Protein–RNA interactions for Protein: P38181

NUP170, Nucleoporin NUP170, yeastyeast

Predictions only

Length 1,502 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP170P38181 YDR220CYDR220C 294 nt-3.33□□□□□ -2.94
NUP170P38181 YNL146C-AYNL146C-A 195 nt-3.34□□□□□ -2.94
NUP170P38181 YKL044WYKL044W 321 nt-3.35□□□□□ -2.95
NUP170P38181 YKL083WYKL083W 615 nt-3.36□□□□□ -2.95
NUP170P38181 YMR315W-AYMR315W-A 108 nt-3.36□□□□□ -2.95
NUP170P38181 YNL171CYNL171C 369 nt-3.36□□□□□ -2.95
NUP170P38181 YNL303WYNL303W 348 nt-3.36□□□□□ -2.95
NUP170P38181 BUD26YDR241W 288 nt-3.38□□□□□ -2.95
NUP170P38181 YMR193C-AYMR193C-A 387 nt-3.4□□□□□ -2.95
NUP170P38181 YER090C-AYER090C-A 90 nt-3.41□□□□□ -2.96
NUP170P38181 YMR013C-AYMR013C-A 150 nt-3.41□□□□□ -2.96
NUP170P38181 YAF9YNL107W 681 nt-3.42□□□□□ -2.96
NUP170P38181 BI2Q0110 1272 nt-3.43□□□□□ -2.96
NUP170P38181 tQ(UUG)QtQ(UUG)Q 76 nt-3.43□□□□□ -2.96
NUP170P38181 YEL020C-BYEL020C-B 198 nt-3.44□□□□□ -2.96
NUP170P38181 YHR007C-AYHR007C-A 216 nt-3.44□□□□□ -2.96
NUP170P38181 YPR039WYPR039W 336 nt-3.45□□□□□ -2.96
NUP170P38181 YFL012WYFL012W 447 nt-3.46□□□□□ -2.96
NUP170P38181 RPS27BYHR021C 249 nt-3.47□□□□□ -2.96
NUP170P38181 YHR050W-AYHR050W-A 171 nt-3.47□□□□□ -2.96
NUP170P38181 MRPL32YCR003W 552 nt-3.48□□□□□ -2.97
NUP170P38181 YNL266WYNL266W 420 nt-3.48□□□□□ -2.97
NUP170P38181 YML054C-AYML054C-A 159 nt-3.49□□□□□ -2.97
NUP170P38181 YPR002C-AYPR002C-A 198 nt-3.49□□□□□ -2.97
NUP170P38181 YLR202CYLR202C 327 nt-3.5□□□□□ -2.97
NUP170P38181 RPS30AYLR287C-A 192 nt-3.5□□□□□ -2.97
NUP170P38181 YIR021W-AYIR021W-A 213 nt-3.54□□□□□ -2.98
NUP170P38181 PRM3YPL192C 402 nt-3.54□□□□□ -2.98
NUP170P38181 POP6YGR030C 477 nt-3.6□□□□□ -2.98
NUP170P38181 YDR048CYDR048C 315 nt-3.61□□□□□ -2.99
NUP170P38181 snR50snR50 90 nt-3.61□□□□□ -2.99
NUP170P38181 YDR426CYDR426C 378 nt-3.65□□□□□ -2.99
NUP170P38181 YGR270C-AYGR270C-A 219 nt-3.65□□□□□ -2.99
NUP170P38181 TOM22YNL131W 459 nt-3.65□□□□□ -2.99
NUP170P38181 YOR309CYOR309C 381 nt-3.65□□□□□ -2.99
NUP170P38181 YMR172C-AYMR172C-A 384 nt-3.69□□□□□ -3
NUP170P38181 GPI15YNL038W 690 nt-3.69□□□□□ -3
NUP170P38181 YDR544CYDR544C 429 nt-3.72□□□□□ -3.01
NUP170P38181 IRC13YOR235W 315 nt-3.73□□□□□ -3.01
NUP170P38181 YDL011CYDL011C 324 nt-3.75□□□□□ -3.01
NUP170P38181 YLR163W-AYLR163W-A 114 nt-3.79□□□□□ -3.02
NUP170P38181 snR67snR67 82 nt-3.82□□□□□ -3.02
NUP170P38181 snR69snR69 101 nt-3.82□□□□□ -3.02
NUP170P38181 YGR069WYGR069W 336 nt-3.84□□□□□ -3.02
NUP170P38181 ATP19YOL077W-A 207 nt-3.85□□□□□ -3.03
NUP170P38181 YOR314W-AYOR314W-A 111 nt-3.85□□□□□ -3.03
NUP170P38181 YML099W-AYML099W-A 330 nt-3.89□□□□□ -3.03
NUP170P38181 YLR269CYLR269C 351 nt-3.9□□□□□ -3.03
NUP170P38181 YOL083C-AYOL083C-A 141 nt-3.9□□□□□ -3.03
NUP170P38181 YJR162CYJR162C 351 nt-3.97□□□□□ -3.05
NUP170P38181 YNL337WYNL337W 255 nt-3.97□□□□□ -3.05
NUP170P38181 PCC1YKR095W-A 267 nt-3.99□□□□□ -3.05
NUP170P38181 YOR008C-AYOR008C-A 225 nt-3.99□□□□□ -3.05
NUP170P38181 snR57snR57 88 nt-4□□□□□ -3.05
NUP170P38181 YDR524W-CYDR524W-C 90 nt-4.02□□□□□ -3.05
NUP170P38181 YDR102CYDR102C 333 nt-4.05□□□□□ -3.06
NUP170P38181 YGL149WYGL149W 306 nt-4.05□□□□□ -3.06
NUP170P38181 TSC3YBR058C-A 243 nt-4.05□□□□□ -3.06
NUP170P38181 YLR217WYLR217W 324 nt-4.07□□□□□ -3.06
NUP170P38181 YBL071CYBL071C 309 nt-4.07□□□□□ -3.06
NUP170P38181 snR9snR9 187 nt-4.08□□□□□ -3.06
NUP170P38181 HMRA1YCR097W 381 nt-4.11□□□□□ -3.07
NUP170P38181 YLL019W-AYLL019W-A 93 nt-4.13□□□□□ -3.07
NUP170P38181 YBR182C-AYBR182C-A 195 nt-4.16□□□□□ -3.07
NUP170P38181 YLR342W-AYLR342W-A 174 nt-4.16□□□□□ -3.08
NUP170P38181 YJL197C-AYJL197C-A 282 nt-4.2□□□□□ -3.08
NUP170P38181 YIL029CYIL029C 429 nt-4.21□□□□□ -3.08
NUP170P38181 YER175W-AYER175W-A 165 nt-4.21□□□□□ -3.08
NUP170P38181 YGR174W-AYGR174W-A 87 nt-4.22□□□□□ -3.09
NUP170P38181 AI5_BETAQ0075 1065 nt-4.23□□□□□ -3.09
NUP170P38181 YER137W-AYER137W-A 306 nt-4.23□□□□□ -3.09
NUP170P38181 YOR376W-AYOR376W-A 156 nt-4.3□□□□□ -3.1
NUP170P38181 YDL158CYDL158C 309 nt-4.33□□□□□ -3.1
NUP170P38181 ATG16YMR159C 453 nt-4.34□□□□□ -3.1
NUP170P38181 YDL016CYDL016C 303 nt-4.37□□□□□ -3.11
NUP170P38181 YLR286W-AYLR286W-A 135 nt-4.39□□□□□ -3.11
NUP170P38181 tD(GUC)QtD(GUC)Q 75 nt-4.44□□□□□ -3.12
NUP170P38181 YER097WYER097W 330 nt-4.46□□□□□ -3.12
NUP170P38181 YIL115W-AYIL115W-A 372 nt-4.47□□□□□ -3.13
NUP170P38181 YAR047CYAR047C 321 nt-4.51□□□□□ -3.13
NUP170P38181 YGR146C-AYGR146C-A 162 nt-4.55□□□□□ -3.14
NUP170P38181 YOR316C-AYOR316C-A 210 nt-4.56□□□□□ -3.14
NUP170P38181 YOR072W-BYOR072W-B 162 nt-4.57□□□□□ -3.14
NUP170P38181 YDL159C-BYDL159C-B 177 nt-4.58□□□□□ -3.14
NUP170P38181 YPR197CYPR197C 564 nt-4.64□□□□□ -3.15
NUP170P38181 YBR196C-AYBR196C-A 150 nt-4.67□□□□□ -3.16
NUP170P38181 CSN9YDR179C 489 nt-4.72□□□□□ -3.16
NUP170P38181 YER181CYER181C 324 nt-4.72□□□□□ -3.16
NUP170P38181 YFL019CYFL019C 354 nt-4.73□□□□□ -3.17
NUP170P38181 YFL032WYFL032W 321 nt-4.75□□□□□ -3.17
NUP170P38181 YBR178WYBR178W 375 nt-4.77□□□□□ -3.17
NUP170P38181 snR55snR55 98 nt-4.77□□□□□ -3.17
NUP170P38181 snR6snR6 112 nt-4.77□□□□□ -3.17
NUP170P38181 tM(CAU)Q2tM(CAU)Q2 78 nt-4.77□□□□□ -3.17
NUP170P38181 YLR406C-AYLR406C-A 150 nt-4.77□□□□□ -3.17
NUP170P38181 MPC1YGL080W 393 nt-4.8□□□□□ -3.18
NUP170P38181 YJR157WYJR157W 363 nt-4.82□□□□□ -3.18
NUP170P38181 YOL155W-AYOL155W-A 135 nt-4.87□□□□□ -3.19
NUP170P38181 snR41snR41 95 nt-4.87□□□□□ -3.19
NUP170P38181 YPR012WYPR012W 255 nt-4.89□□□□□ -3.19
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms