Protein–RNA interactions for Protein: P38798

NMD2, Nonsense-mediated mRNA decay protein 2, yeastyeast

Known RBP Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD2P38798 EMT5tM(CAU)J1 73 nt1.18□□□□□ -2.22
NMD2P38798 EMT3tM(CAU)J2 73 nt1.18□□□□□ -2.22
NMD2P38798 EMT4tM(CAU)M 73 nt1.18□□□□□ -2.22
NMD2P38798 EMT2tM(CAU)O2 73 nt1.18□□□□□ -2.22
NMD2P38798 YIL002W-AYIL002W-A 210 nt1.17□□□□□ -2.22
NMD2P38798 DOP1YDR141C 5097 nt1.16□□□□□ -2.22
NMD2P38798 YER053C-AYER053C-A 114 nt1.16□□□□□ -2.22
NMD2P38798 snR46snR46 197 nt1.16□□□□□ -2.22
NMD2P38798 RKR1YMR247C 4689 nt1.14□□□□□ -2.23
NMD2P38798 YLR041WYLR041W 321 nt1.13□□□□□ -2.23
NMD2P38798 PRP5YBR237W 2550 nt1.12□□□□□ -2.23
NMD2P38798 CHS6YJL099W 2241 nt1.12□□□□□ -2.23
NMD2P38798 FYV10YIL097W 1551 nt1.12□□□□□ -2.23
NMD2P38798 YNL337WYNL337W 255 nt1.1□□□□□ -2.23
NMD2P38798 YJL150WYJL150W 303 nt1.09□□□□□ -2.23
NMD2P38798 YJL182CYJL182C 318 nt1.09□□□□□ -2.23
NMD2P38798 PAU24YBR301W 363 nt1.09□□□□□ -2.23
NMD2P38798 snR52snR52 92 nt1.09□□□□□ -2.23
NMD2P38798 UTP20YBL004W 7482 nt1.06□□□□□ -2.24
NMD2P38798 PRP39YML046W 1890 nt1.05□□□□□ -2.24
NMD2P38798 PRP42YDR235W 1635 nt1.05□□□□□ -2.24
NMD2P38798 OST4YDL232W 111 nt1.05□□□□□ -2.24
NMD2P38798 tN(GUU)QtN(GUU)Q 71 nt1.05□□□□□ -2.24
NMD2P38798 LTE1YAL024C 4308 nt1.04□□□□□ -2.24
NMD2P38798 UTP8YGR128C 2142 nt1.04□□□□□ -2.24
NMD2P38798 SEC1YDR164C 2175 nt1.04□□□□□ -2.24
NMD2P38798 YNL198CYNL198C 303 nt1.03□□□□□ -2.24
NMD2P38798 YEL073CYEL073C 324 nt1.02□□□□□ -2.25
NMD2P38798 YHR131W-AYHR131W-A 246 nt1.02□□□□□ -2.25
NMD2P38798 YLR342W-AYLR342W-A 174 nt1.02□□□□□ -2.25
NMD2P38798 TRS65YGR166W 1683 nt1.01□□□□□ -2.25
NMD2P38798 YIL142C-AYIL142C-A 333 nt1□□□□□ -2.25
NMD2P38798 YSP1YHR155W 3687 nt1□□□□□ -2.25
NMD2P38798 YLR466C-BYLR466C-B 117 nt0.99□□□□□ -2.25
NMD2P38798 BEM3YPL115C 3387 nt0.99□□□□□ -2.25
NMD2P38798 YJL127W-AYJL127W-A 117 nt0.98□□□□□ -2.25
NMD2P38798 MYO1YHR023W 5787 nt0.98□□□□□ -2.25
NMD2P38798 SNU13YEL026W 381 nt0.96□□□□□ -2.26
NMD2P38798 TAH1YCR060W 336 nt0.94□□□□□ -2.26
NMD2P38798 YGL007C-AYGL007C-A 87 nt0.94□□□□□ -2.26
NMD2P38798 YBL039C-AYBL039C-A 84 nt0.94□□□□□ -2.26
NMD2P38798 YLR232WYLR232W 348 nt0.93□□□□□ -2.26
NMD2P38798 Q0032Q0032 291 nt0.92□□□□□ -2.26
NMD2P38798 YGL182CYGL182C 324 nt0.92□□□□□ -2.26
NMD2P38798 YGR151CYGR151C 336 nt0.92□□□□□ -2.26
NMD2P38798 YOR225WYOR225W 330 nt0.9□□□□□ -2.27
NMD2P38798 YOR381W-AYOR381W-A 168 nt0.9□□□□□ -2.27
NMD2P38798 YPR159C-AYPR159C-A 102 nt0.89□□□□□ -2.27
NMD2P38798 YMR160WYMR160W 2451 nt0.88□□□□□ -2.27
