Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 TFB5YDR079C-A 219 nt-0.34□□□□□ -2.46
LDB7P38210 BIL1YOR304C-A 231 nt-0.34□□□□□ -2.46
LDB7P38210 CSE1YGL238W 2883 nt-0.35□□□□□ -2.47
LDB7P38210 MYO1YHR023W 5787 nt-0.36□□□□□ -2.47
LDB7P38210 YJL197C-AYJL197C-A 282 nt-0.36□□□□□ -2.47
LDB7P38210 tW(UCA)QtW(UCA)Q 74 nt-0.37□□□□□ -2.47
LDB7P38210 YMR158W-BYMR158W-B 321 nt-0.38□□□□□ -2.47
LDB7P38210 YJL113WYJL113W 4647 nt-0.39□□□□□ -2.47
LDB7P38210 YAL063C-AYAL063C-A 291 nt-0.39□□□□□ -2.47
LDB7P38210 YBR099CYBR099C 384 nt-0.39□□□□□ -2.47
LDB7P38210 YGR164WYGR164W 336 nt-0.41□□□□□ -2.48
LDB7P38210 GLG1YKR058W 1851 nt-0.41□□□□□ -2.48
LDB7P38210 SBH2YER019C-A 267 nt-0.42□□□□□ -2.48
LDB7P38210 YLR264C-AYLR264C-A 117 nt-0.42□□□□□ -2.48
LDB7P38210 YMR193C-AYMR193C-A 387 nt-0.42□□□□□ -2.48
LDB7P38210 YLL019W-AYLL019W-A 93 nt-0.43□□□□□ -2.48
LDB7P38210 YAL068W-AYAL068W-A 255 nt-0.43□□□□□ -2.48
LDB7P38210 YDR210WYDR210W 228 nt-0.44□□□□□ -2.48
LDB7P38210 YGR035CYGR035C 351 nt-0.46□□□□□ -2.48
LDB7P38210 YGR069WYGR069W 336 nt-0.46□□□□□ -2.48
LDB7P38210 snR60snR60 104 nt-0.48□□□□□ -2.49
LDB7P38210 Q0017Q0017 162 nt-0.48□□□□□ -2.49
LDB7P38210 YOR072W-BYOR072W-B 162 nt-0.49□□□□□ -2.49
LDB7P38210 YPR016W-AYPR016W-A 261 nt-0.49□□□□□ -2.49
LDB7P38210 YER053C-AYER053C-A 114 nt-0.5□□□□□ -2.49
LDB7P38210 RAD61YDR014W 1944 nt-0.5□□□□□ -2.49
LDB7P38210 EST1YLR233C 2100 nt-0.51□□□□□ -2.49
LDB7P38210 HTL1YCR020W-B 237 nt-0.52□□□□□ -2.49
LDB7P38210 YJR157WYJR157W 363 nt-0.53□□□□□ -2.49
LDB7P38210 YIL032CYIL032C 357 nt-0.54□□□□□ -2.5
LDB7P38210 SDH6YDR379C-A 240 nt-0.55□□□□□ -2.5
LDB7P38210 RPM2YML091C 3609 nt-0.55□□□□□ -2.5
LDB7P38210 YIL002W-AYIL002W-A 210 nt-0.57□□□□□ -2.5
LDB7P38210 YNL028WYNL028W 318 nt-0.57□□□□□ -2.5
LDB7P38210 URB1YKL014C 5295 nt-0.59□□□□□ -2.5
LDB7P38210 YOR293C-AYOR293C-A 150 nt-0.59□□□□□ -2.5
LDB7P38210 snR46snR46 197 nt-0.59□□□□□ -2.5
LDB7P38210 SEC10YLR166C 2616 nt-0.6□□□□□ -2.51
LDB7P38210 HMRA1YCR097W 381 nt-0.6□□□□□ -2.51
LDB7P38210 APQ12YIL040W 417 nt-0.61□□□□□ -2.51
LDB7P38210 YLR154W-FYLR154W-F 141 nt-0.61□□□□□ -2.51
LDB7P38210 YIR030W-AYIR030W-A 384 nt-0.62□□□□□ -2.51
LDB7P38210 YPR170W-AYPR170W-A 186 nt-0.67□□□□□ -2.52
LDB7P38210 YCR038W-AYCR038W-A 126 nt-0.68□□□□□ -2.52
LDB7P38210 YGL149WYGL149W 306 nt-0.69□□□□□ -2.52
LDB7P38210 COG6YNL041C 2520 nt-0.71□□□□□ -2.52
LDB7P38210 TAH1YCR060W 336 nt-0.71□□□□□ -2.52
LDB7P38210 YDR102CYDR102C 333 nt-0.71□□□□□ -2.52
LDB7P38210 YDR183C-AYDR183C-A 258 nt-0.71□□□□□ -2.52
LDB7P38210 YLR120W-AYLR120W-A 102 nt-0.71□□□□□ -2.52
LDB7P38210 YOR015WYOR015W 360 nt-0.72□□□□□ -2.52
LDB7P38210 YDR157WYDR157W 402 nt-0.75□□□□□ -2.53
LDB7P38210 YDR544CYDR544C 429 nt-0.75□□□□□ -2.53
LDB7P38210 YIL071W-AYIL071W-A 477 nt-0.75□□□□□ -2.53
LDB7P38210 YAF9YNL107W 681 nt-0.75□□□□□ -2.53
LDB7P38210 snR36snR36 182 nt-0.76□□□□□ -2.53
LDB7P38210 YHL009W-BYHL009W-B 5409 nt-0.77□□□□□ -2.53
LDB7P38210 YLR222C-AYLR222C-A 231 nt-0.78□□□□□ -2.53
LDB7P38210 YPL038W-AYPL038W-A 192 nt-0.78□□□□□ -2.53
LDB7P38210 YPL060C-AYPL060C-A 3315 nt-0.79□□□□□ -2.54
LDB7P38210 ATP6Q0085 780 nt-0.79□□□□□ -2.54
LDB7P38210 snR74snR74 88 nt-0.8□□□□□ -2.54
LDB7P38210 YOR314W-AYOR314W-A 111 nt-0.83□□□□□ -2.54
LDB7P38210 YDL007C-AYDL007C-A 258 nt-0.84□□□□□ -2.54
LDB7P38210 YGL052WYGL052W 306 nt-0.84□□□□□ -2.54
LDB7P38210 YBL039C-AYBL039C-A 84 nt-0.84□□□□□ -2.54
LDB7P38210 YMR172C-AYMR172C-A 384 nt-0.84□□□□□ -2.54
LDB7P38210 YJL077W-AYJL077W-A 87 nt-0.85□□□□□ -2.55
LDB7P38210 YML100W-AYML100W-A 174 nt-0.85□□□□□ -2.55
LDB7P38210 tA(UGC)QtA(UGC)Q 76 nt-0.88□□□□□ -2.55
LDB7P38210 YNL067W-BYNL067W-B 141 nt-0.88□□□□□ -2.55
LDB7P38210 YPR197CYPR197C 564 nt-0.89□□□□□ -2.55
LDB7P38210 YML099W-AYML099W-A 330 nt-0.9□□□□□ -2.55
LDB7P38210 YOR008C-AYOR008C-A 225 nt-0.92□□□□□ -2.56
LDB7P38210 snR33snR33 183 nt-0.93□□□□□ -2.56
LDB7P38210 RPL39YJL189W 156 nt-0.94□□□□□ -2.56
LDB7P38210 YGL182CYGL182C 324 nt-0.95□□□□□ -2.56
LDB7P38210 YFL032WYFL032W 321 nt-0.96□□□□□ -2.56
LDB7P38210 PAU9YBL108C-A 129 nt-0.97□□□□□ -2.56
LDB7P38210 VAR1Q0140 1197 nt-0.98□□□□□ -2.57
LDB7P38210 YDR118W-AYDR118W-A 117 nt-0.99□□□□□ -2.57
LDB7P38210 YDL240C-AYDL240C-A 138 nt-1□□□□□ -2.57
LDB7P38210 YBR182C-AYBR182C-A 195 nt-1□□□□□ -2.57
LDB7P38210 YGL041CYGL041C 204 nt-1.02□□□□□ -2.57
LDB7P38210 tQ(UUG)QtQ(UUG)Q 76 nt-1.03□□□□□ -2.57
LDB7P38210 tT(UGU)G1tT(UGU)G1 72 nt-1.05□□□□□ -2.58
LDB7P38210 tT(UGU)G2tT(UGU)G2 72 nt-1.05□□□□□ -2.58
LDB7P38210 tT(UGU)PtT(UGU)P 72 nt-1.05□□□□□ -2.58
LDB7P38210 YPR012WYPR012W 255 nt-1.07□□□□□ -2.58
LDB7P38210 YDR413CYDR413C 576 nt-1.08□□□□□ -2.58
LDB7P38210 YJL182CYJL182C 318 nt-1.08□□□□□ -2.58
LDB7P38210 YPR010C-AYPR010C-A 219 nt-1.08□□□□□ -2.58
LDB7P38210 snR69snR69 101 nt-1.09□□□□□ -2.58
LDB7P38210 YKL118WYKL118W 312 nt-1.09□□□□□ -2.58
LDB7P38210 YER097WYER097W 330 nt-1.1□□□□□ -2.59
LDB7P38210 tM(CAU)Q2tM(CAU)Q2 78 nt-1.11□□□□□ -2.59
LDB7P38210 YER181CYER181C 324 nt-1.12□□□□□ -2.59
LDB7P38210 tF(GAA)QtF(GAA)Q 75 nt-1.13□□□□□ -2.59
LDB7P38210 YOR381W-AYOR381W-A 168 nt-1.13□□□□□ -2.59
LDB7P38210 snR49snR49 165 nt-1.13□□□□□ -2.59
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms