Protein–RNA interactions for Protein: P38784

VMA22, Vacuolar ATPase assembly protein VMA22, yeastyeast

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA22P38784 CSE1YGL238W 2883 nt-0.16□□□□□ -2.43
VMA22P38784 snR60snR60 104 nt-0.16□□□□□ -2.44
VMA22P38784 YEL073CYEL073C 324 nt-0.16□□□□□ -2.44
VMA22P38784 YAL063C-AYAL063C-A 291 nt-0.16□□□□□ -2.44
VMA22P38784 YJL197C-AYJL197C-A 282 nt-0.17□□□□□ -2.44
VMA22P38784 YLL019W-AYLL019W-A 93 nt-0.17□□□□□ -2.44
VMA22P38784 YAL068W-AYAL068W-A 255 nt-0.17□□□□□ -2.44
VMA22P38784 YGR035CYGR035C 351 nt-0.18□□□□□ -2.44
VMA22P38784 snR8snR8 190 nt-0.19□□□□□ -2.44
VMA22P38784 YFL063WYFL063W 456 nt-0.19□□□□□ -2.44
VMA22P38784 UTP8YGR128C 2142 nt-0.2□□□□□ -2.44
VMA22P38784 YMR158W-BYMR158W-B 321 nt-0.21□□□□□ -2.44
VMA22P38784 YOR072W-BYOR072W-B 162 nt-0.21□□□□□ -2.44
VMA22P38784 SOV1YMR066W 2697 nt-0.21□□□□□ -2.44
VMA22P38784 TFB5YDR079C-A 219 nt-0.22□□□□□ -2.44
VMA22P38784 YLR041WYLR041W 321 nt-0.22□□□□□ -2.44
VMA22P38784 YMR193C-AYMR193C-A 387 nt-0.22□□□□□ -2.44
VMA22P38784 YOR293C-AYOR293C-A 150 nt-0.22□□□□□ -2.44
VMA22P38784 YIL032CYIL032C 357 nt-0.23□□□□□ -2.45
VMA22P38784 YER053C-AYER053C-A 114 nt-0.26□□□□□ -2.45
VMA22P38784 YPR016W-AYPR016W-A 261 nt-0.26□□□□□ -2.45
VMA22P38784 YBR099CYBR099C 384 nt-0.26□□□□□ -2.45
VMA22P38784 SBH2YER019C-A 267 nt-0.27□□□□□ -2.45
VMA22P38784 YLR154W-FYLR154W-F 141 nt-0.27□□□□□ -2.45
VMA22P38784 GLG1YKR058W 1851 nt-0.27□□□□□ -2.45
VMA22P38784 YNL028WYNL028W 318 nt-0.28□□□□□ -2.45
VMA22P38784 YDR210WYDR210W 228 nt-0.29□□□□□ -2.46
VMA22P38784 YGR069WYGR069W 336 nt-0.3□□□□□ -2.46
VMA22P38784 YGR164WYGR164W 336 nt-0.3□□□□□ -2.46
VMA22P38784 EST1YLR233C 2100 nt-0.31□□□□□ -2.46
VMA22P38784 HTL1YCR020W-B 237 nt-0.31□□□□□ -2.46
VMA22P38784 SDH6YDR379C-A 240 nt-0.32□□□□□ -2.46
VMA22P38784 YGL149WYGL149W 306 nt-0.32□□□□□ -2.46
VMA22P38784 snR46snR46 197 nt-0.33□□□□□ -2.46
VMA22P38784 RAD61YDR014W 1944 nt-0.33□□□□□ -2.46
VMA22P38784 YCR038W-AYCR038W-A 126 nt-0.34□□□□□ -2.46
VMA22P38784 YDR157WYDR157W 402 nt-0.34□□□□□ -2.46
VMA22P38784 APQ12YIL040W 417 nt-0.34□□□□□ -2.46
VMA22P38784 YIL002W-AYIL002W-A 210 nt-0.35□□□□□ -2.47
VMA22P38784 YDR544CYDR544C 429 nt-0.36□□□□□ -2.47
VMA22P38784 YAF9YNL107W 681 nt-0.36□□□□□ -2.47
VMA22P38784 YPL038W-AYPL038W-A 192 nt-0.36□□□□□ -2.47
VMA22P38784 YLR222C-AYLR222C-A 231 nt-0.38□□□□□ -2.47
VMA22P38784 snR36snR36 182 nt-0.38□□□□□ -2.47
VMA22P38784 HMRA1YCR097W 381 nt-0.39□□□□□ -2.47
VMA22P38784 TAH1YCR060W 336 nt-0.4□□□□□ -2.47
VMA22P38784 YDR102CYDR102C 333 nt-0.4□□□□□ -2.47
VMA22P38784 ATP6Q0085 780 nt-0.42□□□□□ -2.48
VMA22P38784 YLR120W-AYLR120W-A 102 nt-0.42□□□□□ -2.48
VMA22P38784 YOR015WYOR015W 360 nt-0.42□□□□□ -2.48
VMA22P38784 COG6YNL041C 2520 nt-0.43□□□□□ -2.48
VMA22P38784 YDR183C-AYDR183C-A 258 nt-0.44□□□□□ -2.48
VMA22P38784 snR74snR74 88 nt-0.45□□□□□ -2.48
VMA22P38784 YPR197CYPR197C 564 nt-0.45□□□□□ -2.48
VMA22P38784 VAR1Q0140 1197 nt-0.46□□□□□ -2.48
VMA22P38784 YIL071W-AYIL071W-A 477 nt-0.46□□□□□ -2.48
VMA22P38784 YGL052WYGL052W 306 nt-0.48□□□□□ -2.49
VMA22P38784 YFL032WYFL032W 321 nt-0.49□□□□□ -2.49
VMA22P38784 YIR030W-AYIR030W-A 384 nt-0.49□□□□□ -2.49
VMA22P38784 YPR170W-AYPR170W-A 186 nt-0.49□□□□□ -2.49
VMA22P38784 SEC10YLR166C 2616 nt-0.5□□□□□ -2.49
VMA22P38784 YBL039C-AYBL039C-A 84 nt-0.53□□□□□ -2.49
VMA22P38784 YMR172C-AYMR172C-A 384 nt-0.53□□□□□ -2.49
VMA22P38784 YOR008C-AYOR008C-A 225 nt-0.54□□□□□ -2.5
VMA22P38784 URB1YKL014C 5295 nt-0.55□□□□□ -2.5
VMA22P38784 YDL240C-AYDL240C-A 138 nt-0.55□□□□□ -2.5
VMA22P38784 PAU9YBL108C-A 129 nt-0.55□□□□□ -2.5
VMA22P38784 RPL39YJL189W 156 nt-0.56□□□□□ -2.5
VMA22P38784 YOR314W-AYOR314W-A 111 nt-0.56□□□□□ -2.5
VMA22P38784 YDR413CYDR413C 576 nt-0.57□□□□□ -2.5
VMA22P38784 YGL041CYGL041C 204 nt-0.57□□□□□ -2.5
VMA22P38784 YML099W-AYML099W-A 330 nt-0.57□□□□□ -2.5
VMA22P38784 YDR118W-AYDR118W-A 117 nt-0.58□□□□□ -2.5
VMA22P38784 YJL077W-AYJL077W-A 87 nt-0.58□□□□□ -2.5
VMA22P38784 YGL182CYGL182C 324 nt-0.59□□□□□ -2.5
VMA22P38784 YBR182C-AYBR182C-A 195 nt-0.59□□□□□ -2.5
VMA22P38784 Q0144Q0144 330 nt-0.6□□□□□ -2.51
VMA22P38784 tQ(UUG)QtQ(UUG)Q 76 nt-0.6□□□□□ -2.51
VMA22P38784 YDL007C-AYDL007C-A 258 nt-0.62□□□□□ -2.51
VMA22P38784 YKL118WYKL118W 312 nt-0.62□□□□□ -2.51
VMA22P38784 YPR012WYPR012W 255 nt-0.62□□□□□ -2.51
VMA22P38784 YML100W-AYML100W-A 174 nt-0.63□□□□□ -2.51
VMA22P38784 tA(UGC)QtA(UGC)Q 76 nt-0.64□□□□□ -2.51
VMA22P38784 tM(CAU)Q2tM(CAU)Q2 78 nt-0.64□□□□□ -2.51
VMA22P38784 YER097WYER097W 330 nt-0.65□□□□□ -2.51
VMA22P38784 YNL067W-BYNL067W-B 141 nt-0.65□□□□□ -2.51
VMA22P38784 GIM4YEL003W 336 nt-0.67□□□□□ -2.52
VMA22P38784 YEL014CYEL014C 306 nt-0.69□□□□□ -2.52
VMA22P38784 YFL019CYFL019C 354 nt-0.69□□□□□ -2.52
VMA22P38784 YPR010C-AYPR010C-A 219 nt-0.69□□□□□ -2.52
VMA22P38784 snR69snR69 101 nt-0.71□□□□□ -2.52
VMA22P38784 YNL277W-AYNL277W-A 189 nt-0.71□□□□□ -2.52
VMA22P38784 snR55snR55 98 nt-0.72□□□□□ -2.52
VMA22P38784 YER181CYER181C 324 nt-0.72□□□□□ -2.52
VMA22P38784 YOR381W-AYOR381W-A 168 nt-0.72□□□□□ -2.52
VMA22P38784 YBR131C-AYBR131C-A 90 nt-0.72□□□□□ -2.52
VMA22P38784 snR49snR49 165 nt-0.73□□□□□ -2.53
VMA22P38784 RPM2YML091C 3609 nt-0.74□□□□□ -2.53
VMA22P38784 tF(GAA)QtF(GAA)Q 75 nt-0.74□□□□□ -2.53
VMA22P38784 YJL182CYJL182C 318 nt-0.74□□□□□ -2.53
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms