nt0.99□□□□□ -2.25
SKP2P42843 BEM2YER155C 6504 nt0.98□□□□□ -2.25
SKP2P42843 SBH1YER087C-B 249 nt0.98□□□□□ -2.25
SKP2P42843 tS(GCU)Q1tS(GCU)Q1 86 nt0.97□□□□□ -2.25
SKP2P42843 YNL266WYNL266W 420 nt0.97□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 43.5 ms