NMD2P38798 PET111YMR257C 2403 nt0.86□□□□□ -2.27
NMD2P38798 NNF2YGR089W 2811 nt0.86□□□□□ -2.27
NMD2P38798 tT(AGU)BtT(AGU)B 73 nt0.84□□□□□ -2.27
NMD2P38798 tT(AGU)CtT(AGU)C 73 nt0.84□□□□□ -2.27
NMD2P38798 tT(AGU)DtT(AGU)D 73 nt0.84□□□□□ -2.27
NMD2P38798 tT(AGU)HtT(AGU)H 73 nt0.84□□□□□ -2.27
NMD2P38798 tT(AGU)I1tT(AGU)I1 73 nt0.84□□□□□ -2.27
NMD2P38798 tT(AGU)I2tT(AGU)I2 73 nt0.84□□□□□ -2.27
NMD2P38798 tT(AGU)JtT(AGU)J 73 nt0.84□□□□□ -2.27
NMD2P38798 tT(AGU)N1tT(AGU)N1 73 nt0.84□□□□□ -2.27
NMD2P38798 tT(AGU)N2tT(AGU)N2 73 nt0.84□□□□□ -2.27
NMD2P38798 tT(AGU)O1tT(AGU)O1 73 nt0.84□□□□□ -2.27
NMD2P38798 tT(AGU)O2tT(AGU)O2 73 nt0.84□□□□□ -2.27
NMD2P38798 YNL338WYNL338W 159 nt0.84□□□□□ -2.27
NMD2P38798 YOR170WYOR170W 306 nt0.84□□□□□ -2.27
NMD2P38798 RPM2YML091C 3609 nt0.84□□□□□ -2.28
NMD2P38798 YDR544CYDR544C 429 nt0.82□□□□□ -2.28
NMD2P38798 YMR272W-AYMR272W-A 114 nt0.81□□□□□ -2.28
NMD2P38798 MLP1YKR095W 5628 nt0.8□□□□□ -2.28
NMD2P38798 tF(GAA)BtF(GAA)B 73 nt0.8□□□□□ -2.28
NMD2P38798 tF(GAA)FtF(GAA)F 73 nt0.8□□□□□ -2.28
NMD2P38798 tF(GAA)GtF(GAA)G 73 nt0.8□□□□□ -2.28
NMD2P38798 tF(GAA)H1tF(GAA)H1 73 nt0.8□□□□□ -2.28
NMD2P38798 tF(GAA)H2tF(GAA)H2 73 nt0.8□□□□□ -2.28
NMD2P38798 tF(GAA)MtF(GAA)M 73 nt0.8□□□□□ -2.28
NMD2P38798 tF(GAA)P1tF(GAA)P1 73 nt0.8□□□□□ -2.28
NMD2P38798 tF(GAA)P2tF(GAA)P2 73 nt0.8□□□□□ -2.28
NMD2P38798 YLL006W-AYLL006W-A 177 nt0.8□□□□□ -2.28
NMD2P38798 snR48snR48 113 nt0.8□□□□□ -2.28
NMD2P38798 YOR192C-BYOR192C-B 5313 nt0.8□□□□□ -2.28
NMD2P38798 PAU12YGR294W 363 nt0.79□□□□□ -2.28
NMD2P38798 YBR072C-AYBR072C-A 162 nt0.79□□□□□ -2.28
NMD2P38798 ULP2YIL031W 3105 nt0.78□□□□□ -2.28
NMD2P38798 YBL053WYBL053W 375 nt0.77□□□□□ -2.29
NMD2P38798 YLR294CYLR294C 330 nt0.76□□□□□ -2.29
NMD2P38798 YOR314W-AYOR314W-A 111 nt0.76□□□□□ -2.29
NMD2P38798 COG6YNL041C 2520 nt0.75□□□□□ -2.29
NMD2P38798 NIP1YMR309C 2439 nt0.75□□□□□ -2.29
NMD2P38798 YOR102WYOR102W 351 nt0.75□□□□□ -2.29
NMD2P38798 SDH6YDR379C-A 240 nt0.74□□□□□ -2.29
NMD2P38798 YHL015W-AYHL015W-A 84 nt0.74□□□□□ -2.29
NMD2P38798 GLG1YKR058W 1851 nt0.73□□□□□ -2.29
NMD2P38798 BUL2YML111W 2763 nt0.72□□□□□ -2.29
NMD2P38798 UTP10YJL109C 5310 nt0.72□□□□□ -2.29
NMD2P38798 tL(UAA)QtL(UAA)Q 85 nt0.72□□□□□ -2.29
NMD2P38798 RPS26AYGL189C 360 nt0.72□□□□□ -2.29
NMD2P38798 YOR329W-AYOR329W-A 210 nt0.72□□□□□ -2.29
NMD2P38798 IQG1YPL242C 4488 nt0.72□□□□□ -2.29
NMD2P38798 SBH1YER087C-B 249 nt0.71□□□□□ -2.3
NMD2P38798 QCR9YGR183C 201 nt0.71□□□□□ -2.3
NMD2P38798 YDR371C-AYDR371C-A 105 nt0.7□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms